RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 IPO8O15397 1037 aaKnown RBP34.26■■■■□ 3.07
AP4E1-207ENST00000561441 EIF4A1P60842 406 aaKnown RBP34.26■■■■□ 3.07
AP4E1-207ENST00000561441 B4GALNT3Q6L9W6 998 aa34.26■■■■□ 3.07
AP4E1-207ENST00000561441 ATF7IPQ6VMQ6 1270 aa34.26■■■■□ 3.07
AP4E1-207ENST00000561441 KDM3BQ7LBC6 1761 aa34.26■■■■□ 3.07
AP4E1-207ENST00000561441 SOS1Q07889 1333 aaPredicted RBP34.25■■■■□ 3.07
AP4E1-207ENST00000561441 NWD2Q9ULI1 1742 aa34.25■■■■□ 3.07
AP4E1-207ENST00000561441 KCNQ3O43525 872 aa34.25■■■■□ 3.07
AP4E1-207ENST00000561441 RLBP1P12271 317 aa34.25■■■■□ 3.07
AP4E1-207ENST00000561441 TRIM27P14373 513 aa34.24■■■■□ 3.07
AP4E1-207ENST00000561441 NKX1-1Q15270 411 aaPredicted RBP34.24■■■■□ 3.07
AP4E1-207ENST00000561441 SIPA1L3O60292 1781 aaPredicted RBP34.24■■■■□ 3.07
AP4E1-207ENST00000561441 MS4A1P11836 297 aa34.23■■■■□ 3.07
AP4E1-207ENST00000561441 SPATA31A1Q5TZJ5 1347 aa34.23■■■■□ 3.07
AP4E1-207ENST00000561441 DDX54Q8TDD1 881 aaKnown RBP34.22■■■■□ 3.07
AP4E1-207ENST00000561441 CLUAP1Q96AJ1 413 aa34.22■■■■□ 3.07
AP4E1-207ENST00000561441 MRC1P22897 1456 aa34.22■■■■□ 3.07
AP4E1-207ENST00000561441 DZIP1LQ8IYY4 767 aaKnown RBP34.22■■■■□ 3.07
AP4E1-207ENST00000561441 NFATC2IPQ8NCF5 419 aa34.22■■■■□ 3.07
AP4E1-207ENST00000561441 C8orf37Q96NL8 207 aa34.22■■■■□ 3.07
AP4E1-207ENST00000561441 COG6Q9Y2V7 657 aa34.22■■■■□ 3.07
AP4E1-207ENST00000561441 SHANK3Q9BYB0 1731 aa34.22■■■■□ 3.07
AP4E1-207ENST00000561441 LRP6O75581 1613 aa34.21■■■■□ 3.07
AP4E1-207ENST00000561441 ARHGAP45Q92619 1136 aa34.21■■■■□ 3.07
AP4E1-207ENST00000561441 THRAP3Q9Y2W1 955 aaKnown RBP34.21■■■■□ 3.07
AP4E1-207ENST00000561441 NGLY1Q96IV0 654 aa34.2■■■■□ 3.07
AP4E1-207ENST00000561441 SPATA31A5Q5VU36 1347 aa34.19■■■■□ 3.06
AP4E1-207ENST00000561441 SPATA31A7Q8IWB4 1347 aa34.19■■■■□ 3.06
AP4E1-207ENST00000561441 UNC5CLQ8IV45 518 aa34.19■■■■□ 3.06
AP4E1-207ENST00000561441 CCDC136Q96JN2 1154 aa34.19■■■■□ 3.06
AP4E1-207ENST00000561441 FTSJ3Q8IY81 847 aaKnown RBP34.19■■■■□ 3.06
AP4E1-207ENST00000561441 CABP4P57796 275 aa34.17■■■■□ 3.06
AP4E1-207ENST00000561441 HOXB7P09629 217 aa34.16■■■■□ 3.06
AP4E1-207ENST00000561441 FNBP4Q8N3X1 1017 aaPredicted RBP34.16■■■■□ 3.06
AP4E1-207ENST00000561441 CDCA7Q9BWT1 371 aaPredicted RBP34.16■■■■□ 3.06
AP4E1-207ENST00000561441 BCL9LQ86UU0 1499 aa34.16■■■■□ 3.06
AP4E1-207ENST00000561441 CCDC30Q5VVM6 783 aa34.15■■■■□ 3.06
AP4E1-207ENST00000561441 ERVV-2B6SEH9 535 aa34.14■■■■□ 3.06
AP4E1-207ENST00000561441 ZNF790Q6PG37 636 aa34.14■■■■□ 3.06
AP4E1-207ENST00000561441 HEG1Q9ULI3 1381 aa34.14■■■■□ 3.06
AP4E1-207ENST00000561441 SLC4A2P04920 1241 aa34.13■■■■□ 3.05
AP4E1-207ENST00000561441 EXOC5O00471 708 aa34.12■■■■□ 3.05
AP4E1-207ENST00000561441 MVPQ14764 893 aaKnown RBP34.12■■■■□ 3.05
AP4E1-207ENST00000561441 CCDC9Q9Y3X0 531 aaKnown RBP34.12■■■■□ 3.05
AP4E1-207ENST00000561441 WNK3Q9BYP7 1800 aa34.12■■■■□ 3.05
AP4E1-207ENST00000561441 SLC39A6Q13433 755 aa34.12■■■■□ 3.05
AP4E1-207ENST00000561441 BARGINQ6ZT62 677 aa34.11■■■■□ 3.05
AP4E1-207ENST00000561441 STK31Q9BXU1 1019 aa34.11■■■■□ 3.05
AP4E1-207ENST00000561441 API5Q9BZZ5 524 aaKnown RBP34.11■■■■□ 3.05
AP4E1-207ENST00000561441 VPS72Q15906 364 aa34.1■■■■□ 3.05
AP4E1-207ENST00000561441 HDGFL1Q5TGJ6 251 aa34.1■■■■□ 3.05
AP4E1-207ENST00000561441 GIGYF1O75420 1035 aaPredicted RBP34.09■■■■□ 3.05
AP4E1-207ENST00000561441 TMEM57Q8N5G2 664 aa34.08■■■■□ 3.05
AP4E1-207ENST00000561441 NECTIN2Q92692 538 aa34.08■■■■□ 3.05
AP4E1-207ENST00000561441 TNS2Q63HR2 1409 aa34.08■■■■□ 3.05
AP4E1-207ENST00000561441 CHMP4AQ9BY43 222 aa34.08■■■■□ 3.05
AP4E1-207ENST00000561441 PTPRCP08575 1304 aa34.07■■■■□ 3.04
AP4E1-207ENST00000561441 ABCC4O15439 1325 aa34.06■■■■□ 3.04
AP4E1-207ENST00000561441 AAMPQ13685 434 aa34.05■■■■□ 3.04
AP4E1-207ENST00000561441 MEX3CQ5U5Q3 659 aaKnown RBP34.05■■■■□ 3.04
AP4E1-207ENST00000561441 USP21Q9UK80 565 aa34.05■■■■□ 3.04
AP4E1-207ENST00000561441 EIF2S2P20042 333 aaKnown RBP34.04■■■■□ 3.04
AP4E1-207ENST00000561441 G2E3Q7L622 706 aa34.04■■■■□ 3.04
AP4E1-207ENST00000561441 ITPRIPQ8IWB1 547 aa34.04■■■■□ 3.04
AP4E1-207ENST00000561441 TTC5Q8N0Z6 440 aa34.04■■■■□ 3.04
AP4E1-207ENST00000561441 DDB1Q16531 1140 aa34.04■■■■□ 3.04
AP4E1-207ENST00000561441 DDX19BQ9UMR2 479 aa34.03■■■■□ 3.04
AP4E1-207ENST00000561441 RGS12O14924 1447 aa34.03■■■■□ 3.04
AP4E1-207ENST00000561441 ZNF496Q96IT1 587 aaPredicted RBP34.02■■■■□ 3.04
AP4E1-207ENST00000561441 TOGARAM1Q9Y4F4 1720 aa34.01■■■■□ 3.04
AP4E1-207ENST00000561441 PRAMEF22A3QJZ6 481 aa34.01■■■■□ 3.03
AP4E1-207ENST00000561441 FMNL2Q96PY5 1086 aa33.99■■■■□ 3.03
AP4E1-207ENST00000561441 FLIIQ13045 1269 aa33.98■■■■□ 3.03
AP4E1-207ENST00000561441 TMOD3Q9NYL9 352 aa33.97■■■■□ 3.03
AP4E1-207ENST00000561441 CHPF2Q9P2E5 772 aa33.97■■■■□ 3.03
AP4E1-207ENST00000561441 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.97■■■■□ 3.03
AP4E1-207ENST00000561441 FAM98CQ17RN3 349 aaKnown RBP33.97■■■■□ 3.03
AP4E1-207ENST00000561441 SNRPA1P09661 255 aaKnown RBP33.95■■■■□ 3.03
AP4E1-207ENST00000561441 AFF2P51816 1311 aa33.95■■■■□ 3.02
AP4E1-207ENST00000561441 DBF4Q9UBU7 674 aaPredicted RBP33.94■■■■□ 3.02
AP4E1-207ENST00000561441 INTS3Q68E01 1043 aaKnown RBP33.93■■■■□ 3.02
AP4E1-207ENST00000561441 PAPPAQ13219 1627 aa33.93■■■■□ 3.02
AP4E1-207ENST00000561441 MARCH10Q8NA82 808 aaPredicted RBP33.93■■■■□ 3.02
AP4E1-207ENST00000561441 PIGBQ92521 554 aa33.93■■■■□ 3.02
AP4E1-207ENST00000561441 PHAXQ9H814 394 aaKnown RBP33.92■■■■□ 3.02
AP4E1-207ENST00000561441 FKBP5Q13451 457 aaPredicted RBP33.91■■■■□ 3.02
AP4E1-207ENST00000561441 ZBTB40Q9NUA8 1239 aa33.91■■■■□ 3.02
AP4E1-207ENST00000561441 ZBTB7BO15156 539 aaPredicted RBP33.9■■■■□ 3.02
AP4E1-207ENST00000561441 GLI3P10071 1580 aa33.9■■■■□ 3.02
AP4E1-207ENST00000561441 PCDHB15Q9Y5E8 787 aa33.9■■■■□ 3.02
AP4E1-207ENST00000561441 KCPQ6ZWJ8 1503 aa33.9■■■■□ 3.02
AP4E1-207ENST00000561441 C5P01031 1676 aa33.89■■■■□ 3.02
AP4E1-207ENST00000561441 KDM2BQ8NHM5 1336 aa33.89■■■■□ 3.02
AP4E1-207ENST00000561441 CACNA1FO60840 1977 aa33.89■■■■□ 3.02
AP4E1-207ENST00000561441 F6X3S4 739 aa33.88■■■■□ 3.01
AP4E1-207ENST00000561441 BCL9O00512 1426 aa33.88■■■■□ 3.01
AP4E1-207ENST00000561441 PELP1Q8IZL8 1130 aaKnown RBP33.88■■■■□ 3.01
AP4E1-207ENST00000561441 CHMP4BQ9H444 224 aaKnown RBP33.88■■■■□ 3.01
AP4E1-207ENST00000561441 USP16Q9Y5T5 823 aa33.88■■■■□ 3.01
AP4E1-207ENST00000561441 UBR2Q8IWV8 1755 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms