RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 PHF24Q9UPV7 400 aa10.76□□□□□ -0.69
CHD9-214ENST00000565119 C2CD2LO14523 706 aa10.75□□□□□ -0.69
CHD9-214ENST00000565119 OSBPL3Q9H4L5 887 aa10.75□□□□□ -0.69
CHD9-214ENST00000565119 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
CHD9-214ENST00000565119 CHRNA4P43681 627 aa10.74□□□□□ -0.69
CHD9-214ENST00000565119 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
CHD9-214ENST00000565119 TRAK2O60296 914 aa10.73□□□□□ -0.69
CHD9-214ENST00000565119 AMPD1P23109 780 aa10.73□□□□□ -0.69
CHD9-214ENST00000565119 GNB5O14775 395 aa10.72□□□□□ -0.69
CHD9-214ENST00000565119 FBXO45P0C2W1 286 aa10.72□□□□□ -0.69
CHD9-214ENST00000565119 PHKA2P46019 1235 aa10.72□□□□□ -0.69
CHD9-214ENST00000565119 SLCO4C1Q6ZQN7 724 aa10.72□□□□□ -0.69
CHD9-214ENST00000565119 RAB6BQ9NRW1 208 aa10.72□□□□□ -0.69
CHD9-214ENST00000565119 GGA1Q9UJY5 639 aa10.72□□□□□ -0.69
CHD9-214ENST00000565119 BMP4P12644 408 aa10.71□□□□□ -0.69
CHD9-214ENST00000565119 KRTAP1-3Q8IUG1 177 aa10.71□□□□□ -0.69
CHD9-214ENST00000565119 BTBD6Q96KE9 485 aa10.71□□□□□ -0.69
CHD9-214ENST00000565119 A0A1B0GTH6 734 aa10.7□□□□□ -0.7
CHD9-214ENST00000565119 RNF20Q5VTR2 975 aa10.7□□□□□ -0.7
CHD9-214ENST00000565119 SEMA6BQ9H3T3 888 aa10.7□□□□□ -0.7
CHD9-214ENST00000565119 IL2RAP01589 272 aa10.69□□□□□ -0.7
CHD9-214ENST00000565119 CTBSQ01459 385 aa10.69□□□□□ -0.7
CHD9-214ENST00000565119 CENPCQ03188 943 aa10.69□□□□□ -0.7
CHD9-214ENST00000565119 RUBCNLQ9H714 662 aa10.69□□□□□ -0.7
CHD9-214ENST00000565119 ATXN7L1Q9ULK2 861 aaPredicted RBP10.69□□□□□ -0.7
CHD9-214ENST00000565119 PCDHB11Q9Y5F2 797 aa10.69□□□□□ -0.7
CHD9-214ENST00000565119 RFC5P40937 340 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 DGKGP49619 791 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 DOC2BQ14184 412 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 LBRQ14739 615 aaKnown RBP10.68□□□□□ -0.7
CHD9-214ENST00000565119 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 ABHD17AQ96GS6 310 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 ESYT1Q9BSJ8 1104 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 FAM117AQ9C073 453 aa10.68□□□□□ -0.7
CHD9-214ENST00000565119 EPXP11678 715 aa10.67□□□□□ -0.7
CHD9-214ENST00000565119 NDFIP2Q9NV92 336 aa10.67□□□□□ -0.7
CHD9-214ENST00000565119 HRH3Q9Y5N1 445 aa10.67□□□□□ -0.7
CHD9-214ENST00000565119 PIK3R2O00459 728 aa10.66□□□□□ -0.7
CHD9-214ENST00000565119 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
CHD9-214ENST00000565119 BNIP3LO60238 219 aa10.65□□□□□ -0.7
CHD9-214ENST00000565119 GNRH1P01148 92 aa10.65□□□□□ -0.7
CHD9-214ENST00000565119 FGFR3P22607 806 aa10.65□□□□□ -0.7
CHD9-214ENST00000565119 MSX1P28360 303 aa10.65□□□□□ -0.7
CHD9-214ENST00000565119 ZSCAN10Q96SZ4 725 aaPredicted RBP10.65□□□□□ -0.7
CHD9-214ENST00000565119 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
CHD9-214ENST00000565119 C4orf17Q53FE4 359 aa10.64□□□□□ -0.71
CHD9-214ENST00000565119 PGBD3Q8N328 593 aa10.64□□□□□ -0.71
CHD9-214ENST00000565119 FHDC1Q9C0D6 1143 aaPredicted RBP10.64□□□□□ -0.71
CHD9-214ENST00000565119 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
CHD9-214ENST00000565119 NOP53Q9NZM5 478 aaKnown RBP10.64□□□□□ -0.71
CHD9-214ENST00000565119 RNF135Q8IUD6 432 aa10.63□□□□□ -0.71
CHD9-214ENST00000565119 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
CHD9-214ENST00000565119 KDM4CQ9H3R0 1056 aa10.63□□□□□ -0.71
CHD9-214ENST00000565119 EFHC2Q5JST6 749 aa10.62□□□□□ -0.71
CHD9-214ENST00000565119 ESF1Q9H501 851 aaKnown RBP10.62□□□□□ -0.71
CHD9-214ENST00000565119 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
CHD9-214ENST00000565119 ARAFP10398 606 aa10.61□□□□□ -0.71
CHD9-214ENST00000565119 GNASQ5JWF2 1037 aa10.61□□□□□ -0.71
CHD9-214ENST00000565119 XAGE2Q96GT9 111 aa10.61□□□□□ -0.71
CHD9-214ENST00000565119 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
CHD9-214ENST00000565119 FOXD4L6Q3SYB3 417 aaPredicted RBP10.59□□□□□ -0.71
CHD9-214ENST00000565119 TMEM214Q6NUQ4 689 aaKnown RBP10.59□□□□□ -0.71
CHD9-214ENST00000565119 FOXD4L3Q6VB84 417 aaPredicted RBP10.59□□□□□ -0.71
CHD9-214ENST00000565119 MCCD1P59942 119 aaPredicted RBP10.58□□□□□ -0.72
CHD9-214ENST00000565119 CHSY3Q70JA7 882 aa10.58□□□□□ -0.72
CHD9-214ENST00000565119 KRTAP4-12Q9BQ66 201 aa10.58□□□□□ -0.72
CHD9-214ENST00000565119 NR1H3Q13133 447 aa10.57□□□□□ -0.72
CHD9-214ENST00000565119 CRISPLD1Q9H336 500 aa10.57□□□□□ -0.72
CHD9-214ENST00000565119 KLF15Q9UIH9 416 aa10.57□□□□□ -0.72
CHD9-214ENST00000565119 GATA4P43694 442 aa10.56□□□□□ -0.72
CHD9-214ENST00000565119 LCE3BQ5TA77 95 aa10.56□□□□□ -0.72
CHD9-214ENST00000565119 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
CHD9-214ENST00000565119 DNAAF2Q9NVR5 837 aaKnown RBP10.56□□□□□ -0.72
CHD9-214ENST00000565119 HCN2Q9UL51 889 aa10.56□□□□□ -0.72
CHD9-214ENST00000565119 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
CHD9-214ENST00000565119 RSPO4Q2I0M5 234 aaPredicted RBP10.55□□□□□ -0.72
CHD9-214ENST00000565119 TRIM11Q96F44 468 aa10.55□□□□□ -0.72
CHD9-214ENST00000565119 TMEM259Q4ZIN3 620 aa10.54□□□□□ -0.72
CHD9-214ENST00000565119 ZCCHC2Q9C0B9 1178 aaKnown RBP10.54□□□□□ -0.72
CHD9-214ENST00000565119 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
CHD9-214ENST00000565119 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
CHD9-214ENST00000565119 PCDHGC4Q9Y5F7 938 aa10.53□□□□□ -0.72
CHD9-214ENST00000565119 SCO2A0A1W2PP80 73 aa10.52□□□□□ -0.73
CHD9-214ENST00000565119 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
CHD9-214ENST00000565119 NKAPLQ5M9Q1 402 aa10.52□□□□□ -0.73
CHD9-214ENST00000565119 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
CHD9-214ENST00000565119 RHBDD1Q8TEB9 315 aa10.52□□□□□ -0.73
CHD9-214ENST00000565119 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
CHD9-214ENST00000565119 STAU1O95793 577 aaKnown RBP10.51□□□□□ -0.73
CHD9-214ENST00000565119 ADH6P28332 368 aa10.51□□□□□ -0.73
CHD9-214ENST00000565119 FIGNL1Q6PIW4 674 aa10.51□□□□□ -0.73
CHD9-214ENST00000565119 GPR37L1O60883 481 aa10.5□□□□□ -0.73
CHD9-214ENST00000565119 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
CHD9-214ENST00000565119 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
CHD9-214ENST00000565119 ESCO1Q5FWF5 840 aa10.49□□□□□ -0.73
CHD9-214ENST00000565119 CD33P20138 364 aa10.48□□□□□ -0.73
CHD9-214ENST00000565119 ATP4AP20648 1035 aa10.48□□□□□ -0.73
CHD9-214ENST00000565119 PLA2G4AP47712 749 aa10.48□□□□□ -0.73
CHD9-214ENST00000565119 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
CHD9-214ENST00000565119 ETNK1Q9HBU6 452 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms