RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 PDXDC2PQ6P474 469 aa8.59□□□□□ -1.03
CCNDBP1-207ENST00000565958 TBC1D9Q6ZT07 1266 aa8.59□□□□□ -1.03
CCNDBP1-207ENST00000565958 GMCL1Q96IK5 515 aa8.59□□□□□ -1.03
CCNDBP1-207ENST00000565958 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
CCNDBP1-207ENST00000565958 CUEDC1Q9NWM3 386 aaPredicted RBP8.59□□□□□ -1.03
CCNDBP1-207ENST00000565958 TMEM88BA6NKF7 163 aa8.58□□□□□ -1.04
CCNDBP1-207ENST00000565958 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
CCNDBP1-207ENST00000565958 FOXR1Q6PIV2 292 aa8.58□□□□□ -1.04
CCNDBP1-207ENST00000565958 VRTNQ9H8Y1 702 aa8.58□□□□□ -1.04
CCNDBP1-207ENST00000565958 INTS6LQ5JSJ4 861 aaKnown RBP8.57□□□□□ -1.04
CCNDBP1-207ENST00000565958 LYSMD3Q7Z3D4 306 aa8.57□□□□□ -1.04
CCNDBP1-207ENST00000565958 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
CCNDBP1-207ENST00000565958 IGF1RP08069 1367 aa8.57□□□□□ -1.04
CCNDBP1-207ENST00000565958 FBXO45P0C2W1 286 aa8.56□□□□□ -1.04
CCNDBP1-207ENST00000565958 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
CCNDBP1-207ENST00000565958 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
CCNDBP1-207ENST00000565958 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
CCNDBP1-207ENST00000565958 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
CCNDBP1-207ENST00000565958 LRRC4BQ9NT99 713 aa8.56□□□□□ -1.04
CCNDBP1-207ENST00000565958 ZBBXA8MT70 800 aa8.55□□□□□ -1.04
CCNDBP1-207ENST00000565958 TRIM22Q8IYM9 498 aa8.55□□□□□ -1.04
CCNDBP1-207ENST00000565958 Q8N3U1 123 aa8.55□□□□□ -1.04
CCNDBP1-207ENST00000565958 ADH1AP07327 375 aa8.54□□□□□ -1.04
CCNDBP1-207ENST00000565958 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
CCNDBP1-207ENST00000565958 ZNF837Q96EG3 531 aaPredicted RBP8.54□□□□□ -1.04
CCNDBP1-207ENST00000565958 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
CCNDBP1-207ENST00000565958 FKBPLQ9UIM3 349 aa8.54□□□□□ -1.04
CCNDBP1-207ENST00000565958 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
CCNDBP1-207ENST00000565958 PTGIRP43119 386 aa8.53□□□□□ -1.04
CCNDBP1-207ENST00000565958 BAG6P46379 1132 aa8.53□□□□□ -1.04
CCNDBP1-207ENST00000565958 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
CCNDBP1-207ENST00000565958 SND1Q7KZF4 910 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCNDBP1-207ENST00000565958 RBM25P49756 843 aaKnown RBP8.52□□□□□ -1.05
CCNDBP1-207ENST00000565958 ELOAQ14241 798 aaKnown RBP8.52□□□□□ -1.05
CCNDBP1-207ENST00000565958 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
CCNDBP1-207ENST00000565958 ACDQ96AP0 544 aa8.52□□□□□ -1.05
CCNDBP1-207ENST00000565958 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 ZNF784Q8NCA9 323 aaPredicted RBP8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 TMPRSS4Q9NRS4 437 aa8.51□□□□□ -1.05
CCNDBP1-207ENST00000565958 GPR25O00155 361 aa8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 NBPF20Q3BBV1 942 aa8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 PRICKLE2Q7Z3G6 844 aa8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 ZMIZ1Q9ULJ6 1067 aa8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 GNEQ9Y223 722 aaKnown RBP8.5□□□□□ -1.05
CCNDBP1-207ENST00000565958 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 H7C1W4 665 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 SKIP12755 728 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 ADD1P35611 737 aaKnown RBP8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 RNF144AP50876 292 aaPredicted RBP8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 PTK2Q05397 1052 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 DBN1Q16643 649 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 TMEM164Q5U3C3 297 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 STK32AQ8WU08 396 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 TRERF1Q96PN7 1200 aa8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 NOVA2Q9UNW9 492 aaKnown RBP8.49□□□□□ -1.05
CCNDBP1-207ENST00000565958 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 LILRA1O75019 489 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 RHOQP17081 205 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 RIPOR1Q6ZS17 1223 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 ZNF592Q92610 1267 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 ZNF428Q96B54 188 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 KRTAP9-2Q9BYQ4 174 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 GPSM3Q9Y4H4 160 aa8.48□□□□□ -1.05
CCNDBP1-207ENST00000565958 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
CCNDBP1-207ENST00000565958 OIP5O43482 229 aa8.47□□□□□ -1.05
CCNDBP1-207ENST00000565958 FAM196BA6NMK8 535 aa8.46□□□□□ -1.06
CCNDBP1-207ENST00000565958 FURINP09958 794 aa8.46□□□□□ -1.06
CCNDBP1-207ENST00000565958 MX2P20592 715 aa8.46□□□□□ -1.06
CCNDBP1-207ENST00000565958 ADAM32Q8TC27 787 aa8.46□□□□□ -1.06
CCNDBP1-207ENST00000565958 GTPBP3Q969Y2 492 aaKnown RBP8.46□□□□□ -1.06
CCNDBP1-207ENST00000565958 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L21D6R901 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 ERVH48-1M5A8F1 160 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 RAB15P59190 212 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 DEPDC4Q8N2C3 294 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 CCER1Q8TC90 406 aaPredicted RBP8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 OCSTAMPQ9BR26 566 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 MKL2Q9ULH7 1088 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 AMOTL2Q9Y2J4 779 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 DYRK1BQ9Y463 629 aa8.45□□□□□ -1.06
CCNDBP1-207ENST00000565958 GPC1P35052 558 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms