RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
CDH13-207ENST00000565636 RBM46Q8TBY0 533 aaKnown RBP12.23□□□□□ -0.45
CDH13-207ENST00000565636 PLEKHH1Q9ULM0 1364 aa12.22□□□□□ -0.45
CDH13-207ENST00000565636 PTGDRQ13258 359 aa12.22□□□□□ -0.45
CDH13-207ENST00000565636 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
CDH13-207ENST00000565636 EYA1Q99502 592 aa12.21□□□□□ -0.45
CDH13-207ENST00000565636 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
CDH13-207ENST00000565636 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.46
CDH13-207ENST00000565636 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
CDH13-207ENST00000565636 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
CDH13-207ENST00000565636 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
CDH13-207ENST00000565636 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
CDH13-207ENST00000565636 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
CDH13-207ENST00000565636 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
CDH13-207ENST00000565636 POGKQ9P215 609 aa12.2□□□□□ -0.46
CDH13-207ENST00000565636 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
CDH13-207ENST00000565636 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
CDH13-207ENST00000565636 DNAJB2P25686 324 aa12.19□□□□□ -0.46
CDH13-207ENST00000565636 APLP1P51693 650 aa12.19□□□□□ -0.46
CDH13-207ENST00000565636 SMYD5Q6GMV2 418 aa12.19□□□□□ -0.46
CDH13-207ENST00000565636 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
CDH13-207ENST00000565636 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
CDH13-207ENST00000565636 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
CDH13-207ENST00000565636 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
CDH13-207ENST00000565636 FCHSD2O94868 740 aa12.18□□□□□ -0.46
CDH13-207ENST00000565636 GGCXP38435 758 aa12.18□□□□□ -0.46
CDH13-207ENST00000565636 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
CDH13-207ENST00000565636 ADGRB1O14514 1584 aa12.18□□□□□ -0.46
CDH13-207ENST00000565636 LRP5O75197 1615 aa12.16□□□□□ -0.46
CDH13-207ENST00000565636 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
CDH13-207ENST00000565636 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
CDH13-207ENST00000565636 BAG6P46379 1132 aa12.16□□□□□ -0.46
CDH13-207ENST00000565636 LAPTM4AQ15012 233 aa12.16□□□□□ -0.46
CDH13-207ENST00000565636 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
CDH13-207ENST00000565636 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
CDH13-207ENST00000565636 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
CDH13-207ENST00000565636 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
CDH13-207ENST00000565636 SEMA3EO15041 775 aa12.14□□□□□ -0.47
CDH13-207ENST00000565636 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
CDH13-207ENST00000565636 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
CDH13-207ENST00000565636 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
CDH13-207ENST00000565636 BTG4Q9NY30 223 aa12.13□□□□□ -0.47
CDH13-207ENST00000565636 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
CDH13-207ENST00000565636 BRD4O60885 1362 aaPredicted RBP12.13□□□□□ -0.47
CDH13-207ENST00000565636 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 COPS2P61201 443 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.12□□□□□ -0.47
CDH13-207ENST00000565636 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
CDH13-207ENST00000565636 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
CDH13-207ENST00000565636 ATP7BP35670 1465 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 OATP04181 439 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 KMT5BQ4FZB7 885 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
CDH13-207ENST00000565636 DCAF11Q8TEB1 546 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 TRAK1Q9UPV9 953 aa12.11□□□□□ -0.47
CDH13-207ENST00000565636 PLEKHG3A1L390 1219 aa12.1□□□□□ -0.47
CDH13-207ENST00000565636 Q6ZNB5 142 aa12.1□□□□□ -0.47
CDH13-207ENST00000565636 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
CDH13-207ENST00000565636 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
CDH13-207ENST00000565636 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
CDH13-207ENST00000565636 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
CDH13-207ENST00000565636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.09□□□□□ -0.47
CDH13-207ENST00000565636 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
CDH13-207ENST00000565636 BARGINQ6ZT62 677 aa12.09□□□□□ -0.47
CDH13-207ENST00000565636 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
CDH13-207ENST00000565636 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
CDH13-207ENST00000565636 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
CDH13-207ENST00000565636 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
CDH13-207ENST00000565636 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
CDH13-207ENST00000565636 ZPR1O75312 459 aa12.08□□□□□ -0.48
CDH13-207ENST00000565636 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDH13-207ENST00000565636 HIC1Q14526 733 aa12.08□□□□□ -0.48
CDH13-207ENST00000565636 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
CDH13-207ENST00000565636 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
CDH13-207ENST00000565636 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
CDH13-207ENST00000565636 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
CDH13-207ENST00000565636 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
CDH13-207ENST00000565636 CPDO75976 1380 aa12.06□□□□□ -0.48
CDH13-207ENST00000565636 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
CDH13-207ENST00000565636 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
CDH13-207ENST00000565636 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
CDH13-207ENST00000565636 CDK19Q9BWU1 502 aa12.05□□□□□ -0.48
CDH13-207ENST00000565636 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
CDH13-207ENST00000565636 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
CDH13-207ENST00000565636 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
CDH13-207ENST00000565636 TOPAZ1Q8N9V7 1692 aa12.04□□□□□ -0.48
CDH13-207ENST00000565636 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
CDH13-207ENST00000565636 GFRA3O60609 400 aa12.03□□□□□ -0.48
CDH13-207ENST00000565636 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CDH13-207ENST00000565636 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
CDH13-207ENST00000565636 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
CDH13-207ENST00000565636 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms