RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 ITPK1Q13572 414 aa34.12■■■■□ 3.05
AC009041.3-201ENST00000564390 AMIGO3Q86WK7 504 aa34.12■■■■□ 3.05
AC009041.3-201ENST00000564390 U2SURPO15042 1029 aaKnown RBP34.1■■■■□ 3.05
AC009041.3-201ENST00000564390 ATP6V1AP38606 617 aa34.1■■■■□ 3.05
AC009041.3-201ENST00000564390 SMIM5Q71RC9 77 aa34.1■■■■□ 3.05
AC009041.3-201ENST00000564390 MSL1Q68DK7 614 aa34.09■■■■□ 3.05
AC009041.3-201ENST00000564390 PHF14O94880 888 aa34.08■■■■□ 3.05
AC009041.3-201ENST00000564390 POLD1P28340 1107 aa34.08■■■■□ 3.05
AC009041.3-201ENST00000564390 SYT17Q9BSW7 474 aa34.08■■■■□ 3.05
AC009041.3-201ENST00000564390 HMGB2P26583 209 aaKnown RBP34.07■■■■□ 3.04
AC009041.3-201ENST00000564390 AKAP4Q5JQC9 854 aa34.07■■■■□ 3.04
AC009041.3-201ENST00000564390 RBM42Q9BTD8 480 aaKnown RBP34.07■■■■□ 3.04
AC009041.3-201ENST00000564390 VIRMAQ69YN4 1812 aaKnown RBP34.07■■■■□ 3.04
AC009041.3-201ENST00000564390 ZNF831Q5JPB2 1677 aa34.06■■■■□ 3.04
AC009041.3-201ENST00000564390 MTHFSDQ2M296 383 aaKnown RBP34.05■■■■□ 3.04
AC009041.3-201ENST00000564390 KLHL34Q8N239 644 aa34.05■■■■□ 3.04
AC009041.3-201ENST00000564390 NFATC2IPQ8NCF5 419 aa34.05■■■■□ 3.04
AC009041.3-201ENST00000564390 SLC4A9Q96Q91 983 aa34.05■■■■□ 3.04
AC009041.3-201ENST00000564390 PPP2R1AP30153 589 aa34.04■■■■□ 3.04
AC009041.3-201ENST00000564390 COL5A3P25940 1745 aaPredicted RBP34.04■■■■□ 3.04
AC009041.3-201ENST00000564390 FLAD1Q8NFF5 587 aa34.03■■■■□ 3.04
AC009041.3-201ENST00000564390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.02■■■■□ 3.04
AC009041.3-201ENST00000564390 GNPATO15228 680 aa34.02■■■■□ 3.04
AC009041.3-201ENST00000564390 CFAP53Q96M91 514 aa34.02■■■■□ 3.04
AC009041.3-201ENST00000564390 LGR6Q9HBX8 967 aa34.02■■■■□ 3.04
AC009041.3-201ENST00000564390 MRC1P22897 1456 aa34.01■■■■□ 3.04
AC009041.3-201ENST00000564390 ADAMTS7Q9UKP4 1686 aa34.01■■■■□ 3.04
AC009041.3-201ENST00000564390 MAP3K5Q99683 1374 aa34■■■■□ 3.03
AC009041.3-201ENST00000564390 PTCD1O75127 700 aaKnown RBP33.99■■■■□ 3.03
AC009041.3-201ENST00000564390 DCAF8L1A6NGE4 600 aa33.98■■■■□ 3.03
AC009041.3-201ENST00000564390 RNMTO43148 476 aaKnown RBP33.98■■■■□ 3.03
AC009041.3-201ENST00000564390 TJP1Q07157 1748 aa33.98■■■■□ 3.03
AC009041.3-201ENST00000564390 SSFA2P28290 1259 aa33.97■■■■□ 3.03
AC009041.3-201ENST00000564390 SLC52A2Q9HAB3 445 aa33.97■■■■□ 3.03
AC009041.3-201ENST00000564390 CICQ96RK0 1608 aaPredicted RBP33.93■■■■□ 3.02
AC009041.3-201ENST00000564390 PRKAR2BP31323 418 aa33.91■■■■□ 3.02
AC009041.3-201ENST00000564390 CNTNAP4Q9C0A0 1308 aa33.9■■■■□ 3.02
AC009041.3-201ENST00000564390 NLGN2Q8NFZ4 835 aa33.9■■■■□ 3.02
AC009041.3-201ENST00000564390 RSPH6AQ9H0K4 717 aa33.9■■■■□ 3.02
AC009041.3-201ENST00000564390 NUDCQ9Y266 331 aa33.9■■■■□ 3.02
AC009041.3-201ENST00000564390 SLC39A6Q13433 755 aa33.89■■■■□ 3.02
AC009041.3-201ENST00000564390 U2AF1L5P0DN76 240 aaPredicted RBP33.88■■■■□ 3.01
AC009041.3-201ENST00000564390 U2AF1Q01081 240 aaKnown RBP eCLIP33.88■■■■□ 3.01
AC009041.3-201ENST00000564390 GAS2L2Q8NHY3 880 aa33.88■■■■□ 3.01
AC009041.3-201ENST00000564390 RTCBQ9Y3I0 505 aaKnown RBP33.88■■■■□ 3.01
AC009041.3-201ENST00000564390 MYH14Q7Z406 1995 aaKnown RBP33.88■■■■□ 3.01
AC009041.3-201ENST00000564390 KCPQ6ZWJ8 1503 aa33.88■■■■□ 3.01
AC009041.3-201ENST00000564390 PHACTR3Q96KR7 559 aa33.87■■■■□ 3.01
AC009041.3-201ENST00000564390 RC3H1Q5TC82 1133 aaKnown RBP33.86■■■■□ 3.01
AC009041.3-201ENST00000564390 C4AP0C0L4 1744 aa33.86■■■■□ 3.01
AC009041.3-201ENST00000564390 GNAT3A8MTJ3 354 aa33.84■■■■□ 3.01
AC009041.3-201ENST00000564390 CRKLP46109 303 aaKnown RBP33.84■■■■□ 3.01
AC009041.3-201ENST00000564390 UBR2Q8IWV8 1755 aa33.83■■■■□ 3.01
AC009041.3-201ENST00000564390 YY1P25490 414 aa33.83■■■■□ 3.01
AC009041.3-201ENST00000564390 SIPA1L3O60292 1781 aaPredicted RBP33.83■■■■□ 3.01
AC009041.3-201ENST00000564390 TRAPPC3LQ5T215 181 aa33.82■■■■□ 3
AC009041.3-201ENST00000564390 IL17REQ8NFR9 667 aa33.82■■■■□ 3
AC009041.3-201ENST00000564390 RPS6KA4O75676 772 aa33.81■■■■□ 3
AC009041.3-201ENST00000564390 DNAJC10Q8IXB1 793 aa33.81■■■■□ 3
AC009041.3-201ENST00000564390 PELP1Q8IZL8 1130 aaKnown RBP33.8■■■■□ 3
AC009041.3-201ENST00000564390 ARHGEF1Q92888 912 aaKnown RBP33.8■■■■□ 3
AC009041.3-201ENST00000564390 DDX10Q13206 875 aaKnown RBP33.79■■■■□ 3
AC009041.3-201ENST00000564390 ADRA2BP18089 450 aa33.78■■■■□ 3
AC009041.3-201ENST00000564390 TEFQ10587 303 aa33.78■■■■□ 3
AC009041.3-201ENST00000564390 GPR162Q16538 588 aa33.78■■■■□ 3
AC009041.3-201ENST00000564390 FCHSD2O94868 740 aa33.75■■■□□ 2.99
AC009041.3-201ENST00000564390 RFC4P35249 363 aa33.75■■■□□ 2.99
AC009041.3-201ENST00000564390 CEMIPQ8WUJ3 1361 aa33.74■■■□□ 2.99
AC009041.3-201ENST00000564390 MMP10P09238 476 aa33.74■■■□□ 2.99
AC009041.3-201ENST00000564390 INTS5Q6P9B9 1019 aaKnown RBP33.74■■■□□ 2.99
AC009041.3-201ENST00000564390 TTC5Q8N0Z6 440 aa33.73■■■□□ 2.99
AC009041.3-201ENST00000564390 CCDC87Q9NVE4 849 aa33.73■■■□□ 2.99
AC009041.3-201ENST00000564390 CD2APQ9Y5K6 639 aa33.73■■■□□ 2.99
AC009041.3-201ENST00000564390 UTRNP46939 3433 aa33.72■■■□□ 2.99
AC009041.3-201ENST00000564390 CYP19A1P11511 503 aaPredicted RBP33.71■■■□□ 2.99
AC009041.3-201ENST00000564390 GYS1P13807 737 aa33.71■■■□□ 2.99
AC009041.3-201ENST00000564390 SRP68Q9UHB9 627 aaKnown RBP33.71■■■□□ 2.99
AC009041.3-201ENST00000564390 ZNF790Q6PG37 636 aa33.68■■■□□ 2.98
AC009041.3-201ENST00000564390 MCM10Q7L590 875 aa33.68■■■□□ 2.98
AC009041.3-201ENST00000564390 NLGN1Q8N2Q7 840 aa33.68■■■□□ 2.98
AC009041.3-201ENST00000564390 ZNF496Q96IT1 587 aaPredicted RBP33.68■■■□□ 2.98
AC009041.3-201ENST00000564390 YBX3P16989 372 aaKnown RBP eCLIP33.67■■■□□ 2.98
AC009041.3-201ENST00000564390 VSIG10Q8N0Z9 540 aa33.67■■■□□ 2.98
AC009041.3-201ENST00000564390 ZBTB1Q9Y2K1 713 aa33.67■■■□□ 2.98
AC009041.3-201ENST00000564390 SOS1Q07889 1333 aaPredicted RBP33.67■■■□□ 2.98
AC009041.3-201ENST00000564390 USP42Q9H9J4 1324 aaKnown RBP33.67■■■□□ 2.98
AC009041.3-201ENST00000564390 GOLGB1Q14789 3259 aaKnown RBP33.66■■■□□ 2.98
AC009041.3-201ENST00000564390 CHD4Q14839 1912 aa33.65■■■□□ 2.98
AC009041.3-201ENST00000564390 DCTN1Q14203 1278 aa33.65■■■□□ 2.98
AC009041.3-201ENST00000564390 RALBP1Q15311 655 aa33.65■■■□□ 2.98
AC009041.3-201ENST00000564390 RTF1Q92541 710 aaKnown RBP33.65■■■□□ 2.98
AC009041.3-201ENST00000564390 HEG1Q9ULI3 1381 aa33.64■■■□□ 2.98
AC009041.3-201ENST00000564390 WWC3Q9ULE0 1092 aa33.64■■■□□ 2.98
AC009041.3-201ENST00000564390 COL15A1P39059 1388 aa33.63■■■□□ 2.97
AC009041.3-201ENST00000564390 KCNQ3O43525 872 aa33.63■■■□□ 2.97
AC009041.3-201ENST00000564390 DLG5Q8TDM6 1919 aa33.63■■■□□ 2.97
AC009041.3-201ENST00000564390 BTBD11A6QL63 1104 aa33.62■■■□□ 2.97
AC009041.3-201ENST00000564390 FKBP8Q14318 412 aa33.62■■■□□ 2.97
AC009041.3-201ENST00000564390 KIF13BQ9NQT8 1826 aa33.62■■■□□ 2.97
AC009041.3-201ENST00000564390 C10orf71Q711Q0 1435 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms