RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
NIP7-203ENST00000562131 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
NIP7-203ENST00000562131 CABP4P57796 275 aa12.93□□□□□ -0.34
NIP7-203ENST00000562131 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
NIP7-203ENST00000562131 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
NIP7-203ENST00000562131 ITPK1Q13572 414 aa12.92□□□□□ -0.34
NIP7-203ENST00000562131 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
NIP7-203ENST00000562131 MIER1Q8N108 512 aa12.92□□□□□ -0.34
NIP7-203ENST00000562131 C5P01031 1676 aa12.92□□□□□ -0.34
NIP7-203ENST00000562131 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
NIP7-203ENST00000562131 GOLGB1Q14789 3259 aaKnown RBP12.91□□□□□ -0.34
NIP7-203ENST00000562131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
NIP7-203ENST00000562131 HMOX1P09601 288 aa12.91□□□□□ -0.34
NIP7-203ENST00000562131 GPR162Q16538 588 aa12.91□□□□□ -0.34
NIP7-203ENST00000562131 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
NIP7-203ENST00000562131 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
NIP7-203ENST00000562131 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
NIP7-203ENST00000562131 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
NIP7-203ENST00000562131 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
NIP7-203ENST00000562131 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
NIP7-203ENST00000562131 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
NIP7-203ENST00000562131 GNPATO15228 680 aa12.89□□□□□ -0.35
NIP7-203ENST00000562131 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
NIP7-203ENST00000562131 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
NIP7-203ENST00000562131 KDRP35968 1356 aa12.89□□□□□ -0.35
NIP7-203ENST00000562131 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
NIP7-203ENST00000562131 SSFA2P28290 1259 aa12.88□□□□□ -0.35
NIP7-203ENST00000562131 AKAP4Q5JQC9 854 aa12.88□□□□□ -0.35
NIP7-203ENST00000562131 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
NIP7-203ENST00000562131 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
NIP7-203ENST00000562131 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
NIP7-203ENST00000562131 NPC1L1Q9UHC9 1359 aa12.86□□□□□ -0.35
NIP7-203ENST00000562131 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
NIP7-203ENST00000562131 MTHFSDQ2M296 383 aaKnown RBP12.86□□□□□ -0.35
NIP7-203ENST00000562131 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
NIP7-203ENST00000562131 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
NIP7-203ENST00000562131 RALBP1Q15311 655 aa12.85□□□□□ -0.35
NIP7-203ENST00000562131 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
NIP7-203ENST00000562131 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
NIP7-203ENST00000562131 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
NIP7-203ENST00000562131 CD2APQ9Y5K6 639 aa12.84□□□□□ -0.35
NIP7-203ENST00000562131 UBR3Q6ZT12 1888 aa12.83□□□□□ -0.36
NIP7-203ENST00000562131 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
NIP7-203ENST00000562131 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
NIP7-203ENST00000562131 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
NIP7-203ENST00000562131 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
NIP7-203ENST00000562131 RFC4P35249 363 aa12.82□□□□□ -0.36
NIP7-203ENST00000562131 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
NIP7-203ENST00000562131 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
NIP7-203ENST00000562131 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
NIP7-203ENST00000562131 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
NIP7-203ENST00000562131 MMP10P09238 476 aa12.81□□□□□ -0.36
NIP7-203ENST00000562131 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
NIP7-203ENST00000562131 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
NIP7-203ENST00000562131 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
NIP7-203ENST00000562131 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
NIP7-203ENST00000562131 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
NIP7-203ENST00000562131 ADRA2BP18089 450 aa12.8□□□□□ -0.36
NIP7-203ENST00000562131 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
NIP7-203ENST00000562131 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
NIP7-203ENST00000562131 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
NIP7-203ENST00000562131 GYS1P13807 737 aa12.79□□□□□ -0.36
NIP7-203ENST00000562131 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
NIP7-203ENST00000562131 NUDCQ9Y266 331 aa12.79□□□□□ -0.36
NIP7-203ENST00000562131 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
NIP7-203ENST00000562131 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
NIP7-203ENST00000562131 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
NIP7-203ENST00000562131 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
NIP7-203ENST00000562131 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.36
NIP7-203ENST00000562131 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
NIP7-203ENST00000562131 PRKAR2BP31323 418 aa12.77□□□□□ -0.37
NIP7-203ENST00000562131 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
NIP7-203ENST00000562131 TEFQ10587 303 aa12.77□□□□□ -0.37
NIP7-203ENST00000562131 IL17REQ8NFR9 667 aa12.77□□□□□ -0.37
NIP7-203ENST00000562131 MRS2Q9HD23 443 aa12.77□□□□□ -0.37
NIP7-203ENST00000562131 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
NIP7-203ENST00000562131 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
NIP7-203ENST00000562131 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
NIP7-203ENST00000562131 TTC5Q8N0Z6 440 aa12.76□□□□□ -0.37
NIP7-203ENST00000562131 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
NIP7-203ENST00000562131 CCDC87Q9NVE4 849 aa12.76□□□□□ -0.37
NIP7-203ENST00000562131 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
NIP7-203ENST00000562131 FKBP8Q14318 412 aa12.75□□□□□ -0.37
NIP7-203ENST00000562131 CHD4Q14839 1912 aa12.75□□□□□ -0.37
NIP7-203ENST00000562131 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
NIP7-203ENST00000562131 MRC1P22897 1456 aa12.74□□□□□ -0.37
NIP7-203ENST00000562131 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
NIP7-203ENST00000562131 A0A0G2JLW4 131 aa12.74□□□□□ -0.37
NIP7-203ENST00000562131 ZPR1O75312 459 aa12.74□□□□□ -0.37
NIP7-203ENST00000562131 TJP1Q07157 1748 aa12.74□□□□□ -0.37
NIP7-203ENST00000562131 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
NIP7-203ENST00000562131 TGFB2P61812 414 aa12.73□□□□□ -0.37
NIP7-203ENST00000562131 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
NIP7-203ENST00000562131 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
NIP7-203ENST00000562131 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
NIP7-203ENST00000562131 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
NIP7-203ENST00000562131 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
NIP7-203ENST00000562131 SOS1Q07889 1333 aaPredicted RBP12.72□□□□□ -0.37
NIP7-203ENST00000562131 FCHSD2O94868 740 aa12.72□□□□□ -0.37
NIP7-203ENST00000562131 STARD3NLO95772 234 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms