RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 TMF1P82094 1093 aa11.45□□□□□ -0.58
PDXDC1-208ENST00000563522 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-208ENST00000563522 FLAD1Q8NFF5 587 aa11.45□□□□□ -0.58
PDXDC1-208ENST00000563522 LY75O60449 1722 aa11.45□□□□□ -0.58
PDXDC1-208ENST00000563522 DOT1LQ8TEK3 1739 aa11.45□□□□□ -0.58
PDXDC1-208ENST00000563522 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
PDXDC1-208ENST00000563522 MAP3K13O43283 966 aa11.44□□□□□ -0.58
PDXDC1-208ENST00000563522 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
PDXDC1-208ENST00000563522 COL23A1Q86Y22 540 aaPredicted RBP11.44□□□□□ -0.58
PDXDC1-208ENST00000563522 NLGN2Q8NFZ4 835 aa11.44□□□□□ -0.58
PDXDC1-208ENST00000563522 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
PDXDC1-208ENST00000563522 FLT4P35916 1363 aa11.43□□□□□ -0.58
PDXDC1-208ENST00000563522 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
PDXDC1-208ENST00000563522 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
PDXDC1-208ENST00000563522 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
PDXDC1-208ENST00000563522 SHANK3Q9BYB0 1731 aa11.43□□□□□ -0.58
PDXDC1-208ENST00000563522 UTRNP46939 3433 aa11.42□□□□□ -0.58
PDXDC1-208ENST00000563522 USHBP1Q8N6Y0 703 aa11.42□□□□□ -0.58
PDXDC1-208ENST00000563522 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
PDXDC1-208ENST00000563522 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
PDXDC1-208ENST00000563522 PALLDQ8WX93 1383 aa11.41□□□□□ -0.58
PDXDC1-208ENST00000563522 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
PDXDC1-208ENST00000563522 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
PDXDC1-208ENST00000563522 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
PDXDC1-208ENST00000563522 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
PDXDC1-208ENST00000563522 KAT6BQ8WYB5 2073 aa11.4□□□□□ -0.58
PDXDC1-208ENST00000563522 CYP27B1O15528 508 aa11.4□□□□□ -0.58
PDXDC1-208ENST00000563522 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
PDXDC1-208ENST00000563522 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
PDXDC1-208ENST00000563522 PYGBP11216 843 aa11.39□□□□□ -0.59
PDXDC1-208ENST00000563522 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-208ENST00000563522 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
PDXDC1-208ENST00000563522 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-208ENST00000563522 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
PDXDC1-208ENST00000563522 MPRIPQ6WCQ1 1025 aa11.38□□□□□ -0.59
PDXDC1-208ENST00000563522 AK7Q96M32 723 aa11.38□□□□□ -0.59
PDXDC1-208ENST00000563522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.596e-13■■■□□ 19
PDXDC1-208ENST00000563522 SPG7Q9UQ90 795 aa11.38□□□□□ -0.59
PDXDC1-208ENST00000563522 C5P01031 1676 aa11.37□□□□□ -0.59
PDXDC1-208ENST00000563522 PIGBQ92521 554 aa11.37□□□□□ -0.59
PDXDC1-208ENST00000563522 PLEKHG2Q9H7P9 1386 aa11.37□□□□□ -0.59
PDXDC1-208ENST00000563522 SSFA2P28290 1259 aa11.36□□□□□ -0.59
PDXDC1-208ENST00000563522 CARD14Q9BXL6 1004 aa11.36□□□□□ -0.59
PDXDC1-208ENST00000563522 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
PDXDC1-208ENST00000563522 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
PDXDC1-208ENST00000563522 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
PDXDC1-208ENST00000563522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.35□□□□□ -0.59
PDXDC1-208ENST00000563522 C4BP0C0L5 1744 aa11.35□□□□□ -0.59
PDXDC1-208ENST00000563522 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
PDXDC1-208ENST00000563522 ADCY9O60503 1353 aa11.34□□□□□ -0.59
PDXDC1-208ENST00000563522 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
PDXDC1-208ENST00000563522 SIK1P57059 783 aa11.34□□□□□ -0.59
PDXDC1-208ENST00000563522 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
PDXDC1-208ENST00000563522 EYA1Q99502 592 aa11.33□□□□□ -0.6
PDXDC1-208ENST00000563522 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
PDXDC1-208ENST00000563522 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
PDXDC1-208ENST00000563522 TIMELESSQ9UNS1 1208 aa11.33□□□□□ -0.6
PDXDC1-208ENST00000563522 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
PDXDC1-208ENST00000563522 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 PHF14O94880 888 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 TIE1P35590 1138 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 LINC00116Q8NCU8 138 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 ANKRD26Q9UPS8 1709 aa11.32□□□□□ -0.6
PDXDC1-208ENST00000563522 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
PDXDC1-208ENST00000563522 PHKG2P15735 406 aa11.31□□□□□ -0.6
PDXDC1-208ENST00000563522 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
PDXDC1-208ENST00000563522 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
PDXDC1-208ENST00000563522 GNPATO15228 680 aa11.3□□□□□ -0.6
PDXDC1-208ENST00000563522 ASAP1Q9ULH1 1129 aa11.3□□□□□ -0.6
PDXDC1-208ENST00000563522 UBR3Q6ZT12 1888 aa11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 HSP90AB1P08238 724 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 ATP6V1AP38606 617 aa11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 ITPK1Q13572 414 aa11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 MAP2P11137 1827 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 ITGB4P16144 1822 aa11.29□□□□□ -0.6
PDXDC1-208ENST00000563522 KDRP35968 1356 aa11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 HSPA6P17066 643 aa11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 TGFB2P61812 414 aa11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 EIF4A2Q14240 407 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
PDXDC1-208ENST00000563522 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.6
PDXDC1-208ENST00000563522 MMP10P09238 476 aa11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 TRIM26Q12899 539 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 SLC39A7Q92504 469 aa11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 PCGF6Q9BYE7 350 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms