RNA–Protein interactions for RNA: ENST00000561309.1

IGDCC4-206, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 3

Gene IGDCC4, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-206ENST00000561309 CHD4Q14839 1912 aa23.52■■□□□ 1.36
IGDCC4-206ENST00000561309 ERVV-2B6SEH9 535 aa23.51■■□□□ 1.35
IGDCC4-206ENST00000561309 ATG3Q9NT62 314 aa23.51■■□□□ 1.35
IGDCC4-206ENST00000561309 MAP3K5Q99683 1374 aa23.51■■□□□ 1.35
IGDCC4-206ENST00000561309 SCN11AQ9UI33 1791 aa23.5■■□□□ 1.35
IGDCC4-206ENST00000561309 CABP4P57796 275 aa23.5■■□□□ 1.35
IGDCC4-206ENST00000561309 RBM42Q9BTD8 480 aaKnown RBP23.5■■□□□ 1.35
IGDCC4-206ENST00000561309 LINC00116Q8NCU8 138 aa23.49■■□□□ 1.35
IGDCC4-206ENST00000561309 PELP1Q8IZL8 1130 aaKnown RBP23.48■■□□□ 1.35
IGDCC4-206ENST00000561309 KDM6AO15550 1401 aaPredicted RBP23.48■■□□□ 1.35
IGDCC4-206ENST00000561309 HMOX1P09601 288 aa23.47■■□□□ 1.35
IGDCC4-206ENST00000561309 GPR162Q16538 588 aa23.47■■□□□ 1.35
IGDCC4-206ENST00000561309 KDRP35968 1356 aa23.47■■□□□ 1.35
IGDCC4-206ENST00000561309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.46■■□□□ 1.35
IGDCC4-206ENST00000561309 DIAPH1O60610 1272 aaKnown RBP23.46■■□□□ 1.35
IGDCC4-206ENST00000561309 ITPK1Q13572 414 aa23.46■■□□□ 1.35
IGDCC4-206ENST00000561309 SMIM5Q71RC9 77 aa23.46■■□□□ 1.35
IGDCC4-206ENST00000561309 GNPATO15228 680 aa23.45■■□□□ 1.34
IGDCC4-206ENST00000561309 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.34
IGDCC4-206ENST00000561309 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
IGDCC4-206ENST00000561309 SSFA2P28290 1259 aa23.44■■□□□ 1.34
IGDCC4-206ENST00000561309 AMIGO3Q86WK7 504 aa23.43■■□□□ 1.34
IGDCC4-206ENST00000561309 NLGN2Q8NFZ4 835 aa23.43■■□□□ 1.34
IGDCC4-206ENST00000561309 NPC1L1Q9UHC9 1359 aa23.42■■□□□ 1.34
IGDCC4-206ENST00000561309 NFATC2IPQ8NCF5 419 aa23.42■■□□□ 1.34
IGDCC4-206ENST00000561309 AKAP4Q5JQC9 854 aa23.41■■□□□ 1.34
IGDCC4-206ENST00000561309 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
IGDCC4-206ENST00000561309 PTCD1O75127 700 aaKnown RBP23.4■■□□□ 1.34
IGDCC4-206ENST00000561309 RTCBQ9Y3I0 505 aaKnown RBP23.39■■□□□ 1.33
IGDCC4-206ENST00000561309 SLC4A9Q96Q91 983 aa23.38■■□□□ 1.33
IGDCC4-206ENST00000561309 MYH14Q7Z406 1995 aaKnown RBP23.37■■□□□ 1.33
IGDCC4-206ENST00000561309 TRAPPC3LQ5T215 181 aa23.36■■□□□ 1.33
IGDCC4-206ENST00000561309 MTHFSDQ2M296 383 aaKnown RBP23.35■■□□□ 1.33
IGDCC4-206ENST00000561309 LGR6Q9HBX8 967 aa23.35■■□□□ 1.33
IGDCC4-206ENST00000561309 TJP1Q07157 1748 aa23.35■■□□□ 1.33
IGDCC4-206ENST00000561309 COL3A1P02461 1466 aaPredicted RBP23.35■■□□□ 1.33
IGDCC4-206ENST00000561309 CFAP53Q96M91 514 aa23.34■■□□□ 1.33
IGDCC4-206ENST00000561309 SLC52A2Q9HAB3 445 aa23.34■■□□□ 1.33
IGDCC4-206ENST00000561309 CD2APQ9Y5K6 639 aa23.34■■□□□ 1.33
IGDCC4-206ENST00000561309 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.33
IGDCC4-206ENST00000561309 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
IGDCC4-206ENST00000561309 RNMTO43148 476 aaKnown RBP23.33■■□□□ 1.33
IGDCC4-206ENST00000561309 RC3H1Q5TC82 1133 aaKnown RBP23.32■■□□□ 1.32
IGDCC4-206ENST00000561309 RFC4P35249 363 aa23.31■■□□□ 1.32
IGDCC4-206ENST00000561309 RPS6KA4O75676 772 aa23.3■■□□□ 1.32
IGDCC4-206ENST00000561309 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
IGDCC4-206ENST00000561309 ADRA2BP18089 450 aa23.29■■□□□ 1.32
IGDCC4-206ENST00000561309 CRKLP46109 303 aaKnown RBP23.29■■□□□ 1.32
IGDCC4-206ENST00000561309 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
IGDCC4-206ENST00000561309 MRC1P22897 1456 aa23.29■■□□□ 1.32
IGDCC4-206ENST00000561309 ADAMTS7Q9UKP4 1686 aa23.28■■□□□ 1.32
IGDCC4-206ENST00000561309 GRIN3BO60391 1043 aa23.28■■□□□ 1.32
IGDCC4-206ENST00000561309 MMP10P09238 476 aa23.28■■□□□ 1.32
IGDCC4-206ENST00000561309 YBX3P16989 372 aaKnown RBP eCLIP23.28■■□□□ 1.32
IGDCC4-206ENST00000561309 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
IGDCC4-206ENST00000561309 UTRNP46939 3433 aa23.27■■□□□ 1.32
IGDCC4-206ENST00000561309 NLGN1Q8N2Q7 840 aa23.27■■□□□ 1.32
IGDCC4-206ENST00000561309 ZNF784Q8NCA9 323 aaPredicted RBP23.27■■□□□ 1.32
IGDCC4-206ENST00000561309 NUDCQ9Y266 331 aa23.27■■□□□ 1.32
IGDCC4-206ENST00000561309 GAS2L2Q8NHY3 880 aa23.26■■□□□ 1.31
IGDCC4-206ENST00000561309 WWC3Q9ULE0 1092 aa23.26■■□□□ 1.31
IGDCC4-206ENST00000561309 N4BP2Q86UW6 1770 aaPredicted RBP23.25■■□□□ 1.31
IGDCC4-206ENST00000561309 PPP2R1AP30153 589 aa23.25■■□□□ 1.31
IGDCC4-206ENST00000561309 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
IGDCC4-206ENST00000561309 GNAT3A8MTJ3 354 aa23.24■■□□□ 1.31
IGDCC4-206ENST00000561309 TEFQ10587 303 aa23.24■■□□□ 1.31
IGDCC4-206ENST00000561309 UBR2Q8IWV8 1755 aa23.24■■□□□ 1.31
IGDCC4-206ENST00000561309 KIF13BQ9NQT8 1826 aa23.24■■□□□ 1.31
IGDCC4-206ENST00000561309 SIPA1L3O60292 1781 aaPredicted RBP23.23■■□□□ 1.31
IGDCC4-206ENST00000561309 PRKAR2BP31323 418 aa23.23■■□□□ 1.31
IGDCC4-206ENST00000561309 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
IGDCC4-206ENST00000561309 GYS1P13807 737 aa23.22■■□□□ 1.31
IGDCC4-206ENST00000561309 CCDC87Q9NVE4 849 aa23.22■■□□□ 1.31
IGDCC4-206ENST00000561309 PARP3Q9Y6F1 533 aa23.22■■□□□ 1.31
IGDCC4-206ENST00000561309 KCPQ6ZWJ8 1503 aa23.22■■□□□ 1.31
IGDCC4-206ENST00000561309 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
IGDCC4-206ENST00000561309 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
IGDCC4-206ENST00000561309 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
IGDCC4-206ENST00000561309 INTS5Q6P9B9 1019 aaKnown RBP23.19■■□□□ 1.3
IGDCC4-206ENST00000561309 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
IGDCC4-206ENST00000561309 ZPR1O75312 459 aa23.18■■□□□ 1.3
IGDCC4-206ENST00000561309 IL17REQ8NFR9 667 aa23.18■■□□□ 1.3
IGDCC4-206ENST00000561309 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
IGDCC4-206ENST00000561309 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
IGDCC4-206ENST00000561309 USP42Q9H9J4 1324 aaKnown RBP23.17■■□□□ 1.3
IGDCC4-206ENST00000561309 CYP19A1P11511 503 aaPredicted RBP23.17■■□□□ 1.3
IGDCC4-206ENST00000561309 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
IGDCC4-206ENST00000561309 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
IGDCC4-206ENST00000561309 FKBP8Q14318 412 aa23.15■■□□□ 1.3
IGDCC4-206ENST00000561309 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
IGDCC4-206ENST00000561309 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.29
IGDCC4-206ENST00000561309 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
IGDCC4-206ENST00000561309 ZBTB1Q9Y2K1 713 aa23.14■■□□□ 1.29
IGDCC4-206ENST00000561309 C10orf71Q711Q0 1435 aa23.14■■□□□ 1.29
IGDCC4-206ENST00000561309 COL15A1P39059 1388 aa23.14■■□□□ 1.29
IGDCC4-206ENST00000561309 PXDNLA1KZ92 1463 aa23.13■■□□□ 1.29
IGDCC4-206ENST00000561309 A0A0G2JLW4 131 aa23.13■■□□□ 1.29
IGDCC4-206ENST00000561309 FCHSD2O94868 740 aa23.13■■□□□ 1.29
IGDCC4-206ENST00000561309 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
IGDCC4-206ENST00000561309 TGFB2P61812 414 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms