RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TSPYL6Q8N831 410 aa24.17■■□□□ 1.46
COMMD4-213ENST00000565834 DDB1Q16531 1140 aa24.16■■□□□ 1.46
COMMD4-213ENST00000565834 ZNF428Q96B54 188 aa24.16■■□□□ 1.46
COMMD4-213ENST00000565834 ELL2O00472 640 aaPredicted RBP24.15■■□□□ 1.46
COMMD4-213ENST00000565834 BCAR3O75815 825 aa24.15■■□□□ 1.46
COMMD4-213ENST00000565834 VAMP4O75379 141 aa24.15■■□□□ 1.46
COMMD4-213ENST00000565834 FAM98CQ17RN3 349 aaKnown RBP24.14■■□□□ 1.45
COMMD4-213ENST00000565834 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.14■■□□□ 1.45
COMMD4-213ENST00000565834 ATRNO75882 1429 aa24.14■■□□□ 1.45
COMMD4-213ENST00000565834 TOGARAM1Q9Y4F4 1720 aa24.14■■□□□ 1.45
COMMD4-213ENST00000565834 ERVV-2B6SEH9 535 aa24.13■■□□□ 1.45
COMMD4-213ENST00000565834 CABP4P57796 275 aa24.13■■□□□ 1.45
COMMD4-213ENST00000565834 FKBP8Q14318 412 aa24.13■■□□□ 1.45
COMMD4-213ENST00000565834 KRT24Q2M2I5 525 aa24.13■■□□□ 1.45
COMMD4-213ENST00000565834 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
COMMD4-213ENST00000565834 TRPC5Q9UL62 973 aaPredicted RBP24.13■■□□□ 1.45
COMMD4-213ENST00000565834 GLI3P10071 1580 aa24.12■■□□□ 1.45
COMMD4-213ENST00000565834 IRX6P78412 446 aaPredicted RBP24.12■■□□□ 1.45
COMMD4-213ENST00000565834 ALDH1L2Q3SY69 923 aa24.11■■□□□ 1.45
COMMD4-213ENST00000565834 BCL2L13Q9BXK5 485 aa24.11■■□□□ 1.45
COMMD4-213ENST00000565834 SMC4Q9NTJ3 1288 aa24.11■■□□□ 1.45
COMMD4-213ENST00000565834 SSH1Q8WYL5 1049 aa24.11■■□□□ 1.45
COMMD4-213ENST00000565834 GJD4Q96KN9 370 aaPredicted RBP24.11■■□□□ 1.45
COMMD4-213ENST00000565834 THSD7AQ9UPZ6 1657 aa24.1■■□□□ 1.45
COMMD4-213ENST00000565834 PLIN1O60240 522 aa24.1■■□□□ 1.45
COMMD4-213ENST00000565834 KAT6BQ8WYB5 2073 aa24.09■■□□□ 1.45
COMMD4-213ENST00000565834 EIF4A1P60842 406 aaKnown RBP24.09■■□□□ 1.45
COMMD4-213ENST00000565834 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
COMMD4-213ENST00000565834 ITGB4P16144 1822 aa24.08■■□□□ 1.45
COMMD4-213ENST00000565834 KCNQ3O43525 872 aa24.08■■□□□ 1.45
COMMD4-213ENST00000565834 A0A0G2JS52 829 aa24.07■■□□□ 1.44
COMMD4-213ENST00000565834 CANXP27824 592 aaKnown RBP24.07■■□□□ 1.44
COMMD4-213ENST00000565834 MYT1Q01538 1121 aa24.07■■□□□ 1.44
COMMD4-213ENST00000565834 ZNF790Q6PG37 636 aa24.06■■□□□ 1.44
COMMD4-213ENST00000565834 DOT1LQ8TEK3 1739 aa24.06■■□□□ 1.44
COMMD4-213ENST00000565834 FRAT1Q92837 279 aaPredicted RBP24.05■■□□□ 1.44
COMMD4-213ENST00000565834 QTRT2Q9H974 415 aaKnown RBP24.05■■□□□ 1.44
COMMD4-213ENST00000565834 PAPPAQ13219 1627 aa24.05■■□□□ 1.44
COMMD4-213ENST00000565834 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
COMMD4-213ENST00000565834 MARCH10Q8NA82 808 aaPredicted RBP24.05■■□□□ 1.44
COMMD4-213ENST00000565834 TMOD3Q9NYL9 352 aa24.05■■□□□ 1.44
COMMD4-213ENST00000565834 KIF16BQ96L93 1317 aa24.04■■□□□ 1.44
COMMD4-213ENST00000565834 TTC5Q8N0Z6 440 aa24.04■■□□□ 1.44
COMMD4-213ENST00000565834 HOXB7P09629 217 aa24.03■■□□□ 1.44
COMMD4-213ENST00000565834 BRPF1P55201 1214 aaPredicted RBP24.03■■□□□ 1.44
COMMD4-213ENST00000565834 CACNA1FO60840 1977 aa24.03■■□□□ 1.44
COMMD4-213ENST00000565834 MRPL50Q8N5N7 158 aaKnown RBP24.02■■□□□ 1.44
COMMD4-213ENST00000565834 UBR2Q8IWV8 1755 aa24.02■■□□□ 1.44
COMMD4-213ENST00000565834 HEG1Q9ULI3 1381 aa24.02■■□□□ 1.44
COMMD4-213ENST00000565834 TCERG1O14776 1098 aaKnown RBP24.02■■□□□ 1.44
COMMD4-213ENST00000565834 ZNF772Q68DY9 489 aaPredicted RBP24.02■■□□□ 1.44
COMMD4-213ENST00000565834 ERICH6BQ5W0A0 696 aa24■■□□□ 1.43
COMMD4-213ENST00000565834 ZKSCAN2Q63HK3 967 aa24■■□□□ 1.43
COMMD4-213ENST00000565834 CHMP4AQ9BY43 222 aa24■■□□□ 1.43
COMMD4-213ENST00000565834 ONECUT3O60422 494 aaPredicted RBP23.99■■□□□ 1.43
COMMD4-213ENST00000565834 CCDC30Q5VVM6 783 aa23.99■■□□□ 1.43
COMMD4-213ENST00000565834 IPO8O15397 1037 aaKnown RBP23.99■■□□□ 1.43
COMMD4-213ENST00000565834 GIGYF1O75420 1035 aaPredicted RBP23.99■■□□□ 1.43
COMMD4-213ENST00000565834 C20orf194Q5TEA3 1177 aa23.99■■□□□ 1.43
COMMD4-213ENST00000565834 HDGFL1Q5TGJ6 251 aa23.99■■□□□ 1.43
COMMD4-213ENST00000565834 FMNL2Q96PY5 1086 aa23.99■■□□□ 1.43
COMMD4-213ENST00000565834 NOB1Q9ULX3 412 aaKnown RBP23.99■■□□□ 1.43
COMMD4-213ENST00000565834 C5P01031 1676 aa23.98■■□□□ 1.43
COMMD4-213ENST00000565834 BCL9O00512 1426 aa23.98■■□□□ 1.43
COMMD4-213ENST00000565834 PDE3AQ14432 1141 aa23.98■■□□□ 1.43
COMMD4-213ENST00000565834 PIGBQ92521 554 aa23.98■■□□□ 1.43
COMMD4-213ENST00000565834 ZNF496Q96IT1 587 aaPredicted RBP23.98■■□□□ 1.43
COMMD4-213ENST00000565834 STK31Q9BXU1 1019 aa23.98■■□□□ 1.43
COMMD4-213ENST00000565834 SYTL4Q96C24 671 aaPredicted RBP23.97■■□□□ 1.43
COMMD4-213ENST00000565834 NECTIN2Q92692 538 aa23.96■■□□□ 1.43
COMMD4-213ENST00000565834 KCPQ6ZWJ8 1503 aa23.96■■□□□ 1.43
COMMD4-213ENST00000565834 PRIM1P49642 420 aaKnown RBP23.95■■□□□ 1.43
COMMD4-213ENST00000565834 SEPT12Q8IYM1 358 aa23.95■■□□□ 1.43
COMMD4-213ENST00000565834 SLC4A2P04920 1241 aa23.95■■□□□ 1.42
COMMD4-213ENST00000565834 MS4A1P11836 297 aa23.95■■□□□ 1.42
COMMD4-213ENST00000565834 EIF2S2P20042 333 aaKnown RBP23.95■■□□□ 1.42
COMMD4-213ENST00000565834 ATF7IPQ6VMQ6 1270 aa23.95■■□□□ 1.42
COMMD4-213ENST00000565834 LAMB4A4D0S4 1761 aa23.94■■□□□ 1.42
COMMD4-213ENST00000565834 ARHGAP45Q92619 1136 aa23.94■■□□□ 1.42
COMMD4-213ENST00000565834 SNRPA1P09661 255 aaKnown RBP23.93■■□□□ 1.42
COMMD4-213ENST00000565834 TRIM27P14373 513 aa23.93■■□□□ 1.42
COMMD4-213ENST00000565834 ACSBG1Q96GR2 724 aa23.93■■□□□ 1.42
COMMD4-213ENST00000565834 CRBNQ96SW2 442 aa23.93■■□□□ 1.42
COMMD4-213ENST00000565834 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
COMMD4-213ENST00000565834 FTSJ3Q8IY81 847 aaKnown RBP23.92■■□□□ 1.42
COMMD4-213ENST00000565834 PANK1Q8TE04 598 aa23.92■■□□□ 1.42
COMMD4-213ENST00000565834 TNNQ9UQP3 1299 aa23.92■■□□□ 1.42
COMMD4-213ENST00000565834 RBM6P78332 1123 aaKnown RBP23.92■■□□□ 1.42
COMMD4-213ENST00000565834 DZIP1LQ8IYY4 767 aaKnown RBP23.92■■□□□ 1.42
COMMD4-213ENST00000565834 EXOC6Q8TAG9 804 aa23.92■■□□□ 1.42
COMMD4-213ENST00000565834 CLUAP1Q96AJ1 413 aa23.92■■□□□ 1.42
COMMD4-213ENST00000565834 ASAP1Q9ULH1 1129 aa23.92■■□□□ 1.42
COMMD4-213ENST00000565834 ATG3Q9NT62 314 aa23.91■■□□□ 1.42
COMMD4-213ENST00000565834 BRWD3Q6RI45 1802 aa23.9■■□□□ 1.42
COMMD4-213ENST00000565834 PTCD1O75127 700 aaKnown RBP23.9■■□□□ 1.42
COMMD4-213ENST00000565834 PTPRCP08575 1304 aa23.9■■□□□ 1.42
COMMD4-213ENST00000565834 RLBP1P12271 317 aa23.89■■□□□ 1.42
COMMD4-213ENST00000565834 API5Q9BZZ5 524 aaKnown RBP23.89■■□□□ 1.42
COMMD4-213ENST00000565834 CHPF2Q9P2E5 772 aa23.89■■□□□ 1.41
COMMD4-213ENST00000565834 DBF4Q9UBU7 674 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms