RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 PKD1L3Q7Z443 1732 aa25.76■■□□□ 1.71
KATNB1-202ENST00000562542 MAP2P11137 1827 aaKnown RBP25.76■■□□□ 1.71
KATNB1-202ENST00000562542 WDR90Q96KV7 1748 aa25.75■■□□□ 1.71
KATNB1-202ENST00000562542 HTRA3P83110 453 aa25.75■■□□□ 1.71
KATNB1-202ENST00000562542 TMF1P82094 1093 aa25.74■■□□□ 1.71
KATNB1-202ENST00000562542 TRAPPC3LQ5T215 181 aa25.74■■□□□ 1.71
KATNB1-202ENST00000562542 COL13A1Q5TAT6 717 aaPredicted RBP25.74■■□□□ 1.71
KATNB1-202ENST00000562542 NLGN1Q8N2Q7 840 aa25.74■■□□□ 1.71
KATNB1-202ENST00000562542 KLRG1Q96E93 195 aa25.74■■□□□ 1.71
KATNB1-202ENST00000562542 CCDC87Q9NVE4 849 aa25.74■■□□□ 1.71
KATNB1-202ENST00000562542 RTCBQ9Y3I0 505 aaKnown RBP25.74■■□□□ 1.71
KATNB1-202ENST00000562542 C10orf71Q711Q0 1435 aa25.73■■□□□ 1.71
KATNB1-202ENST00000562542 PPM1GO15355 546 aaPredicted RBP25.73■■□□□ 1.71
KATNB1-202ENST00000562542 DPEP1P16444 411 aa25.73■■□□□ 1.71
KATNB1-202ENST00000562542 KIF13BQ9NQT8 1826 aa25.72■■□□□ 1.71
KATNB1-202ENST00000562542 KIAA1551Q9HCM1 1747 aa25.72■■□□□ 1.71
KATNB1-202ENST00000562542 C9orf131Q5VYM1 1079 aa25.72■■□□□ 1.71
KATNB1-202ENST00000562542 EMILIN1Q9Y6C2 1016 aa25.71■■□□□ 1.71
KATNB1-202ENST00000562542 KIF20BQ96Q89 1820 aa25.7■■□□□ 1.7
KATNB1-202ENST00000562542 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
KATNB1-202ENST00000562542 FSTL1Q12841 308 aa25.69■■□□□ 1.7
KATNB1-202ENST00000562542 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
KATNB1-202ENST00000562542 PARP3Q9Y6F1 533 aa25.69■■□□□ 1.7
KATNB1-202ENST00000562542 IFNL2Q8IZJ0 200 aa25.68■■□□□ 1.7
KATNB1-202ENST00000562542 KDM2BQ8NHM5 1336 aa25.67■■□□□ 1.7
KATNB1-202ENST00000562542 RFC4P35249 363 aa25.67■■□□□ 1.7
KATNB1-202ENST00000562542 TNS4Q8IZW8 715 aa25.67■■□□□ 1.7
KATNB1-202ENST00000562542 JMYQ8N9B5 988 aa25.67■■□□□ 1.7
KATNB1-202ENST00000562542 PHKG2P15735 406 aa25.66■■□□□ 1.7
KATNB1-202ENST00000562542 ARHGEF1Q92888 912 aaKnown RBP25.66■■□□□ 1.7
KATNB1-202ENST00000562542 RBM42Q9BTD8 480 aaKnown RBP25.66■■□□□ 1.7
KATNB1-202ENST00000562542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.66■■□□□ 1.7
KATNB1-202ENST00000562542 NCAPD2Q15021 1401 aa25.65■■□□□ 1.7
KATNB1-202ENST00000562542 ADRA2BP18089 450 aa25.65■■□□□ 1.7
KATNB1-202ENST00000562542 C4AP0C0L4 1744 aa25.65■■□□□ 1.7
KATNB1-202ENST00000562542 KCPQ6ZWJ8 1503 aa25.64■■□□□ 1.7
KATNB1-202ENST00000562542 RNF181Q9P0P0 153 aa25.64■■□□□ 1.7
KATNB1-202ENST00000562542 GYS1P13807 737 aa25.63■■□□□ 1.69
KATNB1-202ENST00000562542 EYA1Q99502 592 aa25.63■■□□□ 1.69
KATNB1-202ENST00000562542 PIM2Q9P1W9 311 aa25.63■■□□□ 1.69
KATNB1-202ENST00000562542 KDRP35968 1356 aa25.62■■□□□ 1.69
KATNB1-202ENST00000562542 RRAGCQ9HB90 399 aa25.62■■□□□ 1.69
KATNB1-202ENST00000562542 DALRD3Q5D0E6 543 aaKnown RBP25.61■■□□□ 1.69
KATNB1-202ENST00000562542 KCNA3P22001 575 aa25.6■■□□□ 1.69
KATNB1-202ENST00000562542 RC3H1Q5TC82 1133 aaKnown RBP25.6■■□□□ 1.69
KATNB1-202ENST00000562542 RPS6KA4O75676 772 aa25.59■■□□□ 1.69
KATNB1-202ENST00000562542 SLC4A9Q96Q91 983 aa25.59■■□□□ 1.69
KATNB1-202ENST00000562542 BRCA1P38398 1863 aaKnown RBP25.59■■□□□ 1.69
KATNB1-202ENST00000562542 WASHC2AQ641Q2 1341 aa25.59■■□□□ 1.69
KATNB1-202ENST00000562542 CNTNAP4Q9C0A0 1308 aa25.59■■□□□ 1.69
KATNB1-202ENST00000562542 PRELPP51888 382 aa25.58■■□□□ 1.69
KATNB1-202ENST00000562542 CDCA8Q53HL2 280 aa25.58■■□□□ 1.69
KATNB1-202ENST00000562542 SMC1BQ8NDV3 1235 aa25.58■■□□□ 1.69
KATNB1-202ENST00000562542 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
KATNB1-202ENST00000562542 ARFGEF1Q9Y6D6 1849 aa25.57■■□□□ 1.68
KATNB1-202ENST00000562542 CARD14Q9BXL6 1004 aa25.55■■□□□ 1.68
KATNB1-202ENST00000562542 ERVV-2B6SEH9 535 aa25.54■■□□□ 1.68
KATNB1-202ENST00000562542 TNRC6CQ9HCJ0 1690 aaKnown RBP25.54■■□□□ 1.68
KATNB1-202ENST00000562542 CHRNA5P30532 468 aa25.53■■□□□ 1.68
KATNB1-202ENST00000562542 COL5A3P25940 1745 aaPredicted RBP25.52■■□□□ 1.68
KATNB1-202ENST00000562542 ANKRD26Q9UPS8 1709 aa25.52■■□□□ 1.68
KATNB1-202ENST00000562542 HSP90AB1P08238 724 aaKnown RBP25.52■■□□□ 1.68
KATNB1-202ENST00000562542 SRP68Q9UHB9 627 aaKnown RBP25.52■■□□□ 1.68
KATNB1-202ENST00000562542 ZNF831Q5JPB2 1677 aa25.52■■□□□ 1.68
KATNB1-202ENST00000562542 CABP4P57796 275 aa25.51■■□□□ 1.67
KATNB1-202ENST00000562542 PTCD1O75127 700 aaKnown RBP25.5■■□□□ 1.67
KATNB1-202ENST00000562542 FKBP8Q14318 412 aa25.5■■□□□ 1.67
KATNB1-202ENST00000562542 PCNTO95613 3336 aa25.49■■□□□ 1.67
KATNB1-202ENST00000562542 HSPA1AP0DMV8 641 aaKnown RBP25.49■■□□□ 1.67
KATNB1-202ENST00000562542 HSPA1BP0DMV9 641 aaKnown RBP25.49■■□□□ 1.67
KATNB1-202ENST00000562542 DDR1Q08345 913 aa25.49■■□□□ 1.67
KATNB1-202ENST00000562542 USP42Q9H9J4 1324 aaKnown RBP25.48■■□□□ 1.67
KATNB1-202ENST00000562542 CRKLP46109 303 aaKnown RBP25.48■■□□□ 1.67
KATNB1-202ENST00000562542 EIF4A2Q14240 407 aaKnown RBP25.48■■□□□ 1.67
KATNB1-202ENST00000562542 POLKQ9UBT6 870 aa25.48■■□□□ 1.67
KATNB1-202ENST00000562542 RASSF7Q02833 373 aa25.47■■□□□ 1.67
KATNB1-202ENST00000562542 TNNT2P45379 298 aaPredicted RBP25.46■■□□□ 1.67
KATNB1-202ENST00000562542 PLEKHO1Q53GL0 409 aaPredicted RBP25.46■■□□□ 1.67
KATNB1-202ENST00000562542 ZNF530Q6P9A1 599 aaPredicted RBP25.45■■□□□ 1.66
KATNB1-202ENST00000562542 ZC3H4Q9UPT8 1303 aaKnown RBP25.44■■□□□ 1.66
KATNB1-202ENST00000562542 MYH14Q7Z406 1995 aaKnown RBP25.44■■□□□ 1.66
KATNB1-202ENST00000562542 VEGFAP15692 232 aaPredicted RBP25.44■■□□□ 1.66
KATNB1-202ENST00000562542 KDM6AO15550 1401 aaPredicted RBP25.43■■□□□ 1.66
KATNB1-202ENST00000562542 SBF1O95248 1867 aa25.43■■□□□ 1.66
KATNB1-202ENST00000562542 POLRMTO00411 1230 aaKnown RBP25.42■■□□□ 1.66
KATNB1-202ENST00000562542 LMNB1P20700 586 aa25.42■■□□□ 1.66
KATNB1-202ENST00000562542 MTHFSP49914 203 aa25.42■■□□□ 1.66
KATNB1-202ENST00000562542 GLTPD2A6NH11 291 aa25.41■■□□□ 1.66
KATNB1-202ENST00000562542 ZPR1O75312 459 aa25.41■■□□□ 1.66
KATNB1-202ENST00000562542 C1orf141Q5JVX7 400 aa25.41■■□□□ 1.66
KATNB1-202ENST00000562542 AMOTQ4VCS5 1084 aa25.39■■□□□ 1.66
KATNB1-202ENST00000562542 NFATC2IPQ8NCF5 419 aa25.39■■□□□ 1.66
KATNB1-202ENST00000562542 TM4SF1P30408 202 aa25.38■■□□□ 1.65
KATNB1-202ENST00000562542 USPL1Q5W0Q7 1092 aa25.38■■□□□ 1.65
KATNB1-202ENST00000562542 INTS5Q6P9B9 1019 aaKnown RBP25.35■■□□□ 1.65
KATNB1-202ENST00000562542 POLR3GLQ9BT43 218 aa25.34■■□□□ 1.65
KATNB1-202ENST00000562542 TJP1Q07157 1748 aa25.34■■□□□ 1.65
KATNB1-202ENST00000562542 TTLL6Q8N841 843 aa25.33■■□□□ 1.65
KATNB1-202ENST00000562542 NFIXQ14938 502 aa25.32■■□□□ 1.64
KATNB1-202ENST00000562542 TIAM2Q8IVF5 1701 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms