RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
DENND4A-205ENST00000562540 ZNF592Q92610 1267 aa7.91□□□□□ -1.14
DENND4A-205ENST00000562540 PCDHB11Q9Y5F2 797 aa7.91□□□□□ -1.14
DENND4A-205ENST00000562540 CHRNA4P43681 627 aa7.9□□□□□ -1.14
DENND4A-205ENST00000562540 SCTRP47872 440 aa7.9□□□□□ -1.14
DENND4A-205ENST00000562540 NR1H3Q13133 447 aa7.9□□□□□ -1.14
DENND4A-205ENST00000562540 CLN3Q13286 438 aa7.9□□□□□ -1.14
DENND4A-205ENST00000562540 EDARADDQ8WWZ3 215 aa7.9□□□□□ -1.14
DENND4A-205ENST00000562540 ESF1Q9H501 851 aaKnown RBP7.9□□□□□ -1.14
DENND4A-205ENST00000562540 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
DENND4A-205ENST00000562540 MCCD1P59942 119 aaPredicted RBP7.89□□□□□ -1.15
DENND4A-205ENST00000562540 CFHR5Q9BXR6 569 aa7.89□□□□□ -1.15
DENND4A-205ENST00000562540 GRIP2Q9C0E4 1043 aa7.89□□□□□ -1.15
DENND4A-205ENST00000562540 SEMA6BQ9H3T3 888 aa7.89□□□□□ -1.15
DENND4A-205ENST00000562540 ZNF330Q9Y3S2 320 aaPredicted RBP7.89□□□□□ -1.15
DENND4A-205ENST00000562540 F11P03951 625 aa7.88□□□□□ -1.15
DENND4A-205ENST00000562540 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
DENND4A-205ENST00000562540 SPATA31C2B4DYI2 1134 aa7.87□□□□□ -1.15
DENND4A-205ENST00000562540 WASLO00401 505 aaPredicted RBP7.87□□□□□ -1.15
DENND4A-205ENST00000562540 NEUROD2Q15784 382 aa7.87□□□□□ -1.15
DENND4A-205ENST00000562540 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
DENND4A-205ENST00000562540 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
DENND4A-205ENST00000562540 IL27Q8NEV9 243 aa7.87□□□□□ -1.15
DENND4A-205ENST00000562540 OSBPL3Q9H4L5 887 aa7.87□□□□□ -1.15
DENND4A-205ENST00000562540 GDF2Q9UK05 429 aaPredicted RBP7.87□□□□□ -1.15
DENND4A-205ENST00000562540 DOC2BQ14184 412 aa7.86□□□□□ -1.15
DENND4A-205ENST00000562540 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
DENND4A-205ENST00000562540 RAB6BQ9NRW1 208 aa7.86□□□□□ -1.15
DENND4A-205ENST00000562540 TRAK2O60296 914 aa7.85□□□□□ -1.15
DENND4A-205ENST00000562540 AMPD1P23109 780 aa7.85□□□□□ -1.15
DENND4A-205ENST00000562540 GOLGA6L1Q8N7Z2 621 aa7.85□□□□□ -1.15
DENND4A-205ENST00000562540 NDUFB9Q9Y6M9 179 aa7.85□□□□□ -1.15
DENND4A-205ENST00000562540 GNB5O14775 395 aa7.84□□□□□ -1.15
DENND4A-205ENST00000562540 UBAP2LQ14157 1087 aaKnown RBP7.84□□□□□ -1.15
DENND4A-205ENST00000562540 GPAMQ9HCL2 828 aa7.84□□□□□ -1.15
DENND4A-205ENST00000562540 C2CD2LO14523 706 aa7.83□□□□□ -1.16
DENND4A-205ENST00000562540 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
DENND4A-205ENST00000562540 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
DENND4A-205ENST00000562540 APBB1O00213 710 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 GPR37L1O60883 481 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 MYCP01106 439 aaPredicted RBP7.82□□□□□ -1.16
DENND4A-205ENST00000562540 GNRH1P01148 92 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 SLCO4C1Q6ZQN7 724 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 BANK1Q8NDB2 785 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 CNKSR1Q969H4 720 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 GGA1Q9UJY5 639 aa7.82□□□□□ -1.16
DENND4A-205ENST00000562540 SOCS7O14512 581 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 IL2RAP01589 272 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 GTF2E1P29083 439 aaPredicted RBP7.81□□□□□ -1.16
DENND4A-205ENST00000562540 PHKA2P46019 1235 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 DGKGP49619 791 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 BTBD6Q96KE9 485 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 ESYT1Q9BSJ8 1104 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 PHF24Q9UPV7 400 aa7.81□□□□□ -1.16
DENND4A-205ENST00000562540 A0A1B0GTH6 734 aa7.8□□□□□ -1.16
DENND4A-205ENST00000562540 BMP4P12644 408 aa7.8□□□□□ -1.16
DENND4A-205ENST00000562540 CENPCQ03188 943 aa7.8□□□□□ -1.16
DENND4A-205ENST00000562540 ZSCAN10Q96SZ4 725 aaPredicted RBP7.8□□□□□ -1.16
DENND4A-205ENST00000562540 KRTAP9-9Q9BYP9 154 aa7.8□□□□□ -1.16
DENND4A-205ENST00000562540 KRTAP9-4Q9BYQ2 154 aa7.8□□□□□ -1.16
DENND4A-205ENST00000562540 GNASQ5JWF2 1037 aa7.79□□□□□ -1.16
DENND4A-205ENST00000562540 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
DENND4A-205ENST00000562540 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 PIK3R2O00459 728 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 EPXP11678 715 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 CTBSQ01459 385 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 TMEM214Q6NUQ4 689 aaKnown RBP7.78□□□□□ -1.16
DENND4A-205ENST00000562540 ABHD17AQ96GS6 310 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
DENND4A-205ENST00000562540 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 CEP126Q9P2H0 1117 aa7.78□□□□□ -1.16
DENND4A-205ENST00000562540 ATXN7L1Q9ULK2 861 aaPredicted RBP7.78□□□□□ -1.16
DENND4A-205ENST00000562540 CSB-PGBD3P0DP91 1061 aa7.77□□□□□ -1.17
DENND4A-205ENST00000562540 PGBD3Q8N328 593 aa7.77□□□□□ -1.17
DENND4A-205ENST00000562540 SNRKQ9NRH2 765 aa7.77□□□□□ -1.17
DENND4A-205ENST00000562540 NOP53Q9NZM5 478 aaKnown RBP7.77□□□□□ -1.17
DENND4A-205ENST00000562540 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
DENND4A-205ENST00000562540 ESCO1Q5FWF5 840 aa7.76□□□□□ -1.17
DENND4A-205ENST00000562540 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
DENND4A-205ENST00000562540 XAGE2Q96GT9 111 aa7.76□□□□□ -1.17
DENND4A-205ENST00000562540 FHDC1Q9C0D6 1143 aaPredicted RBP7.76□□□□□ -1.17
DENND4A-205ENST00000562540 NDFIP2Q9NV92 336 aa7.76□□□□□ -1.17
DENND4A-205ENST00000562540 HRH3Q9Y5N1 445 aa7.76□□□□□ -1.17
DENND4A-205ENST00000562540 BNIP3LO60238 219 aa7.75□□□□□ -1.17
DENND4A-205ENST00000562540 FGFR3P22607 806 aa7.75□□□□□ -1.17
DENND4A-205ENST00000562540 LBRQ14739 615 aaKnown RBP7.75□□□□□ -1.17
DENND4A-205ENST00000562540 C4orf17Q53FE4 359 aa7.75□□□□□ -1.17
DENND4A-205ENST00000562540 EFHC2Q5JST6 749 aa7.75□□□□□ -1.17
DENND4A-205ENST00000562540 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
DENND4A-205ENST00000562540 MSX1P28360 303 aa7.74□□□□□ -1.17
DENND4A-205ENST00000562540 GATA4P43694 442 aa7.74□□□□□ -1.17
DENND4A-205ENST00000562540 BRPF1P55201 1214 aaPredicted RBP7.74□□□□□ -1.17
DENND4A-205ENST00000562540 NEURL1BA8MQ27 555 aa7.73□□□□□ -1.17
DENND4A-205ENST00000562540 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
DENND4A-205ENST00000562540 TLR1Q15399 786 aa7.73□□□□□ -1.17
DENND4A-205ENST00000562540 NKAPLQ5M9Q1 402 aa7.73□□□□□ -1.17
DENND4A-205ENST00000562540 CHSY3Q70JA7 882 aa7.73□□□□□ -1.17
DENND4A-205ENST00000562540 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
DENND4A-205ENST00000562540 RHBDD1Q8TEB9 315 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms