RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 GNPATO15228 680 aa29.09■■■□□ 2.25
GGA2-204ENST00000563047 KDRP35968 1356 aa29.07■■■□□ 2.24
GGA2-204ENST00000563047 GIGYF1O75420 1035 aaPredicted RBP29.06■■■□□ 2.24
GGA2-204ENST00000563047 SENP3-EIF4A1A0A087X0R7 540 aa29.05■■■□□ 2.24
GGA2-204ENST00000563047 ERVV-2B6SEH9 535 aa29.05■■■□□ 2.24
GGA2-204ENST00000563047 DCAF5Q96JK2 942 aa29.05■■■□□ 2.24
GGA2-204ENST00000563047 SLC4A9Q96Q91 983 aa29.05■■■□□ 2.24
GGA2-204ENST00000563047 PLEKHO1Q53GL0 409 aaPredicted RBP29.04■■■□□ 2.24
GGA2-204ENST00000563047 HSP90AB1P08238 724 aaKnown RBP29.03■■■□□ 2.24
GGA2-204ENST00000563047 MORC1Q86VD1 984 aa29.03■■■□□ 2.24
GGA2-204ENST00000563047 KDM6AO15550 1401 aaPredicted RBP29.03■■■□□ 2.24
GGA2-204ENST00000563047 ZNF530Q6P9A1 599 aaPredicted RBP29.02■■■□□ 2.24
GGA2-204ENST00000563047 ZNF831Q5JPB2 1677 aa29.02■■■□□ 2.24
GGA2-204ENST00000563047 AMOTQ4VCS5 1084 aa29.01■■■□□ 2.23
GGA2-204ENST00000563047 AEBP1Q8IUX7 1158 aa29.01■■■□□ 2.23
GGA2-204ENST00000563047 RBM42Q9BTD8 480 aaKnown RBP29.01■■■□□ 2.23
GGA2-204ENST00000563047 WWC3Q9ULE0 1092 aa29■■■□□ 2.23
GGA2-204ENST00000563047 CCER1Q8TC90 406 aaPredicted RBP28.99■■■□□ 2.23
GGA2-204ENST00000563047 ATP10DQ9P241 1426 aa28.99■■■□□ 2.23
GGA2-204ENST00000563047 RTCBQ9Y3I0 505 aaKnown RBP28.98■■■□□ 2.23
GGA2-204ENST00000563047 COL5A3P25940 1745 aaPredicted RBP28.97■■■□□ 2.23
GGA2-204ENST00000563047 MMP10P09238 476 aa28.97■■■□□ 2.23
GGA2-204ENST00000563047 CABP4P57796 275 aa28.97■■■□□ 2.23
GGA2-204ENST00000563047 TRAPPC3LQ5T215 181 aa28.97■■■□□ 2.23
GGA2-204ENST00000563047 RC3H1Q5TC82 1133 aaKnown RBP28.96■■■□□ 2.23
GGA2-204ENST00000563047 KNSTRNQ9Y448 316 aa28.96■■■□□ 2.23
GGA2-204ENST00000563047 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
GGA2-204ENST00000563047 ADCY9O60503 1353 aa28.94■■■□□ 2.22
GGA2-204ENST00000563047 MTHFSP49914 203 aa28.94■■■□□ 2.22
GGA2-204ENST00000563047 SULT6B1Q6IMI4 303 aa28.94■■■□□ 2.22
GGA2-204ENST00000563047 ARHGEF1Q92888 912 aaKnown RBP28.94■■■□□ 2.22
GGA2-204ENST00000563047 IL13P35225 146 aa28.93■■■□□ 2.22
GGA2-204ENST00000563047 C1orf141Q5JVX7 400 aa28.93■■■□□ 2.22
GGA2-204ENST00000563047 ADRA2BP18089 450 aa28.92■■■□□ 2.22
GGA2-204ENST00000563047 KIF13BQ9NQT8 1826 aa28.92■■■□□ 2.22
GGA2-204ENST00000563047 MYH14Q7Z406 1995 aaKnown RBP28.92■■■□□ 2.22
GGA2-204ENST00000563047 RPS6KA4O75676 772 aa28.91■■■□□ 2.22
GGA2-204ENST00000563047 AMER1Q5JTC6 1135 aaPredicted RBP28.91■■■□□ 2.22
GGA2-204ENST00000563047 NLGN1Q8N2Q7 840 aa28.91■■■□□ 2.22
GGA2-204ENST00000563047 CICQ96RK0 1608 aaPredicted RBP28.91■■■□□ 2.22
GGA2-204ENST00000563047 NFATC2IPQ8NCF5 419 aa28.9■■■□□ 2.22
GGA2-204ENST00000563047 KIAA1551Q9HCM1 1747 aa28.9■■■□□ 2.22
GGA2-204ENST00000563047 PXDNLA1KZ92 1463 aa28.9■■■□□ 2.22
GGA2-204ENST00000563047 PTCD1O75127 700 aaKnown RBP28.89■■■□□ 2.22
GGA2-204ENST00000563047 GYS1P13807 737 aa28.89■■■□□ 2.22
GGA2-204ENST00000563047 RFC4P35249 363 aa28.87■■■□□ 2.21
GGA2-204ENST00000563047 GPBP1L1Q9HC44 474 aaPredicted RBP28.87■■■□□ 2.21
GGA2-204ENST00000563047 C10orf71Q711Q0 1435 aa28.86■■■□□ 2.21
GGA2-204ENST00000563047 C4AP0C0L4 1744 aa28.86■■■□□ 2.21
GGA2-204ENST00000563047 N4BP2Q86UW6 1770 aaPredicted RBP28.86■■■□□ 2.21
GGA2-204ENST00000563047 KIF7Q2M1P5 1343 aa28.86■■■□□ 2.21
GGA2-204ENST00000563047 SCN11AQ9UI33 1791 aa28.85■■■□□ 2.21
GGA2-204ENST00000563047 CRKLP46109 303 aaKnown RBP28.85■■■□□ 2.21
GGA2-204ENST00000563047 TGFB2P61812 414 aa28.85■■■□□ 2.21
GGA2-204ENST00000563047 ZNF526Q8TF50 670 aaPredicted RBP28.84■■■□□ 2.21
GGA2-204ENST00000563047 TJP1Q07157 1748 aa28.83■■■□□ 2.21
GGA2-204ENST00000563047 A0A0G2JLW4 131 aa28.83■■■□□ 2.21
GGA2-204ENST00000563047 AKAP4Q5JQC9 854 aa28.82■■■□□ 2.2
GGA2-204ENST00000563047 CCDC87Q9NVE4 849 aa28.81■■■□□ 2.2
GGA2-204ENST00000563047 PARP3Q9Y6F1 533 aa28.81■■■□□ 2.2
GGA2-204ENST00000563047 LGR6Q9HBX8 967 aa28.8■■■□□ 2.2
GGA2-204ENST00000563047 SLC52A2Q9HAB3 445 aa28.79■■■□□ 2.2
GGA2-204ENST00000563047 SRP68Q9UHB9 627 aaKnown RBP28.79■■■□□ 2.2
GGA2-204ENST00000563047 BCS1LQ9Y276 419 aa28.79■■■□□ 2.2
GGA2-204ENST00000563047 PER1O15534 1290 aaPredicted RBP28.78■■■□□ 2.2
GGA2-204ENST00000563047 HMOX1P09601 288 aa28.78■■■□□ 2.2
GGA2-204ENST00000563047 DPEP1P16444 411 aa28.78■■■□□ 2.2
GGA2-204ENST00000563047 CEP350Q5VT06 3117 aa28.77■■■□□ 2.2
GGA2-204ENST00000563047 INTS5Q6P9B9 1019 aaKnown RBP28.77■■■□□ 2.2
GGA2-204ENST00000563047 USP42Q9H9J4 1324 aaKnown RBP28.76■■■□□ 2.19
GGA2-204ENST00000563047 BRCA1P38398 1863 aaKnown RBP28.75■■■□□ 2.19
GGA2-204ENST00000563047 ADAMTS7Q9UKP4 1686 aa28.75■■■□□ 2.19
GGA2-204ENST00000563047 MRC1P22897 1456 aa28.75■■■□□ 2.19
GGA2-204ENST00000563047 RNMTO43148 476 aaKnown RBP28.75■■■□□ 2.19
GGA2-204ENST00000563047 FKBP8Q14318 412 aa28.75■■■□□ 2.19
GGA2-204ENST00000563047 KCNA3P22001 575 aa28.74■■■□□ 2.19
GGA2-204ENST00000563047 DNAJC10Q8IXB1 793 aa28.74■■■□□ 2.19
GGA2-204ENST00000563047 VIRMAQ69YN4 1812 aaKnown RBP28.73■■■□□ 2.19
GGA2-204ENST00000563047 CC2D1BQ5T0F9 858 aaKnown RBP28.73■■■□□ 2.19
GGA2-204ENST00000563047 DDR1Q08345 913 aa28.72■■■□□ 2.19
GGA2-204ENST00000563047 SLC39A6Q13433 755 aa28.72■■■□□ 2.19
GGA2-204ENST00000563047 MTHFSDQ2M296 383 aaKnown RBP28.72■■■□□ 2.19
GGA2-204ENST00000563047 KIF3CO14782 793 aa28.71■■■□□ 2.19
GGA2-204ENST00000563047 DIAPH1O60610 1272 aaKnown RBP28.71■■■□□ 2.19
GGA2-204ENST00000563047 FCHSD2O94868 740 aa28.71■■■□□ 2.19
GGA2-204ENST00000563047 ARHGAP27Q6ZUM4 889 aa28.7■■■□□ 2.18
GGA2-204ENST00000563047 KCPQ6ZWJ8 1503 aa28.69■■■□□ 2.18
GGA2-204ENST00000563047 SOS1Q07889 1333 aaPredicted RBP28.69■■■□□ 2.18
GGA2-204ENST00000563047 CYP19A1P11511 503 aaPredicted RBP28.68■■■□□ 2.18
GGA2-204ENST00000563047 TM4SF1P30408 202 aa28.68■■■□□ 2.18
GGA2-204ENST00000563047 POLRMTO00411 1230 aaKnown RBP28.67■■■□□ 2.18
GGA2-204ENST00000563047 HSPA6P17066 643 aa28.67■■■□□ 2.18
GGA2-204ENST00000563047 USPL1Q5W0Q7 1092 aa28.67■■■□□ 2.18
GGA2-204ENST00000563047 ARFGEF1Q9Y6D6 1849 aa28.66■■■□□ 2.18
GGA2-204ENST00000563047 PIM2Q9P1W9 311 aa28.66■■■□□ 2.18
GGA2-204ENST00000563047 ZPR1O75312 459 aa28.65■■■□□ 2.18
GGA2-204ENST00000563047 COL3A1P02461 1466 aaPredicted RBP28.65■■■□□ 2.18
GGA2-204ENST00000563047 ZBTB1Q9Y2K1 713 aa28.63■■■□□ 2.17
GGA2-204ENST00000563047 NPC1L1Q9UHC9 1359 aa28.62■■■□□ 2.17
GGA2-204ENST00000563047 CHRNA5P30532 468 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms