RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 MRPL50Q8N5N7 158 aaKnown RBP14.44□□□□□ -0.1
SNX29-204ENST00000564791 NGLY1Q96IV0 654 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 PPP4R2Q9NY27 417 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 TNNQ9UQP3 1299 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 SPATA31A5Q5VU36 1347 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 SPATA31A7Q8IWB4 1347 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 BCL9LQ86UU0 1499 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 TCERG1O14776 1098 aaKnown RBP14.44□□□□□ -0.1
SNX29-204ENST00000564791 SLC52A2Q9HAB3 445 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 KIF16BQ96L93 1317 aa14.44□□□□□ -0.1
SNX29-204ENST00000564791 KCNQ3O43525 872 aa14.43□□□□□ -0.1
SNX29-204ENST00000564791 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
SNX29-204ENST00000564791 PDE3AQ14432 1141 aa14.43□□□□□ -0.1
SNX29-204ENST00000564791 ZKSCAN2Q63HK3 967 aa14.43□□□□□ -0.1
SNX29-204ENST00000564791 UNC5CLQ8IV45 518 aa14.43□□□□□ -0.1
SNX29-204ENST00000564791 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
SNX29-204ENST00000564791 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
SNX29-204ENST00000564791 TNS2Q63HR2 1409 aa14.43□□□□□ -0.1
SNX29-204ENST00000564791 EIF4A1P60842 406 aaKnown RBP14.42□□□□□ -0.1
SNX29-204ENST00000564791 NKX1-1Q15270 411 aaPredicted RBP14.42□□□□□ -0.1
SNX29-204ENST00000564791 PANK1Q8TE04 598 aa14.42□□□□□ -0.1
SNX29-204ENST00000564791 THRAP3Q9Y2W1 955 aaKnown RBP14.42□□□□□ -0.1
SNX29-204ENST00000564791 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
SNX29-204ENST00000564791 CCDC9Q9Y3X0 531 aaKnown RBP14.41□□□□□ -0.1
SNX29-204ENST00000564791 CACNA1FO60840 1977 aa14.41□□□□□ -0.1
SNX29-204ENST00000564791 RLBP1P12271 317 aa14.41□□□□□ -0.1
SNX29-204ENST00000564791 SOS1Q07889 1333 aaPredicted RBP14.41□□□□□ -0.1
SNX29-204ENST00000564791 MEX3CQ5U5Q3 659 aaKnown RBP14.41□□□□□ -0.1
SNX29-204ENST00000564791 NFATC2IPQ8NCF5 419 aa14.41□□□□□ -0.1
SNX29-204ENST00000564791 ITGB4P16144 1822 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 PAPPAQ13219 1627 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 TRIM27P14373 513 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 CABP4P57796 275 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 VPS72Q15906 364 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.1
SNX29-204ENST00000564791 CDCA7Q9BWT1 371 aaPredicted RBP14.4□□□□□ -0.1
SNX29-204ENST00000564791 C5P01031 1676 aa14.39□□□□□ -0.11
SNX29-204ENST00000564791 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
SNX29-204ENST00000564791 SLC39A6Q13433 755 aa14.39□□□□□ -0.11
SNX29-204ENST00000564791 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
SNX29-204ENST00000564791 HEG1Q9ULI3 1381 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 ERVV-2B6SEH9 535 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 EXOC5O00471 708 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 BARGINQ6ZT62 677 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
SNX29-204ENST00000564791 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
SNX29-204ENST00000564791 USP21Q9UK80 565 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 UBR2Q8IWV8 1755 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 DOT1LQ8TEK3 1739 aa14.38□□□□□ -0.11
SNX29-204ENST00000564791 HOXB7P09629 217 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 MS4A1P11836 297 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 ZNF790Q6PG37 636 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 GLI3P10071 1580 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 CCDC30Q5VVM6 783 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 NECTIN2Q92692 538 aa14.37□□□□□ -0.11
SNX29-204ENST00000564791 AFF2P51816 1311 aa14.36□□□□□ -0.11
SNX29-204ENST00000564791 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
SNX29-204ENST00000564791 DDB1Q16531 1140 aa14.36□□□□□ -0.11
SNX29-204ENST00000564791 HDGFL1Q5TGJ6 251 aa14.36□□□□□ -0.11
SNX29-204ENST00000564791 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
SNX29-204ENST00000564791 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
SNX29-204ENST00000564791 GIGYF1O75420 1035 aaPredicted RBP14.35□□□□□ -0.11
SNX29-204ENST00000564791 MVPQ14764 893 aaKnown RBP14.35□□□□□ -0.11
SNX29-204ENST00000564791 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
SNX29-204ENST00000564791 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
SNX29-204ENST00000564791 RGS12O14924 1447 aa14.35□□□□□ -0.11
SNX29-204ENST00000564791 LAMB4A4D0S4 1761 aa14.35□□□□□ -0.11
SNX29-204ENST00000564791 THSD7AQ9UPZ6 1657 aa14.35□□□□□ -0.11
SNX29-204ENST00000564791 EIF2S2P20042 333 aaKnown RBP14.34□□□□□ -0.11
SNX29-204ENST00000564791 TTC5Q8N0Z6 440 aa14.34□□□□□ -0.11
SNX29-204ENST00000564791 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
SNX29-204ENST00000564791 KCPQ6ZWJ8 1503 aa14.34□□□□□ -0.11
SNX29-204ENST00000564791 ABCC4O15439 1325 aa14.34□□□□□ -0.11
SNX29-204ENST00000564791 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.11
SNX29-204ENST00000564791 G2E3Q7L622 706 aa14.33□□□□□ -0.11
SNX29-204ENST00000564791 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.11
SNX29-204ENST00000564791 ZNF496Q96IT1 587 aaPredicted RBP14.33□□□□□ -0.11
SNX29-204ENST00000564791 ATRNO75882 1429 aa14.33□□□□□ -0.12
SNX29-204ENST00000564791 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
SNX29-204ENST00000564791 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
SNX29-204ENST00000564791 PTPRCP08575 1304 aa14.32□□□□□ -0.12
SNX29-204ENST00000564791 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
SNX29-204ENST00000564791 FMNL2Q96PY5 1086 aa14.32□□□□□ -0.12
SNX29-204ENST00000564791 CHMP4AQ9BY43 222 aa14.31□□□□□ -0.12
SNX29-204ENST00000564791 CHPF2Q9P2E5 772 aa14.31□□□□□ -0.12
SNX29-204ENST00000564791 N4BP2Q86UW6 1770 aaPredicted RBP14.31□□□□□ -0.12
SNX29-204ENST00000564791 FLIIQ13045 1269 aa14.3□□□□□ -0.12
SNX29-204ENST00000564791 PIGBQ92521 554 aa14.3□□□□□ -0.12
SNX29-204ENST00000564791 BCL9O00512 1426 aa14.3□□□□□ -0.12
SNX29-204ENST00000564791 SNRPA1P09661 255 aaKnown RBP14.3□□□□□ -0.12
SNX29-204ENST00000564791 DDX19BQ9UMR2 479 aa14.3□□□□□ -0.12
SNX29-204ENST00000564791 ANXA1P04083 346 aa14.29□□□□□ -0.12
SNX29-204ENST00000564791 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
SNX29-204ENST00000564791 TRPC5Q9UL62 973 aaPredicted RBP14.29□□□□□ -0.12
SNX29-204ENST00000564791 A0A0G2JS52 829 aa14.28□□□□□ -0.12
SNX29-204ENST00000564791 MYT1Q01538 1121 aa14.28□□□□□ -0.12
SNX29-204ENST00000564791 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms