RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 LINC00116Q8NCU8 138 aa20.48■□□□□ 0.87
CX3CL1-203ENST00000564948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.47■□□□□ 0.87
CX3CL1-203ENST00000564948 PER1O15534 1290 aaPredicted RBP20.47■□□□□ 0.87
CX3CL1-203ENST00000564948 MTHFSP49914 203 aa20.47■□□□□ 0.87
CX3CL1-203ENST00000564948 CABP4P57796 275 aa20.47■□□□□ 0.87
CX3CL1-203ENST00000564948 KDM6AO15550 1401 aaPredicted RBP20.46■□□□□ 0.87
CX3CL1-203ENST00000564948 ITPK1Q13572 414 aa20.46■□□□□ 0.87
CX3CL1-203ENST00000564948 CC2D1BQ5T0F9 858 aaKnown RBP20.46■□□□□ 0.87
CX3CL1-203ENST00000564948 GNPATO15228 680 aa20.45■□□□□ 0.86
CX3CL1-203ENST00000564948 AMIGO3Q86WK7 504 aa20.44■□□□□ 0.86
CX3CL1-203ENST00000564948 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
CX3CL1-203ENST00000564948 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
CX3CL1-203ENST00000564948 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
CX3CL1-203ENST00000564948 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
CX3CL1-203ENST00000564948 UBR3Q6ZT12 1888 aa20.42■□□□□ 0.86
CX3CL1-203ENST00000564948 DIAPH1O60610 1272 aaKnown RBP20.41■□□□□ 0.86
CX3CL1-203ENST00000564948 CD2APQ9Y5K6 639 aa20.41■□□□□ 0.86
CX3CL1-203ENST00000564948 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
CX3CL1-203ENST00000564948 SMIM5Q71RC9 77 aa20.4■□□□□ 0.86
CX3CL1-203ENST00000564948 RTCBQ9Y3I0 505 aaKnown RBP20.4■□□□□ 0.86
CX3CL1-203ENST00000564948 HMOX1P09601 288 aa20.39■□□□□ 0.85
CX3CL1-203ENST00000564948 ZNF831Q5JPB2 1677 aa20.38■□□□□ 0.85
CX3CL1-203ENST00000564948 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
CX3CL1-203ENST00000564948 RC3H1Q5TC82 1133 aaKnown RBP20.38■□□□□ 0.85
CX3CL1-203ENST00000564948 NFATC2IPQ8NCF5 419 aa20.38■□□□□ 0.85
CX3CL1-203ENST00000564948 SLC4A9Q96Q91 983 aa20.38■□□□□ 0.85
CX3CL1-203ENST00000564948 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
CX3CL1-203ENST00000564948 TRAPPC3LQ5T215 181 aa20.37■□□□□ 0.85
CX3CL1-203ENST00000564948 ADRA2BP18089 450 aa20.36■□□□□ 0.85
CX3CL1-203ENST00000564948 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
CX3CL1-203ENST00000564948 ZNF784Q8NCA9 323 aaPredicted RBP20.36■□□□□ 0.85
CX3CL1-203ENST00000564948 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
CX3CL1-203ENST00000564948 UTRNP46939 3433 aa20.34■□□□□ 0.85
CX3CL1-203ENST00000564948 CHD4Q14839 1912 aa20.34■□□□□ 0.85
CX3CL1-203ENST00000564948 SLC52A2Q9HAB3 445 aa20.34■□□□□ 0.85
CX3CL1-203ENST00000564948 RPS6KA4O75676 772 aa20.33■□□□□ 0.85
CX3CL1-203ENST00000564948 YBX3P16989 372 aaKnown RBP eCLIP20.33■□□□□ 0.85
CX3CL1-203ENST00000564948 COL5A3P25940 1745 aaPredicted RBP20.33■□□□□ 0.84
CX3CL1-203ENST00000564948 COL3A1P02461 1466 aaPredicted RBP20.32■□□□□ 0.84
CX3CL1-203ENST00000564948 SCN11AQ9UI33 1791 aa20.32■□□□□ 0.84
CX3CL1-203ENST00000564948 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
CX3CL1-203ENST00000564948 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
CX3CL1-203ENST00000564948 MRC1P22897 1456 aa20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 U2SURPO15042 1029 aaKnown RBP20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 MMP10P09238 476 aa20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 RFC4P35249 363 aa20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 NLGN1Q8N2Q7 840 aa20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 ARHGEF1Q92888 912 aaKnown RBP20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 LGR6Q9HBX8 967 aa20.31■□□□□ 0.84
CX3CL1-203ENST00000564948 CRKLP46109 303 aaKnown RBP20.3■□□□□ 0.84
CX3CL1-203ENST00000564948 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
CX3CL1-203ENST00000564948 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
CX3CL1-203ENST00000564948 GYS1P13807 737 aa20.27■□□□□ 0.84
CX3CL1-203ENST00000564948 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
CX3CL1-203ENST00000564948 TJP1Q07157 1748 aa20.26■□□□□ 0.83
CX3CL1-203ENST00000564948 SLC39A6Q13433 755 aa20.25■□□□□ 0.83
CX3CL1-203ENST00000564948 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
CX3CL1-203ENST00000564948 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
CX3CL1-203ENST00000564948 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
CX3CL1-203ENST00000564948 ADAMTS7Q9UKP4 1686 aa20.25■□□□□ 0.83
CX3CL1-203ENST00000564948 PARP3Q9Y6F1 533 aa20.24■□□□□ 0.83
CX3CL1-203ENST00000564948 GNAT3A8MTJ3 354 aa20.23■□□□□ 0.83
CX3CL1-203ENST00000564948 INTS5Q6P9B9 1019 aaKnown RBP20.23■□□□□ 0.83
CX3CL1-203ENST00000564948 TTC5Q8N0Z6 440 aa20.23■□□□□ 0.83
CX3CL1-203ENST00000564948 GOLGB1Q14789 3259 aaKnown RBP20.23■□□□□ 0.83
CX3CL1-203ENST00000564948 USP42Q9H9J4 1324 aaKnown RBP20.23■□□□□ 0.83
CX3CL1-203ENST00000564948 KCPQ6ZWJ8 1503 aa20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 C10orf71Q711Q0 1435 aa20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 TGFB2P61812 414 aa20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 WWC3Q9ULE0 1092 aa20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 MYH14Q7Z406 1995 aaKnown RBP20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
CX3CL1-203ENST00000564948 TEFQ10587 303 aa20.21■□□□□ 0.83
CX3CL1-203ENST00000564948 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
CX3CL1-203ENST00000564948 PXDNLA1KZ92 1463 aa20.2■□□□□ 0.82
CX3CL1-203ENST00000564948 CYP19A1P11511 503 aaPredicted RBP20.2■□□□□ 0.82
CX3CL1-203ENST00000564948 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
CX3CL1-203ENST00000564948 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
CX3CL1-203ENST00000564948 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
CX3CL1-203ENST00000564948 ZPR1O75312 459 aa20.19■□□□□ 0.82
CX3CL1-203ENST00000564948 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
CX3CL1-203ENST00000564948 GIGYF1O75420 1035 aaPredicted RBP20.18■□□□□ 0.82
CX3CL1-203ENST00000564948 FKBP8Q14318 412 aa20.18■□□□□ 0.82
CX3CL1-203ENST00000564948 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 ZBTB1Q9Y2K1 713 aa20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 VIRMAQ69YN4 1812 aaKnown RBP20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 KIF13BQ9NQT8 1826 aa20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 COL15A1P39059 1388 aa20.17■□□□□ 0.82
CX3CL1-203ENST00000564948 STARD3NLO95772 234 aa20.16■□□□□ 0.82
CX3CL1-203ENST00000564948 A0A0G2JLW4 131 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 USPL1Q5W0Q7 1092 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 BCS1LQ9Y276 419 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
CX3CL1-203ENST00000564948 UBR2Q8IWV8 1755 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms