RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 PHKG2P15735 406 aa19.79■□□□□ 0.76
COMMD4-210ENST00000564587 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
COMMD4-210ENST00000564587 MPRIPQ6WCQ1 1025 aa19.79■□□□□ 0.76
COMMD4-210ENST00000564587 KDM3BQ7LBC6 1761 aa19.78■□□□□ 0.76
COMMD4-210ENST00000564587 COL16A1Q07092 1604 aaPredicted RBP19.78■□□□□ 0.76
COMMD4-210ENST00000564587 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
COMMD4-210ENST00000564587 STK31Q9BXU1 1019 aa19.78■□□□□ 0.76
COMMD4-210ENST00000564587 DCAF5Q96JK2 942 aa19.77■□□□□ 0.76
COMMD4-210ENST00000564587 SCN11AQ9UI33 1791 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 IL2RBP14784 551 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 ITPRIPQ8IWB1 547 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 ABCC4O15439 1325 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 KDM2BQ8NHM5 1336 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
COMMD4-210ENST00000564587 EIF4A1P60842 406 aaKnown RBP19.75■□□□□ 0.75
COMMD4-210ENST00000564587 KRT24Q2M2I5 525 aa19.75■□□□□ 0.75
COMMD4-210ENST00000564587 TMEM57Q8N5G2 664 aa19.75■□□□□ 0.75
COMMD4-210ENST00000564587 ZCRB1Q8TBF4 217 aaKnown RBP19.75■□□□□ 0.75
COMMD4-210ENST00000564587 TNNQ9UQP3 1299 aa19.75■□□□□ 0.75
COMMD4-210ENST00000564587 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-210ENST00000564587 STRN4Q9NRL3 753 aa19.74■□□□□ 0.75
COMMD4-210ENST00000564587 SLC4A2P04920 1241 aa19.73■□□□□ 0.75
COMMD4-210ENST00000564587 SLC52A2Q9HAB3 445 aa19.73■□□□□ 0.75
COMMD4-210ENST00000564587 BTG4Q9NY30 223 aa19.73■□□□□ 0.75
COMMD4-210ENST00000564587 LARP1Q6PKG0 1096 aaKnown RBP19.72■□□□□ 0.75
COMMD4-210ENST00000564587 RWDD1Q9H446 243 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-210ENST00000564587 MRC1P22897 1456 aa19.71■□□□□ 0.75
COMMD4-210ENST00000564587 KDM6AO15550 1401 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-210ENST00000564587 TCERG1O14776 1098 aaKnown RBP19.7■□□□□ 0.74
COMMD4-210ENST00000564587 CYP27B1O15528 508 aa19.7■□□□□ 0.74
COMMD4-210ENST00000564587 HDGFL1Q5TGJ6 251 aa19.7■□□□□ 0.74
COMMD4-210ENST00000564587 INTS3Q68E01 1043 aaKnown RBP19.7■□□□□ 0.74
COMMD4-210ENST00000564587 NKX1-1Q15270 411 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-210ENST00000564587 ZBTB40Q9NUA8 1239 aa19.69■□□□□ 0.74
COMMD4-210ENST00000564587 HEG1Q9ULI3 1381 aa19.69■□□□□ 0.74
COMMD4-210ENST00000564587 ERVV-2B6SEH9 535 aa19.68■□□□□ 0.74
COMMD4-210ENST00000564587 CDCA7Q9BWT1 371 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-210ENST00000564587 ZBTB7BO15156 539 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-210ENST00000564587 CCT4P50991 539 aaKnown RBP19.66■□□□□ 0.74
COMMD4-210ENST00000564587 CABP4P57796 275 aa19.66■□□□□ 0.74
COMMD4-210ENST00000564587 HDAC1Q13547 482 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-210ENST00000564587 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
COMMD4-210ENST00000564587 ZNF790Q6PG37 636 aa19.65■□□□□ 0.74
COMMD4-210ENST00000564587 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
COMMD4-210ENST00000564587 JCADQ9P266 1359 aa19.65■□□□□ 0.74
COMMD4-210ENST00000564587 PLCH1Q4KWH8 1693 aa19.65■□□□□ 0.74
COMMD4-210ENST00000564587 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-210ENST00000564587 FLIIQ13045 1269 aa19.64■□□□□ 0.73
COMMD4-210ENST00000564587 TTC5Q8N0Z6 440 aa19.64■□□□□ 0.73
COMMD4-210ENST00000564587 NFATC2IPQ8NCF5 419 aa19.64■□□□□ 0.73
COMMD4-210ENST00000564587 RGS12O14924 1447 aa19.64■□□□□ 0.73
COMMD4-210ENST00000564587 NWD2Q9ULI1 1742 aa19.64■□□□□ 0.73
COMMD4-210ENST00000564587 KCNQ3O43525 872 aa19.63■□□□□ 0.73
COMMD4-210ENST00000564587 IGHDP01880 384 aa19.63■□□□□ 0.73
COMMD4-210ENST00000564587 TSHZ2Q9NRE2 1034 aa19.63■□□□□ 0.73
COMMD4-210ENST00000564587 DBF4Q9UBU7 674 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-210ENST00000564587 PXDNLA1KZ92 1463 aa19.62■□□□□ 0.73
COMMD4-210ENST00000564587 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
COMMD4-210ENST00000564587 ADAMTS2O95450 1211 aa19.61■□□□□ 0.73
COMMD4-210ENST00000564587 EIF2S2P20042 333 aaKnown RBP19.61■□□□□ 0.73
COMMD4-210ENST00000564587 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-210ENST00000564587 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
COMMD4-210ENST00000564587 NRAPQ86VF7 1730 aa19.6■□□□□ 0.73
COMMD4-210ENST00000564587 SHANK3Q9BYB0 1731 aa19.6■□□□□ 0.73
COMMD4-210ENST00000564587 G2E3Q7L622 706 aa19.6■□□□□ 0.73
COMMD4-210ENST00000564587 SPATA31A6Q5VVP1 1343 aa19.59■□□□□ 0.73
COMMD4-210ENST00000564587 SNRPA1P09661 255 aaKnown RBP19.59■□□□□ 0.73
COMMD4-210ENST00000564587 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
COMMD4-210ENST00000564587 HYPKQ9NX55 129 aa19.59■□□□□ 0.73
COMMD4-210ENST00000564587 SLIT2O94813 1529 aa19.58■□□□□ 0.73
COMMD4-210ENST00000564587 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-210ENST00000564587 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-210ENST00000564587 EXOC5O00471 708 aa19.58■□□□□ 0.72
COMMD4-210ENST00000564587 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-210ENST00000564587 NECTIN2Q92692 538 aa19.58■□□□□ 0.72
COMMD4-210ENST00000564587 USP35Q9P2H5 1018 aa19.58■□□□□ 0.72
COMMD4-210ENST00000564587 WNK3Q9BYP7 1800 aa19.58■□□□□ 0.72
COMMD4-210ENST00000564587 UPF1Q92900 1129 aaKnown RBP eCLIP19.57■□□□□ 0.72
COMMD4-210ENST00000564587 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
COMMD4-210ENST00000564587 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-210ENST00000564587 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
COMMD4-210ENST00000564587 RPAP2Q8IXW5 612 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-210ENST00000564587 DDX21Q9NR30 783 aaKnown RBP eCLIP19.56■□□□□ 0.72
COMMD4-210ENST00000564587 LRP6O75581 1613 aa19.55■□□□□ 0.72
COMMD4-210ENST00000564587 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
COMMD4-210ENST00000564587 GNAI3P08754 354 aa19.55■□□□□ 0.72
COMMD4-210ENST00000564587 SLC39A6Q13433 755 aa19.55■□□□□ 0.72
COMMD4-210ENST00000564587 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
COMMD4-210ENST00000564587 SMC5Q8IY18 1101 aa19.55■□□□□ 0.72
COMMD4-210ENST00000564587 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-210ENST00000564587 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
COMMD4-210ENST00000564587 BARGINQ6ZT62 677 aa19.54■□□□□ 0.72
COMMD4-210ENST00000564587 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
COMMD4-210ENST00000564587 SPATA31A5Q5VU36 1347 aa19.53■□□□□ 0.72
COMMD4-210ENST00000564587 SPATA31A7Q8IWB4 1347 aa19.53■□□□□ 0.72
COMMD4-210ENST00000564587 TNS2Q63HR2 1409 aa19.53■□□□□ 0.72
COMMD4-210ENST00000564587 TMOD3Q9NYL9 352 aa19.53■□□□□ 0.72
COMMD4-210ENST00000564587 F6X3S4 739 aa19.52■□□□□ 0.72
COMMD4-210ENST00000564587 UNC5CLQ8IV45 518 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms