RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 ITPK1Q13572 414 aa34.49■■■■□ 3.11
CYLD-208ENST00000564634 GNPATO15228 680 aa34.48■■■■□ 3.11
CYLD-208ENST00000564634 PHKG2P15735 406 aa34.46■■■■□ 3.11
CYLD-208ENST00000564634 ATP6V1AP38606 617 aa34.45■■■■□ 3.11
CYLD-208ENST00000564634 KNSTRNQ9Y448 316 aa34.45■■■■□ 3.11
CYLD-208ENST00000564634 IFNL2Q8IZJ0 200 aa34.44■■■■□ 3.1
CYLD-208ENST00000564634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.44■■■■□ 3.1
CYLD-208ENST00000564634 POLKQ9UBT6 870 aa34.43■■■■□ 3.1
CYLD-208ENST00000564634 TNNT2P45379 298 aaPredicted RBP34.41■■■■□ 3.1
CYLD-208ENST00000564634 ATG3Q9NT62 314 aa34.41■■■■□ 3.1
CYLD-208ENST00000564634 EIF4A2Q14240 407 aaKnown RBP34.39■■■■□ 3.1
CYLD-208ENST00000564634 MMP10P09238 476 aa34.38■■■■□ 3.09
CYLD-208ENST00000564634 KDRP35968 1356 aa34.36■■■■□ 3.09
CYLD-208ENST00000564634 CICQ96RK0 1608 aaPredicted RBP34.36■■■■□ 3.09
CYLD-208ENST00000564634 PXDNLA1KZ92 1463 aa34.35■■■■□ 3.09
CYLD-208ENST00000564634 KIAA1551Q9HCM1 1747 aa34.34■■■■□ 3.09
CYLD-208ENST00000564634 PER1O15534 1290 aaPredicted RBP34.33■■■■□ 3.09
CYLD-208ENST00000564634 HSPA6P17066 643 aa34.33■■■■□ 3.09
CYLD-208ENST00000564634 N4BP2Q86UW6 1770 aaPredicted RBP34.33■■■■□ 3.09
CYLD-208ENST00000564634 KIF13BQ9NQT8 1826 aa34.32■■■■□ 3.08
CYLD-208ENST00000564634 AMER1Q5JTC6 1135 aaPredicted RBP34.31■■■■□ 3.08
CYLD-208ENST00000564634 IFFO2Q5TF58 517 aa34.31■■■■□ 3.08
CYLD-208ENST00000564634 MORC1Q86VD1 984 aa34.31■■■■□ 3.08
CYLD-208ENST00000564634 SLC4A9Q96Q91 983 aa34.31■■■■□ 3.08
CYLD-208ENST00000564634 RBM42Q9BTD8 480 aaKnown RBP34.31■■■■□ 3.08
CYLD-208ENST00000564634 RTCBQ9Y3I0 505 aaKnown RBP34.31■■■■□ 3.08
CYLD-208ENST00000564634 COL5A3P25940 1745 aaPredicted RBP34.3■■■■□ 3.08
CYLD-208ENST00000564634 TRAPPC3LQ5T215 181 aa34.28■■■■□ 3.08
CYLD-208ENST00000564634 C10orf71Q711Q0 1435 aa34.28■■■■□ 3.08
CYLD-208ENST00000564634 ZNF831Q5JPB2 1677 aa34.27■■■■□ 3.08
CYLD-208ENST00000564634 PLEKHG2Q9H7P9 1386 aa34.26■■■■□ 3.08
CYLD-208ENST00000564634 BCS1LQ9Y276 419 aa34.26■■■■□ 3.08
CYLD-208ENST00000564634 KDM6AO15550 1401 aaPredicted RBP34.26■■■■□ 3.07
CYLD-208ENST00000564634 A0A0G2JLW4 131 aa34.25■■■■□ 3.07
CYLD-208ENST00000564634 ERVV-2B6SEH9 535 aa34.25■■■■□ 3.07
CYLD-208ENST00000564634 KIF3CO14782 793 aa34.25■■■■□ 3.07
CYLD-208ENST00000564634 C4AP0C0L4 1744 aa34.24■■■■□ 3.07
CYLD-208ENST00000564634 ZNF530Q6P9A1 599 aaPredicted RBP34.23■■■■□ 3.07
CYLD-208ENST00000564634 ARHGEF1Q92888 912 aaKnown RBP34.23■■■■□ 3.07
CYLD-208ENST00000564634 DCAF5Q96JK2 942 aa34.23■■■■□ 3.07
CYLD-208ENST00000564634 NLGN1Q8N2Q7 840 aa34.22■■■■□ 3.07
CYLD-208ENST00000564634 CNTNAP4Q9C0A0 1308 aa34.22■■■■□ 3.07
CYLD-208ENST00000564634 HSP90AB1P08238 724 aaKnown RBP34.21■■■■□ 3.07
CYLD-208ENST00000564634 ZEB1P37275 1124 aaPredicted RBP34.21■■■■□ 3.07
CYLD-208ENST00000564634 TGFB2P61812 414 aa34.21■■■■□ 3.07
CYLD-208ENST00000564634 PLEKHO1Q53GL0 409 aaPredicted RBP34.21■■■■□ 3.07
CYLD-208ENST00000564634 GYS1P13807 737 aa34.2■■■■□ 3.07
CYLD-208ENST00000564634 ADRA2BP18089 450 aa34.19■■■■□ 3.06
CYLD-208ENST00000564634 RFC4P35249 363 aa34.19■■■■□ 3.06
CYLD-208ENST00000564634 CABP4P57796 275 aa34.19■■■■□ 3.06
CYLD-208ENST00000564634 RC3H1Q5TC82 1133 aaKnown RBP34.19■■■■□ 3.06
CYLD-208ENST00000564634 CCDC87Q9NVE4 849 aa34.19■■■■□ 3.06
CYLD-208ENST00000564634 DPEP1P16444 411 aa34.18■■■■□ 3.06
CYLD-208ENST00000564634 NPC1L1Q9UHC9 1359 aa34.18■■■■□ 3.06
CYLD-208ENST00000564634 MYH14Q7Z406 1995 aaKnown RBP34.18■■■■□ 3.06
CYLD-208ENST00000564634 RPS6KA4O75676 772 aa34.17■■■■□ 3.06
CYLD-208ENST00000564634 ARHGAP27Q6ZUM4 889 aa34.17■■■■□ 3.06
CYLD-208ENST00000564634 AEBP1Q8IUX7 1158 aa34.17■■■■□ 3.06
CYLD-208ENST00000564634 CC2D1BQ5T0F9 858 aaKnown RBP34.16■■■■□ 3.06
CYLD-208ENST00000564634 PARP3Q9Y6F1 533 aa34.16■■■■□ 3.06
CYLD-208ENST00000564634 BRCA1P38398 1863 aaKnown RBP34.16■■■■□ 3.06
CYLD-208ENST00000564634 PTCD1O75127 700 aaKnown RBP34.15■■■■□ 3.06
CYLD-208ENST00000564634 FCHSD2O94868 740 aa34.15■■■■□ 3.06
CYLD-208ENST00000564634 AMOTQ4VCS5 1084 aa34.13■■■■□ 3.05
CYLD-208ENST00000564634 MTHFSP49914 203 aa34.12■■■■□ 3.05
CYLD-208ENST00000564634 C1orf141Q5JVX7 400 aa34.12■■■■□ 3.05
CYLD-208ENST00000564634 TJP1Q07157 1748 aa34.11■■■■□ 3.05
CYLD-208ENST00000564634 CRKLP46109 303 aaKnown RBP34.1■■■■□ 3.05
CYLD-208ENST00000564634 SRP68Q9UHB9 627 aaKnown RBP34.1■■■■□ 3.05
CYLD-208ENST00000564634 NMRK2Q9NPI5 230 aa34.08■■■■□ 3.05
CYLD-208ENST00000564634 NFATC2IPQ8NCF5 419 aa34.07■■■■□ 3.04
CYLD-208ENST00000564634 KCNA3P22001 575 aa34.06■■■■□ 3.04
CYLD-208ENST00000564634 ARFGEF1Q9Y6D6 1849 aa34.06■■■■□ 3.04
CYLD-208ENST00000564634 FKBP8Q14318 412 aa34.05■■■■□ 3.04
CYLD-208ENST00000564634 SULT6B1Q6IMI4 303 aa34.05■■■■□ 3.04
CYLD-208ENST00000564634 USP42Q9H9J4 1324 aaKnown RBP34.04■■■■□ 3.04
CYLD-208ENST00000564634 TOMM70O94826 608 aa34.04■■■■□ 3.04
CYLD-208ENST00000564634 DDR1Q08345 913 aa34.04■■■■□ 3.04
CYLD-208ENST00000564634 APLP1P51693 650 aa34.03■■■■□ 3.04
CYLD-208ENST00000564634 CNGB1Q14028 1251 aaPredicted RBP34.03■■■■□ 3.04
CYLD-208ENST00000564634 C9orf131Q5VYM1 1079 aa34.03■■■■□ 3.04
CYLD-208ENST00000564634 SCN11AQ9UI33 1791 aa34.03■■■■□ 3.04
CYLD-208ENST00000564634 PIM2Q9P1W9 311 aa34.01■■■■□ 3.03
CYLD-208ENST00000564634 ADAMTS7Q9UKP4 1686 aa33.99■■■■□ 3.03
CYLD-208ENST00000564634 DALRD3Q5D0E6 543 aaKnown RBP33.98■■■■□ 3.03
CYLD-208ENST00000564634 CHRNA5P30532 468 aa33.97■■■■□ 3.03
CYLD-208ENST00000564634 INTS5Q6P9B9 1019 aaKnown RBP33.97■■■■□ 3.03
CYLD-208ENST00000564634 IL13P35225 146 aa33.96■■■■□ 3.03
CYLD-208ENST00000564634 KCPQ6ZWJ8 1503 aa33.95■■■■□ 3.03
CYLD-208ENST00000564634 DNAJC10Q8IXB1 793 aa33.95■■■■□ 3.03
CYLD-208ENST00000564634 RNF181Q9P0P0 153 aa33.94■■■■□ 3.02
CYLD-208ENST00000564634 WDR90Q96KV7 1748 aa33.93■■■■□ 3.02
CYLD-208ENST00000564634 POLRMTO00411 1230 aaKnown RBP33.93■■■■□ 3.02
CYLD-208ENST00000564634 C16orf71Q8IYS4 520 aaPredicted RBP33.93■■■■□ 3.02
CYLD-208ENST00000564634 AKAP4Q5JQC9 854 aa33.91■■■■□ 3.02
CYLD-208ENST00000564634 USPL1Q5W0Q7 1092 aa33.91■■■■□ 3.02
CYLD-208ENST00000564634 DNAJC5GQ8N7S2 189 aa33.91■■■■□ 3.02
CYLD-208ENST00000564634 SOS1Q07889 1333 aaPredicted RBP33.9■■■■□ 3.02
CYLD-208ENST00000564634 ZPR1O75312 459 aa33.9■■■■□ 3.02
CYLD-208ENST00000564634 RBM46Q8TBY0 533 aaKnown RBP33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms