RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 NLRP3Q96P20 1036 aa5.13□□□□□ -1.59
CHD9-204ENST00000561869 ESF1Q9H501 851 aaKnown RBP5.13□□□□□ -1.59
CHD9-204ENST00000561869 USP17L5A8MUK1 530 aa5.12□□□□□ -1.59
CHD9-204ENST00000561869 TMEM229AB2RXF0 380 aa5.12□□□□□ -1.59
CHD9-204ENST00000561869 LZTS3O60299 673 aaPredicted RBP5.12□□□□□ -1.59
CHD9-204ENST00000561869 ADAMTS2O95450 1211 aa5.12□□□□□ -1.59
CHD9-204ENST00000561869 LYPD4Q6UWN0 246 aa5.12□□□□□ -1.59
CHD9-204ENST00000561869 PLEKHM2Q8IWE5 1019 aa5.12□□□□□ -1.59
CHD9-204ENST00000561869 GLMNQ92990 594 aa5.12□□□□□ -1.59
CHD9-204ENST00000561869 WASLO00401 505 aaPredicted RBP5.11□□□□□ -1.59
CHD9-204ENST00000561869 ATP9BO43861 1147 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 INHAP05111 366 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 IRS1P35568 1242 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 NCOA4Q13772 614 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 ESCO1Q5FWF5 840 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 WDR44Q5JSH3 913 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 SLC27A3Q5K4L6 730 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 NBPF10Q6P3W6 841 aaKnown RBP5.11□□□□□ -1.59
CHD9-204ENST00000561869 DEPDC4Q8N2C3 294 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 NBPF15Q8N660 670 aa5.11□□□□□ -1.59
CHD9-204ENST00000561869 ZBTB7BO15156 539 aaPredicted RBP5.1□□□□□ -1.59
CHD9-204ENST00000561869 GDF10P55107 478 aa5.1□□□□□ -1.59
CHD9-204ENST00000561869 EML3Q32P44 896 aa5.1□□□□□ -1.59
CHD9-204ENST00000561869 ZNF837Q96EG3 531 aaPredicted RBP5.1□□□□□ -1.59
CHD9-204ENST00000561869 NOD1Q9Y239 953 aa5.1□□□□□ -1.59
CHD9-204ENST00000561869 USP17L3A6NCW0 530 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 USP17L4A6NCW7 530 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 GPR25O00155 361 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 GTF2IP78347 998 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 USP17L2Q6R6M4 530 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 TAS1R3Q7RTX0 852 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 USP17L1Q7RTZ2 530 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 PPARGC1BQ86YN6 1023 aaKnown RBP5.09□□□□□ -1.59
CHD9-204ENST00000561869 ZNF295-AS1Q8N0V1 137 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 SLC4A9Q96Q91 983 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 ZSCAN10Q96SZ4 725 aaPredicted RBP5.09□□□□□ -1.59
CHD9-204ENST00000561869 TFIP11Q9UBB9 837 aaKnown RBP5.09□□□□□ -1.59
CHD9-204ENST00000561869 DYRK1BQ9Y463 629 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 USP3Q9Y6I4 520 aa5.09□□□□□ -1.59
CHD9-204ENST00000561869 RNF225M0QZC1 329 aaPredicted RBP5.08□□□□□ -1.6
CHD9-204ENST00000561869 CELA2BP08218 269 aaPredicted RBP5.08□□□□□ -1.6
CHD9-204ENST00000561869 SMTNP53814 917 aa5.08□□□□□ -1.6
CHD9-204ENST00000561869 SRSF11Q05519 484 aaKnown RBP5.08□□□□□ -1.6
CHD9-204ENST00000561869 MTFR1Q15390 333 aa5.08□□□□□ -1.6
CHD9-204ENST00000561869 TLR1Q15399 786 aa5.08□□□□□ -1.6
CHD9-204ENST00000561869 DBN1Q16643 649 aa5.08□□□□□ -1.6
CHD9-204ENST00000561869 C4orf17Q53FE4 359 aa5.08□□□□□ -1.6
CHD9-204ENST00000561869 IQSEC3Q9UPP2 1182 aaPredicted RBP5.08□□□□□ -1.6
CHD9-204ENST00000561869 KIAA1024Q9UPX6 916 aa5.08□□□□□ -1.6
CHD9-204ENST00000561869 PALM3A6NDB9 673 aaPredicted RBP5.07□□□□□ -1.6
CHD9-204ENST00000561869 DKK1O94907 266 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 THBS1P07996 1170 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 PHKA2P46019 1235 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 CLDN10P78369 228 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 GPAT2Q6NUI2 795 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 TRIM22Q8IYM9 498 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHD9-204ENST00000561869 RHBDD1Q8TEB9 315 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 CALR3Q96L12 384 aaKnown RBP5.07□□□□□ -1.6
CHD9-204ENST00000561869 PPP1R12CQ9BZL4 782 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 TIMMDC1Q9NPL8 285 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 ZNF358Q9NW07 568 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 MKRN1Q9UHC7 482 aaKnown RBP5.07□□□□□ -1.6
CHD9-204ENST00000561869 SERTAD1Q9UHV2 236 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 ZNF777Q9ULD5 760 aaPredicted RBP5.07□□□□□ -1.6
CHD9-204ENST00000561869 MAFBQ9Y5Q3 323 aaPredicted RBP5.07□□□□□ -1.6
CHD9-204ENST00000561869 GTF3C3Q9Y5Q9 886 aa5.07□□□□□ -1.6
CHD9-204ENST00000561869 DNMT3AQ9Y6K1 912 aaPredicted RBP5.07□□□□□ -1.6
CHD9-204ENST00000561869 A6NJY4 79 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 F11P03951 625 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 EPHA4P54764 986 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 MARSP56192 900 aaKnown RBP5.06□□□□□ -1.6
CHD9-204ENST00000561869 FOXK2Q01167 660 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 TMEM214Q6NUQ4 689 aaKnown RBP5.06□□□□□ -1.6
CHD9-204ENST00000561869 RIPOR1Q6ZS17 1223 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 TRIM50Q86XT4 487 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 GTPBP3Q969Y2 492 aaKnown RBP5.06□□□□□ -1.6
CHD9-204ENST00000561869 GAS2L1Q99501 681 aaPredicted RBP5.06□□□□□ -1.6
CHD9-204ENST00000561869 ZMYND15Q9H091 742 aa5.06□□□□□ -1.6
CHD9-204ENST00000561869 IGF1RP08069 1367 aa5.05□□□□□ -1.6
CHD9-204ENST00000561869 CDK2AP1O14519 115 aa5.05□□□□□ -1.6
CHD9-204ENST00000561869 UBAP2LQ14157 1087 aaKnown RBP5.05□□□□□ -1.6
CHD9-204ENST00000561869 GNASQ5JWF2 1037 aa5.05□□□□□ -1.6
CHD9-204ENST00000561869 KANK4Q5T7N3 995 aaPredicted RBP5.05□□□□□ -1.6
CHD9-204ENST00000561869 OGFOD1Q8N543 542 aa5.05□□□□□ -1.6
CHD9-204ENST00000561869 GMCL1Q96IK5 515 aa5.05□□□□□ -1.6
CHD9-204ENST00000561869 MBIPQ9NS73 344 aa5.05□□□□□ -1.6
CHD9-204ENST00000561869 A0A1B0GTH6 734 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 BACH1O14867 736 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 ITGB2P05107 769 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 MSX1P28360 303 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 CFAP70Q5T0N1 1121 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 CCDC102BQ68D86 513 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 KANK3Q6NY19 840 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 SIX5Q8N196 739 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 LARGE2Q8N3Y3 721 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 TPCN2Q8NHX9 752 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 ACDQ96AP0 544 aa5.04□□□□□ -1.6
CHD9-204ENST00000561869 SCARF2Q96GP6 870 aaPredicted RBP5.04□□□□□ -1.6
CHD9-204ENST00000561869 DNAAF2Q9NVR5 837 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms