RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
SPG7-211ENST00000565370 MSH5O43196 834 aa16.46■□□□□ 0.23
SPG7-211ENST00000565370 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
SPG7-211ENST00000565370 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.23
SPG7-211ENST00000565370 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
SPG7-211ENST00000565370 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
SPG7-211ENST00000565370 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.22
SPG7-211ENST00000565370 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
SPG7-211ENST00000565370 POLD1P28340 1107 aa16.45■□□□□ 0.22
SPG7-211ENST00000565370 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
SPG7-211ENST00000565370 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
SPG7-211ENST00000565370 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
SPG7-211ENST00000565370 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
SPG7-211ENST00000565370 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
SPG7-211ENST00000565370 PTGER2P43116 358 aa16.44■□□□□ 0.22
SPG7-211ENST00000565370 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
SPG7-211ENST00000565370 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
SPG7-211ENST00000565370 U2AF1L5P0DN76 240 aaPredicted RBP16.42■□□□□ 0.22
SPG7-211ENST00000565370 U2AF1Q01081 240 aaKnown RBP eCLIP16.42■□□□□ 0.22
SPG7-211ENST00000565370 NEFMP07197 916 aa16.41■□□□□ 0.22
SPG7-211ENST00000565370 SSFA2P28290 1259 aa16.41■□□□□ 0.22
SPG7-211ENST00000565370 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
SPG7-211ENST00000565370 ZNF784Q8NCA9 323 aaPredicted RBP16.41■□□□□ 0.22
SPG7-211ENST00000565370 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
SPG7-211ENST00000565370 ARXQ96QS3 562 aa16.41■□□□□ 0.22
SPG7-211ENST00000565370 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
SPG7-211ENST00000565370 TJP1Q07157 1748 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 GNPATO15228 680 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
SPG7-211ENST00000565370 PHF14O94880 888 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
SPG7-211ENST00000565370 RALBP1Q15311 655 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 NFATC2IPQ8NCF5 419 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
SPG7-211ENST00000565370 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
SPG7-211ENST00000565370 ITPK1Q13572 414 aa16.39■□□□□ 0.21
SPG7-211ENST00000565370 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
SPG7-211ENST00000565370 CNTNAP4Q9C0A0 1308 aa16.39■□□□□ 0.21
SPG7-211ENST00000565370 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
SPG7-211ENST00000565370 TEFQ10587 303 aa16.38■□□□□ 0.21
SPG7-211ENST00000565370 CHD4Q14839 1912 aa16.38■□□□□ 0.21
SPG7-211ENST00000565370 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
SPG7-211ENST00000565370 SIPA1L3O60292 1781 aaPredicted RBP16.37■□□□□ 0.21
SPG7-211ENST00000565370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.37■□□□□ 0.21
SPG7-211ENST00000565370 FCHSD2O94868 740 aa16.37■□□□□ 0.21
SPG7-211ENST00000565370 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
SPG7-211ENST00000565370 UTRNP46939 3433 aa16.37■□□□□ 0.21
SPG7-211ENST00000565370 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
SPG7-211ENST00000565370 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
SPG7-211ENST00000565370 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
SPG7-211ENST00000565370 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
SPG7-211ENST00000565370 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
SPG7-211ENST00000565370 ADRA2BP18089 450 aa16.35■□□□□ 0.21
SPG7-211ENST00000565370 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
SPG7-211ENST00000565370 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
SPG7-211ENST00000565370 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
SPG7-211ENST00000565370 SYT17Q9BSW7 474 aa16.35■□□□□ 0.21
SPG7-211ENST00000565370 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
SPG7-211ENST00000565370 C4AP0C0L4 1744 aa16.35■□□□□ 0.21
SPG7-211ENST00000565370 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
SPG7-211ENST00000565370 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
SPG7-211ENST00000565370 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
SPG7-211ENST00000565370 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
SPG7-211ENST00000565370 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
SPG7-211ENST00000565370 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
SPG7-211ENST00000565370 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
SPG7-211ENST00000565370 SLC39A6Q13433 755 aa16.31■□□□□ 0.2
SPG7-211ENST00000565370 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
SPG7-211ENST00000565370 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
SPG7-211ENST00000565370 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
SPG7-211ENST00000565370 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
SPG7-211ENST00000565370 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
SPG7-211ENST00000565370 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
SPG7-211ENST00000565370 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
SPG7-211ENST00000565370 RFC4P35249 363 aa16.29■□□□□ 0.2
SPG7-211ENST00000565370 C1QTNF8P60827 252 aa16.29■□□□□ 0.2
SPG7-211ENST00000565370 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
SPG7-211ENST00000565370 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
SPG7-211ENST00000565370 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
SPG7-211ENST00000565370 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
SPG7-211ENST00000565370 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
SPG7-211ENST00000565370 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
SPG7-211ENST00000565370 FMNL2Q96PY5 1086 aa16.27■□□□□ 0.2
SPG7-211ENST00000565370 HEG1Q9ULI3 1381 aa16.26■□□□□ 0.19
SPG7-211ENST00000565370 STARD3NLO95772 234 aa16.26■□□□□ 0.19
SPG7-211ENST00000565370 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
SPG7-211ENST00000565370 MCM10Q7L590 875 aa16.26■□□□□ 0.19
SPG7-211ENST00000565370 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
SPG7-211ENST00000565370 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
SPG7-211ENST00000565370 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
SPG7-211ENST00000565370 COL15A1P39059 1388 aa16.26■□□□□ 0.19
SPG7-211ENST00000565370 CYP19A1P11511 503 aaPredicted RBP16.25■□□□□ 0.19
SPG7-211ENST00000565370 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
SPG7-211ENST00000565370 PRKRIP1Q9H875 184 aaPredicted RBP16.25■□□□□ 0.19
SPG7-211ENST00000565370 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
SPG7-211ENST00000565370 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
SPG7-211ENST00000565370 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
SPG7-211ENST00000565370 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
SPG7-211ENST00000565370 PLEKHF1Q96S99 279 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms