RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 ZNF526Q8TF50 670 aaPredicted RBP29.54■■■□□ 2.32
RPUSD1-206ENST00000565503 HSPA6P17066 643 aa29.53■■■□□ 2.32
RPUSD1-206ENST00000565503 ATG3Q9NT62 314 aa29.53■■■□□ 2.32
RPUSD1-206ENST00000565503 KIAA1551Q9HCM1 1747 aa29.53■■■□□ 2.32
RPUSD1-206ENST00000565503 WWC3Q9ULE0 1092 aa29.52■■■□□ 2.32
RPUSD1-206ENST00000565503 KDRP35968 1356 aa29.52■■■□□ 2.32
RPUSD1-206ENST00000565503 COL5A3P25940 1745 aaPredicted RBP29.51■■■□□ 2.31
RPUSD1-206ENST00000565503 N4BP2Q86UW6 1770 aaPredicted RBP29.5■■■□□ 2.31
RPUSD1-206ENST00000565503 MMP10P09238 476 aa29.5■■■□□ 2.31
RPUSD1-206ENST00000565503 EIF4A2Q14240 407 aaKnown RBP29.49■■■□□ 2.31
RPUSD1-206ENST00000565503 PXDNLA1KZ92 1463 aa29.48■■■□□ 2.31
RPUSD1-206ENST00000565503 ERVV-2B6SEH9 535 aa29.47■■■□□ 2.31
RPUSD1-206ENST00000565503 RTCBQ9Y3I0 505 aaKnown RBP29.47■■■□□ 2.31
RPUSD1-206ENST00000565503 TGFB2P61812 414 aa29.46■■■□□ 2.31
RPUSD1-206ENST00000565503 TRAPPC3LQ5T215 181 aa29.46■■■□□ 2.31
RPUSD1-206ENST00000565503 NLGN1Q8N2Q7 840 aa29.46■■■□□ 2.31
RPUSD1-206ENST00000565503 TIMELESSQ9UNS1 1208 aa29.46■■■□□ 2.31
RPUSD1-206ENST00000565503 HSP90AB1P08238 724 aaKnown RBP29.45■■■□□ 2.31
RPUSD1-206ENST00000565503 ADRA2BP18089 450 aa29.45■■■□□ 2.31
RPUSD1-206ENST00000565503 RC3H1Q5TC82 1133 aaKnown RBP29.45■■■□□ 2.31
RPUSD1-206ENST00000565503 C10orf71Q711Q0 1435 aa29.45■■■□□ 2.3
RPUSD1-206ENST00000565503 BRCA1P38398 1863 aaKnown RBP29.44■■■□□ 2.3
RPUSD1-206ENST00000565503 KIF3CO14782 793 aa29.44■■■□□ 2.3
RPUSD1-206ENST00000565503 DCAF5Q96JK2 942 aa29.44■■■□□ 2.3
RPUSD1-206ENST00000565503 C4AP0C0L4 1744 aa29.44■■■□□ 2.3
RPUSD1-206ENST00000565503 MYH14Q7Z406 1995 aaKnown RBP29.43■■■□□ 2.3
RPUSD1-206ENST00000565503 CNTNAP4Q9C0A0 1308 aa29.43■■■□□ 2.3
RPUSD1-206ENST00000565503 SLC4A9Q96Q91 983 aa29.42■■■□□ 2.3
RPUSD1-206ENST00000565503 RBM42Q9BTD8 480 aaKnown RBP29.41■■■□□ 2.3
RPUSD1-206ENST00000565503 TNNT2P45379 298 aaPredicted RBP29.4■■■□□ 2.3
RPUSD1-206ENST00000565503 ARHGEF1Q92888 912 aaKnown RBP29.4■■■□□ 2.3
RPUSD1-206ENST00000565503 CCDC87Q9NVE4 849 aa29.39■■■□□ 2.3
RPUSD1-206ENST00000565503 ARFGEF1Q9Y6D6 1849 aa29.38■■■□□ 2.29
RPUSD1-206ENST00000565503 RPS6KA4O75676 772 aa29.38■■■□□ 2.29
RPUSD1-206ENST00000565503 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
RPUSD1-206ENST00000565503 PLEKHO1Q53GL0 409 aaPredicted RBP29.38■■■□□ 2.29
RPUSD1-206ENST00000565503 BCS1LQ9Y276 419 aa29.38■■■□□ 2.29
RPUSD1-206ENST00000565503 A0A0G2JLW4 131 aa29.37■■■□□ 2.29
RPUSD1-206ENST00000565503 GYS1P13807 737 aa29.37■■■□□ 2.29
RPUSD1-206ENST00000565503 RFC4P35249 363 aa29.37■■■□□ 2.29
RPUSD1-206ENST00000565503 AMOTQ4VCS5 1084 aa29.37■■■□□ 2.29
RPUSD1-206ENST00000565503 KDM6AO15550 1401 aaPredicted RBP29.37■■■□□ 2.29
RPUSD1-206ENST00000565503 PARP3Q9Y6F1 533 aa29.35■■■□□ 2.29
RPUSD1-206ENST00000565503 CABP4P57796 275 aa29.34■■■□□ 2.29
RPUSD1-206ENST00000565503 ZNF530Q6P9A1 599 aaPredicted RBP29.34■■■□□ 2.29
RPUSD1-206ENST00000565503 POLR3GLQ9BT43 218 aa29.34■■■□□ 2.29
RPUSD1-206ENST00000565503 DPEP1P16444 411 aa29.33■■■□□ 2.29
RPUSD1-206ENST00000565503 ARHGAP27Q6ZUM4 889 aa29.32■■■□□ 2.28
RPUSD1-206ENST00000565503 TOMM70O94826 608 aa29.31■■■□□ 2.28
RPUSD1-206ENST00000565503 APLP1P51693 650 aa29.31■■■□□ 2.28
RPUSD1-206ENST00000565503 FCHSD2O94868 740 aa29.3■■■□□ 2.28
RPUSD1-206ENST00000565503 SCN11AQ9UI33 1791 aa29.29■■■□□ 2.28
RPUSD1-206ENST00000565503 TJP1Q07157 1748 aa29.29■■■□□ 2.28
RPUSD1-206ENST00000565503 MTHFSP49914 203 aa29.29■■■□□ 2.28
RPUSD1-206ENST00000565503 C1orf141Q5JVX7 400 aa29.28■■■□□ 2.28
RPUSD1-206ENST00000565503 CLSPNQ9HAW4 1339 aa29.27■■■□□ 2.28
RPUSD1-206ENST00000565503 PANK3Q9H999 370 aa29.27■■■□□ 2.28
RPUSD1-206ENST00000565503 PTCD1O75127 700 aaKnown RBP29.26■■■□□ 2.27
RPUSD1-206ENST00000565503 KCNA3P22001 575 aa29.26■■■□□ 2.27
RPUSD1-206ENST00000565503 CRKLP46109 303 aaKnown RBP29.26■■■□□ 2.27
RPUSD1-206ENST00000565503 AEBP1Q8IUX7 1158 aa29.24■■■□□ 2.27
RPUSD1-206ENST00000565503 NFATC2IPQ8NCF5 419 aa29.24■■■□□ 2.27
RPUSD1-206ENST00000565503 PIM2Q9P1W9 311 aa29.24■■■□□ 2.27
RPUSD1-206ENST00000565503 USP42Q9H9J4 1324 aaKnown RBP29.23■■■□□ 2.27
RPUSD1-206ENST00000565503 NMRK2Q9NPI5 230 aa29.23■■■□□ 2.27
RPUSD1-206ENST00000565503 ADAMTS7Q9UKP4 1686 aa29.22■■■□□ 2.27
RPUSD1-206ENST00000565503 SBF1O95248 1867 aa29.22■■■□□ 2.27
RPUSD1-206ENST00000565503 EIF4G2P78344 907 aaKnown RBP eCLIP29.21■■■□□ 2.27
RPUSD1-206ENST00000565503 C9orf131Q5VYM1 1079 aa29.21■■■□□ 2.27
RPUSD1-206ENST00000565503 MORC1Q86VD1 984 aa29.21■■■□□ 2.27
RPUSD1-206ENST00000565503 SRP68Q9UHB9 627 aaKnown RBP29.21■■■□□ 2.27
RPUSD1-206ENST00000565503 VIRMAQ69YN4 1812 aaKnown RBP29.21■■■□□ 2.27
RPUSD1-206ENST00000565503 WDR90Q96KV7 1748 aa29.2■■■□□ 2.27
RPUSD1-206ENST00000565503 FKBP8Q14318 412 aa29.2■■■□□ 2.26
RPUSD1-206ENST00000565503 DALRD3Q5D0E6 543 aaKnown RBP29.2■■■□□ 2.26
RPUSD1-206ENST00000565503 SULT6B1Q6IMI4 303 aa29.19■■■□□ 2.26
RPUSD1-206ENST00000565503 DNAJC5GQ8N7S2 189 aa29.19■■■□□ 2.26
RPUSD1-206ENST00000565503 RBM46Q8TBY0 533 aaKnown RBP29.19■■■□□ 2.26
RPUSD1-206ENST00000565503 DDR1Q08345 913 aa29.18■■■□□ 2.26
RPUSD1-206ENST00000565503 HSPA5P11021 654 aaKnown RBP29.17■■■□□ 2.26
RPUSD1-206ENST00000565503 INTS5Q6P9B9 1019 aaKnown RBP29.16■■■□□ 2.26
RPUSD1-206ENST00000565503 TNRC6CQ9HCJ0 1690 aaKnown RBP29.15■■■□□ 2.26
RPUSD1-206ENST00000565503 C16orf71Q8IYS4 520 aaPredicted RBP29.15■■■□□ 2.26
RPUSD1-206ENST00000565503 KDM2BQ8NHM5 1336 aa29.15■■■□□ 2.26
RPUSD1-206ENST00000565503 POLRMTO00411 1230 aaKnown RBP29.14■■■□□ 2.26
RPUSD1-206ENST00000565503 TM4SF1P30408 202 aa29.14■■■□□ 2.26
RPUSD1-206ENST00000565503 IL13P35225 146 aa29.14■■■□□ 2.26
RPUSD1-206ENST00000565503 AKAP4Q5JQC9 854 aa29.14■■■□□ 2.26
RPUSD1-206ENST00000565503 AFDNP55196 1824 aaKnown RBP29.14■■■□□ 2.26
RPUSD1-206ENST00000565503 MRC1P22897 1456 aa29.12■■■□□ 2.25
RPUSD1-206ENST00000565503 KCPQ6ZWJ8 1503 aa29.12■■■□□ 2.25
RPUSD1-206ENST00000565503 ZPR1O75312 459 aa29.12■■■□□ 2.25
RPUSD1-206ENST00000565503 FSTL1Q12841 308 aa29.12■■■□□ 2.25
RPUSD1-206ENST00000565503 RNF181Q9P0P0 153 aa29.12■■■□□ 2.25
RPUSD1-206ENST00000565503 SLC52A2Q9HAB3 445 aa29.11■■■□□ 2.25
RPUSD1-206ENST00000565503 KNSTRNQ9Y448 316 aa29.11■■■□□ 2.25
RPUSD1-206ENST00000565503 NRXN2Q9P2S2 1712 aa29.11■■■□□ 2.25
RPUSD1-206ENST00000565503 DLEC1Q9Y238 1755 aa29.11■■■□□ 2.25
RPUSD1-206ENST00000565503 CHRNA5P30532 468 aa29.1■■■□□ 2.25
RPUSD1-206ENST00000565503 SOS1Q07889 1333 aaPredicted RBP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms