RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 TGFB2P61812 414 aa28.07■■■□□ 2.08
PDXDC1-207ENST00000562119 NMRK2Q9NPI5 230 aa28.07■■■□□ 2.08
PDXDC1-207ENST00000562119 ATG3Q9NT62 314 aa28.07■■■□□ 2.08
PDXDC1-207ENST00000562119 CARD14Q9BXL6 1004 aa28.06■■■□□ 2.08
PDXDC1-207ENST00000562119 C10orf71Q711Q0 1435 aa28.05■■■□□ 2.08
PDXDC1-207ENST00000562119 N4BP2Q86UW6 1770 aaPredicted RBP28.05■■■□□ 2.08
PDXDC1-207ENST00000562119 EYA1Q99502 592 aa28.05■■■□□ 2.08
PDXDC1-207ENST00000562119 PPM1GO15355 546 aaPredicted RBP28.04■■■□□ 2.08
PDXDC1-207ENST00000562119 PHKG2P15735 406 aa28.04■■■□□ 2.08
PDXDC1-207ENST00000562119 ARHGAP27Q6ZUM4 889 aa28.04■■■□□ 2.08
PDXDC1-207ENST00000562119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.04■■■□□ 2.081e-7■■■□□ 14.6
PDXDC1-207ENST00000562119 KDRP35968 1356 aa28.02■■■□□ 2.08
PDXDC1-207ENST00000562119 DPEP1P16444 411 aa28.02■■■□□ 2.08
PDXDC1-207ENST00000562119 TRAPPC3LQ5T215 181 aa28.02■■■□□ 2.08
PDXDC1-207ENST00000562119 SLC4A9Q96Q91 983 aa28.02■■■□□ 2.08
PDXDC1-207ENST00000562119 WASHC2AQ641Q2 1341 aa28.01■■■□□ 2.07
PDXDC1-207ENST00000562119 IFNL2Q8IZJ0 200 aa28.01■■■□□ 2.07
PDXDC1-207ENST00000562119 NLGN1Q8N2Q7 840 aa28.01■■■□□ 2.07
PDXDC1-207ENST00000562119 RTCBQ9Y3I0 505 aaKnown RBP28.01■■■□□ 2.07
PDXDC1-207ENST00000562119 ARHGEF1Q92888 912 aaKnown RBP27.99■■■□□ 2.07
PDXDC1-207ENST00000562119 ANKRD26Q9UPS8 1709 aa27.98■■■□□ 2.07
PDXDC1-207ENST00000562119 FCHSD2O94868 740 aa27.98■■■□□ 2.07
PDXDC1-207ENST00000562119 GYS1P13807 737 aa27.97■■■□□ 2.07
PDXDC1-207ENST00000562119 KCNA3P22001 575 aa27.97■■■□□ 2.07
PDXDC1-207ENST00000562119 HTRA3P83110 453 aa27.97■■■□□ 2.07
PDXDC1-207ENST00000562119 CCDC87Q9NVE4 849 aa27.97■■■□□ 2.07
PDXDC1-207ENST00000562119 C9orf131Q5VYM1 1079 aa27.96■■■□□ 2.07
PDXDC1-207ENST00000562119 RBM46Q8TBY0 533 aaKnown RBP27.96■■■□□ 2.07
PDXDC1-207ENST00000562119 C4AP0C0L4 1744 aa27.95■■■□□ 2.06
PDXDC1-207ENST00000562119 WDR90Q96KV7 1748 aa27.95■■■□□ 2.06
PDXDC1-207ENST00000562119 ADRA2BP18089 450 aa27.94■■■□□ 2.06
PDXDC1-207ENST00000562119 RC3H1Q5TC82 1133 aaKnown RBP27.94■■■□□ 2.06
PDXDC1-207ENST00000562119 PCNTO95613 3336 aa27.93■■■□□ 2.06
PDXDC1-207ENST00000562119 CDCA8Q53HL2 280 aa27.93■■■□□ 2.06
PDXDC1-207ENST00000562119 RBM42Q9BTD8 480 aaKnown RBP27.93■■■□□ 2.06
PDXDC1-207ENST00000562119 POLKQ9UBT6 870 aa27.93■■■□□ 2.06
PDXDC1-207ENST00000562119 BRCA1P38398 1863 aaKnown RBP27.92■■■□□ 2.06
PDXDC1-207ENST00000562119 KLRG1Q96E93 195 aa27.92■■■□□ 2.06
PDXDC1-207ENST00000562119 PARP3Q9Y6F1 533 aa27.92■■■□□ 2.06
PDXDC1-207ENST00000562119 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
PDXDC1-207ENST00000562119 RPS6KA4O75676 772 aa27.91■■■□□ 2.06
PDXDC1-207ENST00000562119 RFC4P35249 363 aa27.91■■■□□ 2.06
PDXDC1-207ENST00000562119 COL13A1Q5TAT6 717 aaPredicted RBP27.91■■■□□ 2.06
PDXDC1-207ENST00000562119 ZNF831Q5JPB2 1677 aa27.91■■■□□ 2.06
PDXDC1-207ENST00000562119 PLEKHG2Q9H7P9 1386 aa27.89■■■□□ 2.06
PDXDC1-207ENST00000562119 ERVV-2B6SEH9 535 aa27.89■■■□□ 2.06
PDXDC1-207ENST00000562119 EIF4A2Q14240 407 aaKnown RBP27.89■■■□□ 2.06
PDXDC1-207ENST00000562119 C16orf71Q8IYS4 520 aaPredicted RBP27.89■■■□□ 2.06
PDXDC1-207ENST00000562119 JMYQ8N9B5 988 aa27.89■■■□□ 2.06
PDXDC1-207ENST00000562119 COL5A3P25940 1745 aaPredicted RBP27.89■■■□□ 2.05
PDXDC1-207ENST00000562119 KCPQ6ZWJ8 1503 aa27.88■■■□□ 2.05
PDXDC1-207ENST00000562119 DCAF5Q96JK2 942 aa27.88■■■□□ 2.05
PDXDC1-207ENST00000562119 FSTL1Q12841 308 aa27.87■■■□□ 2.05
PDXDC1-207ENST00000562119 PIM2Q9P1W9 311 aa27.87■■■□□ 2.05
PDXDC1-207ENST00000562119 ARFGEF1Q9Y6D6 1849 aa27.85■■■□□ 2.05
PDXDC1-207ENST00000562119 DALRD3Q5D0E6 543 aaKnown RBP27.84■■■□□ 2.05
PDXDC1-207ENST00000562119 RNF181Q9P0P0 153 aa27.84■■■□□ 2.05
PDXDC1-207ENST00000562119 SRP68Q9UHB9 627 aaKnown RBP27.84■■■□□ 2.05
PDXDC1-207ENST00000562119 KDM2BQ8NHM5 1336 aa27.84■■■□□ 2.05
PDXDC1-207ENST00000562119 MYH14Q7Z406 1995 aaKnown RBP27.84■■■□□ 2.05
PDXDC1-207ENST00000562119 KDM6AO15550 1401 aaPredicted RBP27.84■■■□□ 2.05
PDXDC1-207ENST00000562119 DDR1Q08345 913 aa27.83■■■□□ 2.05
PDXDC1-207ENST00000562119 FKBP8Q14318 412 aa27.83■■■□□ 2.05
PDXDC1-207ENST00000562119 RRAGCQ9HB90 399 aa27.83■■■□□ 2.05
PDXDC1-207ENST00000562119 HSP90AB1P08238 724 aaKnown RBP27.81■■■□□ 2.04
PDXDC1-207ENST00000562119 CHRNA5P30532 468 aa27.81■■■□□ 2.04
PDXDC1-207ENST00000562119 PTCD1O75127 700 aaKnown RBP27.8■■■□□ 2.04
PDXDC1-207ENST00000562119 TNNT2P45379 298 aaPredicted RBP27.8■■■□□ 2.04
PDXDC1-207ENST00000562119 CRKLP46109 303 aaKnown RBP27.8■■■□□ 2.04
PDXDC1-207ENST00000562119 CABP4P57796 275 aa27.8■■■□□ 2.04
PDXDC1-207ENST00000562119 USP42Q9H9J4 1324 aaKnown RBP27.79■■■□□ 2.04
PDXDC1-207ENST00000562119 CAPN15O75808 1086 aa27.78■■■□□ 2.04
PDXDC1-207ENST00000562119 PLEKHO1Q53GL0 409 aaPredicted RBP27.77■■■□□ 2.04
PDXDC1-207ENST00000562119 ZNF530Q6P9A1 599 aaPredicted RBP27.77■■■□□ 2.04
PDXDC1-207ENST00000562119 POLRMTO00411 1230 aaKnown RBP27.74■■■□□ 2.03
PDXDC1-207ENST00000562119 SMC1BQ8NDV3 1235 aa27.74■■■□□ 2.03
PDXDC1-207ENST00000562119 TNRC6CQ9HCJ0 1690 aaKnown RBP27.73■■■□□ 2.03
PDXDC1-207ENST00000562119 TM4SF1P30408 202 aa27.73■■■□□ 2.03
PDXDC1-207ENST00000562119 MTHFSP49914 203 aa27.73■■■□□ 2.03
PDXDC1-207ENST00000562119 TNS4Q8IZW8 715 aa27.73■■■□□ 2.03
PDXDC1-207ENST00000562119 NFATC2IPQ8NCF5 419 aa27.73■■■□□ 2.03
PDXDC1-207ENST00000562119 AMOTQ4VCS5 1084 aa27.72■■■□□ 2.03
PDXDC1-207ENST00000562119 INTS5Q6P9B9 1019 aaKnown RBP27.72■■■□□ 2.03
PDXDC1-207ENST00000562119 SBF1O95248 1867 aa27.71■■■□□ 2.03
PDXDC1-207ENST00000562119 RASSF7Q02833 373 aa27.71■■■□□ 2.03
PDXDC1-207ENST00000562119 TJP1Q07157 1748 aa27.7■■■□□ 2.03
PDXDC1-207ENST00000562119 AEBP1Q8IUX7 1158 aa27.7■■■□□ 2.02
PDXDC1-207ENST00000562119 ADAMTS7Q9UKP4 1686 aa27.7■■■□□ 2.02
PDXDC1-207ENST00000562119 PRELPP51888 382 aa27.69■■■□□ 2.02
PDXDC1-207ENST00000562119 ZC3H4Q9UPT8 1303 aaKnown RBP27.67■■■□□ 2.02
PDXDC1-207ENST00000562119 C1orf141Q5JVX7 400 aa27.66■■■□□ 2.02
PDXDC1-207ENST00000562119 USPL1Q5W0Q7 1092 aa27.66■■■□□ 2.02
PDXDC1-207ENST00000562119 GLTPD2A6NH11 291 aa27.63■■■□□ 2.01
PDXDC1-207ENST00000562119 ZPR1O75312 459 aa27.63■■■□□ 2.01
PDXDC1-207ENST00000562119 LMNB1P20700 586 aa27.63■■■□□ 2.01
PDXDC1-207ENST00000562119 DNAJC10Q8IXB1 793 aa27.63■■■□□ 2.01
PDXDC1-207ENST00000562119 SOS1Q07889 1333 aaPredicted RBP27.63■■■□□ 2.01
PDXDC1-207ENST00000562119 HSPA1AP0DMV8 641 aaKnown RBP27.62■■■□□ 2.01
PDXDC1-207ENST00000562119 HSPA1BP0DMV9 641 aaKnown RBP27.62■■■□□ 2.01
PDXDC1-207ENST00000562119 VEGFAP15692 232 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms