RNA–Protein interactions for RNA: ENST00000563976.1

CYLD-206, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 4

Gene CYLD, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-206ENST00000563976 STK17AQ9UEE5 414 aa8.74□□□□□ -1.01
CYLD-206ENST00000563976 SERTAD1Q9UHV2 236 aa8.74□□□□□ -1.01
CYLD-206ENST00000563976 DYRK1BQ9Y463 629 aa8.74□□□□□ -1.01
CYLD-206ENST00000563976 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
CYLD-206ENST00000563976 GPR25O00155 361 aa8.73□□□□□ -1.01
CYLD-206ENST00000563976 INHAP05111 366 aa8.73□□□□□ -1.01
CYLD-206ENST00000563976 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
CYLD-206ENST00000563976 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
CYLD-206ENST00000563976 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
CYLD-206ENST00000563976 TMEM229AB2RXF0 380 aa8.72□□□□□ -1.01
CYLD-206ENST00000563976 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
CYLD-206ENST00000563976 C4orf17Q53FE4 359 aa8.72□□□□□ -1.01
CYLD-206ENST00000563976 GNASQ5JWF2 1037 aa8.72□□□□□ -1.01
CYLD-206ENST00000563976 GLMNQ92990 594 aa8.72□□□□□ -1.01
CYLD-206ENST00000563976 GPAMQ9HCL2 828 aa8.72□□□□□ -1.01
CYLD-206ENST00000563976 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
CYLD-206ENST00000563976 GTF2IP78347 998 aa8.71□□□□□ -1.02
CYLD-206ENST00000563976 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
CYLD-206ENST00000563976 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.02
CYLD-206ENST00000563976 PSME1Q06323 249 aa8.7□□□□□ -1.02
CYLD-206ENST00000563976 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
CYLD-206ENST00000563976 USP17L3A6NCW0 530 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 USP17L4A6NCW7 530 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 F11P03951 625 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 GAS6Q14393 721 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 USP17L2Q6R6M4 530 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 USP17L1Q7RTZ2 530 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 PPARGC1BQ86YN6 1023 aaKnown RBP8.69□□□□□ -1.02
CYLD-206ENST00000563976 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
CYLD-206ENST00000563976 RHBDD1Q8TEB9 315 aa8.69□□□□□ -1.02
CYLD-206ENST00000563976 GTPBP3Q969Y2 492 aaKnown RBP8.69□□□□□ -1.02
CYLD-206ENST00000563976 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
CYLD-206ENST00000563976 PLA2G4AP47712 749 aa8.68□□□□□ -1.02
CYLD-206ENST00000563976 SMTNP53814 917 aa8.68□□□□□ -1.02
CYLD-206ENST00000563976 KRTAP4-6Q9BYQ5 205 aa8.68□□□□□ -1.02
CYLD-206ENST00000563976 RUBCNLQ9H714 662 aa8.68□□□□□ -1.02
CYLD-206ENST00000563976 USP3Q9Y6I4 520 aa8.68□□□□□ -1.02
CYLD-206ENST00000563976 A6NJR5 290 aa8.67□□□□□ -1.02
CYLD-206ENST00000563976 H7C1W4 665 aa8.67□□□□□ -1.02
CYLD-206ENST00000563976 ATP9BO43861 1147 aa8.67□□□□□ -1.02
CYLD-206ENST00000563976 LZTS3O60299 673 aaPredicted RBP8.67□□□□□ -1.02
CYLD-206ENST00000563976 NUCKS1Q9H1E3 243 aaKnown RBP8.67□□□□□ -1.02
CYLD-206ENST00000563976 A0A1B0GTH6 734 aa8.66□□□□□ -1.02
CYLD-206ENST00000563976 THBS1P07996 1170 aa8.66□□□□□ -1.02
CYLD-206ENST00000563976 WHAMMQ8TF30 809 aa8.66□□□□□ -1.02
CYLD-206ENST00000563976 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
CYLD-206ENST00000563976 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
CYLD-206ENST00000563976 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 A6NJY4 79 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 MSX1P28360 303 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 CLDN10P78369 228 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 GMCL1Q96IK5 515 aa8.65□□□□□ -1.02
CYLD-206ENST00000563976 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.02
CYLD-206ENST00000563976 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
CYLD-206ENST00000563976 FOXR1Q6PIV2 292 aa8.64□□□□□ -1.03
CYLD-206ENST00000563976 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
CYLD-206ENST00000563976 SLC4A9Q96Q91 983 aa8.64□□□□□ -1.03
CYLD-206ENST00000563976 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
CYLD-206ENST00000563976 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
CYLD-206ENST00000563976 ADAMTS2O95450 1211 aa8.63□□□□□ -1.03
CYLD-206ENST00000563976 MTFR1Q15390 333 aa8.63□□□□□ -1.03
CYLD-206ENST00000563976 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
CYLD-206ENST00000563976 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
CYLD-206ENST00000563976 NIFKQ9BYG3 293 aaKnown RBP8.63□□□□□ -1.03
CYLD-206ENST00000563976 ZNF777Q9ULD5 760 aaPredicted RBP8.63□□□□□ -1.03
CYLD-206ENST00000563976 IQSEC3Q9UPP2 1182 aaPredicted RBP8.63□□□□□ -1.03
CYLD-206ENST00000563976 PARP3Q9Y6F1 533 aa8.63□□□□□ -1.03
CYLD-206ENST00000563976 PALM3A6NDB9 673 aaPredicted RBP8.62□□□□□ -1.03
CYLD-206ENST00000563976 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 TBCELQ5QJ74 424 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 OGFOD1Q8N543 542 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 ZNF594Q96JF6 807 aaPredicted RBP8.62□□□□□ -1.03
CYLD-206ENST00000563976 TRERF1Q96PN7 1200 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 DNAAF2Q9NVR5 837 aaKnown RBP8.62□□□□□ -1.03
CYLD-206ENST00000563976 CABP1Q9NZU7 370 aa8.62□□□□□ -1.03
CYLD-206ENST00000563976 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
CYLD-206ENST00000563976 BACH1O14867 736 aa8.61□□□□□ -1.03
CYLD-206ENST00000563976 SLURP2P0DP57 97 aa8.61□□□□□ -1.03
CYLD-206ENST00000563976 SRSF11Q05519 484 aaKnown RBP8.61□□□□□ -1.03
CYLD-206ENST00000563976 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
CYLD-206ENST00000563976 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
CYLD-206ENST00000563976 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
CYLD-206ENST00000563976 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
CYLD-206ENST00000563976 ATP4AP20648 1035 aa8.6□□□□□ -1.03
CYLD-206ENST00000563976 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
CYLD-206ENST00000563976 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
CYLD-206ENST00000563976 LYPD4Q6UWN0 246 aa8.6□□□□□ -1.03
CYLD-206ENST00000563976 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
CYLD-206ENST00000563976 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
CYLD-206ENST00000563976 IGF1RP08069 1367 aa8.6□□□□□ -1.03
CYLD-206ENST00000563976 EPHA4P54764 986 aa8.59□□□□□ -1.03
CYLD-206ENST00000563976 SFI1A8K8P3 1242 aa8.58□□□□□ -1.04
CYLD-206ENST00000563976 MX2P20592 715 aa8.58□□□□□ -1.04
CYLD-206ENST00000563976 RASA1P20936 1047 aa8.58□□□□□ -1.04
CYLD-206ENST00000563976 EFHC2Q5JST6 749 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms