RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 C4BP0C0L5 1744 aa22.21■■□□□ 1.15
CRTC3-212ENST00000561218 MTHFSP49914 203 aa22.21■■□□□ 1.15
CRTC3-212ENST00000561218 CABP4P57796 275 aa22.21■■□□□ 1.15
CRTC3-212ENST00000561218 ITPK1Q13572 414 aa22.21■■□□□ 1.15
CRTC3-212ENST00000561218 SSFA2P28290 1259 aa22.2■■□□□ 1.14
CRTC3-212ENST00000561218 SMIM5Q71RC9 77 aa22.2■■□□□ 1.14
CRTC3-212ENST00000561218 AMIGO3Q86WK7 504 aa22.2■■□□□ 1.14
CRTC3-212ENST00000561218 TAF1LQ8IZX4 1826 aa22.2■■□□□ 1.14
CRTC3-212ENST00000561218 GNPATO15228 680 aa22.19■■□□□ 1.14
CRTC3-212ENST00000561218 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
CRTC3-212ENST00000561218 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
CRTC3-212ENST00000561218 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
CRTC3-212ENST00000561218 KDRP35968 1356 aa22.16■■□□□ 1.14
CRTC3-212ENST00000561218 UTRNP46939 3433 aa22.16■■□□□ 1.14
CRTC3-212ENST00000561218 CD2APQ9Y5K6 639 aa22.16■■□□□ 1.14
CRTC3-212ENST00000561218 KDM6AO15550 1401 aaPredicted RBP22.15■■□□□ 1.14
CRTC3-212ENST00000561218 ZNF784Q8NCA9 323 aaPredicted RBP22.15■■□□□ 1.14
CRTC3-212ENST00000561218 CNGB1Q14028 1251 aaPredicted RBP22.14■■□□□ 1.13
CRTC3-212ENST00000561218 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.13
CRTC3-212ENST00000561218 SLC4A9Q96Q91 983 aa22.13■■□□□ 1.13
CRTC3-212ENST00000561218 RTCBQ9Y3I0 505 aaKnown RBP22.13■■□□□ 1.13
CRTC3-212ENST00000561218 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
CRTC3-212ENST00000561218 DIAPH1O60610 1272 aaKnown RBP22.12■■□□□ 1.13
CRTC3-212ENST00000561218 HMOX1P09601 288 aa22.12■■□□□ 1.13
CRTC3-212ENST00000561218 TRAPPC3LQ5T215 181 aa22.12■■□□□ 1.13
CRTC3-212ENST00000561218 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
CRTC3-212ENST00000561218 PTCD1O75127 700 aaKnown RBP22.11■■□□□ 1.13
CRTC3-212ENST00000561218 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
CRTC3-212ENST00000561218 RC3H1Q5TC82 1133 aaKnown RBP22.11■■□□□ 1.13
CRTC3-212ENST00000561218 YBX3P16989 372 aaKnown RBP eCLIP22.1■■□□□ 1.133e-7■■□□□ 12.8
CRTC3-212ENST00000561218 NPC1L1Q9UHC9 1359 aa22.08■■□□□ 1.12
CRTC3-212ENST00000561218 CHD4Q14839 1912 aa22.08■■□□□ 1.12
CRTC3-212ENST00000561218 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
CRTC3-212ENST00000561218 RPS6KA4O75676 772 aa22.07■■□□□ 1.12
CRTC3-212ENST00000561218 ADRA2BP18089 450 aa22.07■■□□□ 1.12
CRTC3-212ENST00000561218 MMP10P09238 476 aa22.06■■□□□ 1.12
CRTC3-212ENST00000561218 NLGN1Q8N2Q7 840 aa22.06■■□□□ 1.12
CRTC3-212ENST00000561218 ARHGEF1Q92888 912 aaKnown RBP22.06■■□□□ 1.12
CRTC3-212ENST00000561218 LGR6Q9HBX8 967 aa22.06■■□□□ 1.12
CRTC3-212ENST00000561218 RFC4P35249 363 aa22.05■■□□□ 1.12
CRTC3-212ENST00000561218 SLC52A2Q9HAB3 445 aa22.05■■□□□ 1.12
CRTC3-212ENST00000561218 ZNF831Q5JPB2 1677 aa22.04■■□□□ 1.12
CRTC3-212ENST00000561218 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
CRTC3-212ENST00000561218 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
CRTC3-212ENST00000561218 RNMTO43148 476 aaKnown RBP22.03■■□□□ 1.12
CRTC3-212ENST00000561218 MTHFSDQ2M296 383 aaKnown RBP22.03■■□□□ 1.12
CRTC3-212ENST00000561218 CRKLP46109 303 aaKnown RBP22.02■■□□□ 1.12
CRTC3-212ENST00000561218 GYS1P13807 737 aa22■■□□□ 1.11
CRTC3-212ENST00000561218 WWC3Q9ULE0 1092 aa22■■□□□ 1.11
CRTC3-212ENST00000561218 SLC39A6Q13433 755 aa21.98■■□□□ 1.11
CRTC3-212ENST00000561218 DNAJC10Q8IXB1 793 aa21.98■■□□□ 1.11
CRTC3-212ENST00000561218 CFAP53Q96M91 514 aa21.98■■□□□ 1.11
CRTC3-212ENST00000561218 SCN11AQ9UI33 1791 aa21.97■■□□□ 1.11
CRTC3-212ENST00000561218 PARP3Q9Y6F1 533 aa21.97■■□□□ 1.11
CRTC3-212ENST00000561218 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
CRTC3-212ENST00000561218 INTS5Q6P9B9 1019 aaKnown RBP21.96■■□□□ 1.11
CRTC3-212ENST00000561218 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
CRTC3-212ENST00000561218 COL3A1P02461 1466 aaPredicted RBP21.96■■□□□ 1.11
CRTC3-212ENST00000561218 TGFB2P61812 414 aa21.95■■□□□ 1.1
CRTC3-212ENST00000561218 GAS2L2Q8NHY3 880 aa21.95■■□□□ 1.1
CRTC3-212ENST00000561218 SRP68Q9UHB9 627 aaKnown RBP21.95■■□□□ 1.1
CRTC3-212ENST00000561218 MYH14Q7Z406 1995 aaKnown RBP21.94■■□□□ 1.1
CRTC3-212ENST00000561218 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
CRTC3-212ENST00000561218 CYP19A1P11511 503 aaPredicted RBP21.93■■□□□ 1.1
CRTC3-212ENST00000561218 MRC1P22897 1456 aa21.93■■□□□ 1.1
CRTC3-212ENST00000561218 USP42Q9H9J4 1324 aaKnown RBP21.93■■□□□ 1.1
CRTC3-212ENST00000561218 NUDCQ9Y266 331 aa21.93■■□□□ 1.1
CRTC3-212ENST00000561218 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
CRTC3-212ENST00000561218 ZPR1O75312 459 aa21.92■■□□□ 1.1
CRTC3-212ENST00000561218 C1QTNF8P60827 252 aa21.92■■□□□ 1.1
CRTC3-212ENST00000561218 TEFQ10587 303 aa21.92■■□□□ 1.1
CRTC3-212ENST00000561218 FKBP8Q14318 412 aa21.92■■□□□ 1.1
CRTC3-212ENST00000561218 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
CRTC3-212ENST00000561218 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
CRTC3-212ENST00000561218 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
CRTC3-212ENST00000561218 VSIG10Q8N0Z9 540 aa21.91■■□□□ 1.1
CRTC3-212ENST00000561218 TJP1Q07157 1748 aa21.9■■□□□ 1.1
CRTC3-212ENST00000561218 PPP2R1AP30153 589 aa21.9■■□□□ 1.1
CRTC3-212ENST00000561218 IL17REQ8NFR9 667 aa21.9■■□□□ 1.1
CRTC3-212ENST00000561218 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
CRTC3-212ENST00000561218 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
CRTC3-212ENST00000561218 SOS1Q07889 1333 aaPredicted RBP21.89■■□□□ 1.1
CRTC3-212ENST00000561218 PRKAR2BP31323 418 aa21.89■■□□□ 1.09
CRTC3-212ENST00000561218 BCS1LQ9Y276 419 aa21.89■■□□□ 1.09
CRTC3-212ENST00000561218 STARD3NLO95772 234 aa21.88■■□□□ 1.09
CRTC3-212ENST00000561218 DPEP1P16444 411 aa21.88■■□□□ 1.09
CRTC3-212ENST00000561218 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
CRTC3-212ENST00000561218 KCPQ6ZWJ8 1503 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 C4AP0C0L4 1744 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 U2AF1L5P0DN76 240 aaPredicted RBP21.87■■□□□ 1.09
CRTC3-212ENST00000561218 U2AF1Q01081 240 aaKnown RBP eCLIP21.87■■□□□ 1.09
CRTC3-212ENST00000561218 DDR1Q08345 913 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 RSPH6AQ9H0K4 717 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 ZBTB1Q9Y2K1 713 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 ATP10DQ9P241 1426 aa21.87■■□□□ 1.09
CRTC3-212ENST00000561218 ADAMTS7Q9UKP4 1686 aa21.86■■□□□ 1.09
CRTC3-212ENST00000561218 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
CRTC3-212ENST00000561218 TM4SF1P30408 202 aa21.85■■□□□ 1.09
CRTC3-212ENST00000561218 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms