RNA–Protein interactions for RNA: ENST00000563678.1

CLUHP3-207, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

BASIC

Gene CLUHP3, Length 1,303 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-207ENST00000563678 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
CLUHP3-207ENST00000563678 LINC00116Q8NCU8 138 aa15.61■□□□□ 0.09
CLUHP3-207ENST00000563678 SMC1BQ8NDV3 1235 aa15.61■□□□□ 0.09
CLUHP3-207ENST00000563678 COG3Q96JB2 828 aa15.61■□□□□ 0.09
CLUHP3-207ENST00000563678 KCPQ6ZWJ8 1503 aa15.61■□□□□ 0.09
CLUHP3-207ENST00000563678 ITGB4P16144 1822 aa15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 LOC102724428A0A0B4J2F2 783 aa15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 GNPATO15228 680 aa15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 SIK1P57059 783 aa15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 PKD1L3Q7Z443 1732 aa15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 MAP2P11137 1827 aaKnown RBP15.6■□□□□ 0.09
CLUHP3-207ENST00000563678 BRCA1P38398 1863 aaKnown RBP15.59■□□□□ 0.09
CLUHP3-207ENST00000563678 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
CLUHP3-207ENST00000563678 DPEP1P16444 411 aa15.59■□□□□ 0.09
CLUHP3-207ENST00000563678 PIGBQ92521 554 aa15.59■□□□□ 0.09
CLUHP3-207ENST00000563678 TNRC6CQ9HCJ0 1690 aaKnown RBP15.59■□□□□ 0.09
CLUHP3-207ENST00000563678 ARFGEF1Q9Y6D6 1849 aa15.58■□□□□ 0.09
CLUHP3-207ENST00000563678 CYP27B1O15528 508 aa15.58■□□□□ 0.08
CLUHP3-207ENST00000563678 FBLN1P23142 703 aa15.58■□□□□ 0.08
CLUHP3-207ENST00000563678 RRAGCQ9HB90 399 aa15.58■□□□□ 0.08
CLUHP3-207ENST00000563678 NLGN1Q8N2Q7 840 aa15.57■□□□□ 0.08
CLUHP3-207ENST00000563678 TESK2Q96S53 571 aa15.57■□□□□ 0.08
CLUHP3-207ENST00000563678 CCDC87Q9NVE4 849 aa15.57■□□□□ 0.08
CLUHP3-207ENST00000563678 RNF181Q9P0P0 153 aa15.56■□□□□ 0.08
CLUHP3-207ENST00000563678 TMF1P82094 1093 aa15.55■□□□□ 0.08
CLUHP3-207ENST00000563678 ITPK1Q13572 414 aa15.55■□□□□ 0.08
CLUHP3-207ENST00000563678 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
CLUHP3-207ENST00000563678 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
CLUHP3-207ENST00000563678 RRS1Q15050 365 aaKnown RBP15.54■□□□□ 0.08
CLUHP3-207ENST00000563678 DCAF5Q96JK2 942 aa15.54■□□□□ 0.08
CLUHP3-207ENST00000563678 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
CLUHP3-207ENST00000563678 KIF7Q2M1P5 1343 aa15.54■□□□□ 0.08
CLUHP3-207ENST00000563678 KCNA3P22001 575 aa15.53■□□□□ 0.08
CLUHP3-207ENST00000563678 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
CLUHP3-207ENST00000563678 PIM2Q9P1W9 311 aa15.53■□□□□ 0.08
CLUHP3-207ENST00000563678 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.08
CLUHP3-207ENST00000563678 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.08
CLUHP3-207ENST00000563678 TRAPPC3LQ5T215 181 aa15.52■□□□□ 0.08
CLUHP3-207ENST00000563678 RTCBQ9Y3I0 505 aaKnown RBP15.52■□□□□ 0.08
CLUHP3-207ENST00000563678 PARP3Q9Y6F1 533 aa15.52■□□□□ 0.08
CLUHP3-207ENST00000563678 INSRP06213 1382 aa15.52■□□□□ 0.07
CLUHP3-207ENST00000563678 ADRA2BP18089 450 aa15.51■□□□□ 0.07
CLUHP3-207ENST00000563678 TMOD3Q9NYL9 352 aa15.51■□□□□ 0.07
CLUHP3-207ENST00000563678 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
CLUHP3-207ENST00000563678 ZC3H4Q9UPT8 1303 aaKnown RBP15.51■□□□□ 0.07
CLUHP3-207ENST00000563678 SBF1O95248 1867 aa15.5■□□□□ 0.07
CLUHP3-207ENST00000563678 GYS1P13807 737 aa15.49■□□□□ 0.07
CLUHP3-207ENST00000563678 HSP90AB2PQ58FF8 381 aa15.49■□□□□ 0.07
CLUHP3-207ENST00000563678 VEGFAP15692 232 aaPredicted RBP15.48■□□□□ 0.07
CLUHP3-207ENST00000563678 CDCA8Q53HL2 280 aa15.48■□□□□ 0.07
CLUHP3-207ENST00000563678 ARHGEF1Q92888 912 aaKnown RBP15.48■□□□□ 0.07
CLUHP3-207ENST00000563678 FLT4P35916 1363 aa15.48■□□□□ 0.07
CLUHP3-207ENST00000563678 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
CLUHP3-207ENST00000563678 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
CLUHP3-207ENST00000563678 KDRP35968 1356 aa15.47■□□□□ 0.07
CLUHP3-207ENST00000563678 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
CLUHP3-207ENST00000563678 RFC4P35249 363 aa15.46■□□□□ 0.07
CLUHP3-207ENST00000563678 RC3H1Q5TC82 1133 aaKnown RBP15.46■□□□□ 0.07
CLUHP3-207ENST00000563678 ATG3Q9NT62 314 aa15.46■□□□□ 0.07
CLUHP3-207ENST00000563678 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
CLUHP3-207ENST00000563678 NCAPD2Q15021 1401 aa15.45■□□□□ 0.06
CLUHP3-207ENST00000563678 GLTPD2A6NH11 291 aa15.45■□□□□ 0.06
CLUHP3-207ENST00000563678 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
CLUHP3-207ENST00000563678 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
CLUHP3-207ENST00000563678 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
CLUHP3-207ENST00000563678 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
CLUHP3-207ENST00000563678 FYB1O15117 783 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 RPS6KA4O75676 772 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.43■□□□□ 0.064e-9■□□□□ 10
CLUHP3-207ENST00000563678 LMNB1P20700 586 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 CHRNA5P30532 468 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 RASSF7Q02833 373 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 SLC4A9Q96Q91 983 aa15.43■□□□□ 0.06
CLUHP3-207ENST00000563678 FOXN1O15353 648 aa15.42■□□□□ 0.06
CLUHP3-207ENST00000563678 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
CLUHP3-207ENST00000563678 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
CLUHP3-207ENST00000563678 COL5A3P25940 1745 aaPredicted RBP15.41■□□□□ 0.06
CLUHP3-207ENST00000563678 MYH14Q7Z406 1995 aaKnown RBP15.41■□□□□ 0.06
CLUHP3-207ENST00000563678 PHKG2P15735 406 aa15.41■□□□□ 0.06
CLUHP3-207ENST00000563678 DDR1Q08345 913 aa15.41■□□□□ 0.06
CLUHP3-207ENST00000563678 MKRN1Q9UHC7 482 aaKnown RBP15.41■□□□□ 0.06
CLUHP3-207ENST00000563678 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
CLUHP3-207ENST00000563678 CTCFP49711 727 aaPredicted RBP15.39■□□□□ 0.05
CLUHP3-207ENST00000563678 FKBP8Q14318 412 aa15.39■□□□□ 0.05
CLUHP3-207ENST00000563678 TIAM2Q8IVF5 1701 aa15.38■□□□□ 0.05
CLUHP3-207ENST00000563678 USP42Q9H9J4 1324 aaKnown RBP15.38■□□□□ 0.05
CLUHP3-207ENST00000563678 FAM161AQ3B820 660 aa15.38■□□□□ 0.05
CLUHP3-207ENST00000563678 AIDAQ96BJ3 306 aa15.38■□□□□ 0.05
CLUHP3-207ENST00000563678 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
CLUHP3-207ENST00000563678 POTECB2RU33 542 aa15.37■□□□□ 0.05
CLUHP3-207ENST00000563678 ERVV-2B6SEH9 535 aa15.37■□□□□ 0.05
CLUHP3-207ENST00000563678 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
CLUHP3-207ENST00000563678 CNTNAP1P78357 1384 aa15.37■□□□□ 0.05
CLUHP3-207ENST00000563678 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
CLUHP3-207ENST00000563678 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
CLUHP3-207ENST00000563678 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
CLUHP3-207ENST00000563678 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms