RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 HMGB2P26583 209 aaKnown RBP36.97■■■■□ 3.51
SNRPA1-215ENST00000561187 KIF7Q2M1P5 1343 aa36.96■■■■□ 3.51
SNRPA1-215ENST00000561187 PLEKHO1Q53GL0 409 aaPredicted RBP36.96■■■■□ 3.51
SNRPA1-215ENST00000561187 KDM6AO15550 1401 aaPredicted RBP36.95■■■■□ 3.51
SNRPA1-215ENST00000561187 RBM42Q9BTD8 480 aaKnown RBP36.93■■■■□ 3.5
SNRPA1-215ENST00000561187 SSFA2P28290 1259 aa36.92■■■■□ 3.5
SNRPA1-215ENST00000561187 SULT6B1Q6IMI4 303 aa36.92■■■■□ 3.5
SNRPA1-215ENST00000561187 WWC3Q9ULE0 1092 aa36.92■■■■□ 3.5
SNRPA1-215ENST00000561187 PLEKHG2Q9H7P9 1386 aa36.91■■■■□ 3.5
SNRPA1-215ENST00000561187 DCAF5Q96JK2 942 aa36.91■■■■□ 3.5
SNRPA1-215ENST00000561187 KDRP35968 1356 aa36.91■■■■□ 3.5
SNRPA1-215ENST00000561187 HSP90AB1P08238 724 aaKnown RBP36.89■■■■□ 3.5
SNRPA1-215ENST00000561187 AMER1Q5JTC6 1135 aaPredicted RBP36.89■■■■□ 3.5
SNRPA1-215ENST00000561187 ERVV-2B6SEH9 535 aa36.88■■■■□ 3.49
SNRPA1-215ENST00000561187 CABP4P57796 275 aa36.88■■■■□ 3.49
SNRPA1-215ENST00000561187 SLC4A9Q96Q91 983 aa36.88■■■■□ 3.49
SNRPA1-215ENST00000561187 AMOTQ4VCS5 1084 aa36.87■■■■□ 3.49
SNRPA1-215ENST00000561187 C1orf141Q5JVX7 400 aa36.87■■■■□ 3.49
SNRPA1-215ENST00000561187 CD2APQ9Y5K6 639 aa36.86■■■■□ 3.49
SNRPA1-215ENST00000561187 IL13P35225 146 aa36.85■■■■□ 3.49
SNRPA1-215ENST00000561187 MTHFSP49914 203 aa36.85■■■■□ 3.49
SNRPA1-215ENST00000561187 CNGB1Q14028 1251 aaPredicted RBP36.85■■■■□ 3.49
SNRPA1-215ENST00000561187 CC2D1BQ5T0F9 858 aaKnown RBP36.82■■■■□ 3.48
SNRPA1-215ENST00000561187 COL5A3P25940 1745 aaPredicted RBP36.8■■■■□ 3.48
SNRPA1-215ENST00000561187 GRIN3BO60391 1043 aa36.8■■■■□ 3.48
SNRPA1-215ENST00000561187 PTCD1O75127 700 aaKnown RBP36.79■■■■□ 3.48
SNRPA1-215ENST00000561187 RTCBQ9Y3I0 505 aaKnown RBP36.79■■■■□ 3.48
SNRPA1-215ENST00000561187 HMOX1P09601 288 aa36.77■■■■□ 3.48
SNRPA1-215ENST00000561187 MMP10P09238 476 aa36.76■■■■□ 3.48
SNRPA1-215ENST00000561187 NFATC2IPQ8NCF5 419 aa36.76■■■■□ 3.48
SNRPA1-215ENST00000561187 ZNF831Q5JPB2 1677 aa36.74■■■■□ 3.47
SNRPA1-215ENST00000561187 TRAPPC3LQ5T215 181 aa36.74■■■■□ 3.47
SNRPA1-215ENST00000561187 CICQ96RK0 1608 aaPredicted RBP36.72■■■■□ 3.47
SNRPA1-215ENST00000561187 CNTNAP4Q9C0A0 1308 aa36.72■■■■□ 3.47
SNRPA1-215ENST00000561187 SCN11AQ9UI33 1791 aa36.72■■■■□ 3.47
SNRPA1-215ENST00000561187 MYH14Q7Z406 1995 aaKnown RBP36.71■■■■□ 3.47
SNRPA1-215ENST00000561187 ARHGEF1Q92888 912 aaKnown RBP36.71■■■■□ 3.47
SNRPA1-215ENST00000561187 C4AP0C0L4 1744 aa36.69■■■■□ 3.46
SNRPA1-215ENST00000561187 PER1O15534 1290 aaPredicted RBP36.69■■■■□ 3.46
SNRPA1-215ENST00000561187 TJP1Q07157 1748 aa36.68■■■■□ 3.46
SNRPA1-215ENST00000561187 GIGYF1O75420 1035 aaPredicted RBP36.67■■■■□ 3.46
SNRPA1-215ENST00000561187 RC3H1Q5TC82 1133 aaKnown RBP36.67■■■■□ 3.46
SNRPA1-215ENST00000561187 RFC4P35249 363 aa36.66■■■■□ 3.46
SNRPA1-215ENST00000561187 C1QTNF8P60827 252 aa36.66■■■■□ 3.46
SNRPA1-215ENST00000561187 AKAP4Q5JQC9 854 aa36.66■■■■□ 3.46
SNRPA1-215ENST00000561187 LGR6Q9HBX8 967 aa36.66■■■■□ 3.46
SNRPA1-215ENST00000561187 RPS6KA4O75676 772 aa36.65■■■■□ 3.46
SNRPA1-215ENST00000561187 CRKLP46109 303 aaKnown RBP36.65■■■■□ 3.46
SNRPA1-215ENST00000561187 ATP10DQ9P241 1426 aa36.65■■■■□ 3.46
SNRPA1-215ENST00000561187 SENP3-EIF4A1A0A087X0R7 540 aa36.64■■■■□ 3.46
SNRPA1-215ENST00000561187 DIAPH1O60610 1272 aaKnown RBP36.63■■■■□ 3.45
SNRPA1-215ENST00000561187 GYS1P13807 737 aa36.63■■■■□ 3.45
SNRPA1-215ENST00000561187 ADRA2BP18089 450 aa36.63■■■■□ 3.45
SNRPA1-215ENST00000561187 VIRMAQ69YN4 1812 aaKnown RBP36.62■■■■□ 3.45
SNRPA1-215ENST00000561187 PXDNLA1KZ92 1463 aa36.62■■■■□ 3.45
SNRPA1-215ENST00000561187 N4BP2Q86UW6 1770 aaPredicted RBP36.61■■■■□ 3.45
SNRPA1-215ENST00000561187 NLGN1Q8N2Q7 840 aa36.61■■■■□ 3.45
SNRPA1-215ENST00000561187 SLC52A2Q9HAB3 445 aa36.61■■■■□ 3.45
SNRPA1-215ENST00000561187 SRP68Q9UHB9 627 aaKnown RBP36.61■■■■□ 3.45
SNRPA1-215ENST00000561187 SLC39A6Q13433 755 aa36.6■■■■□ 3.45
SNRPA1-215ENST00000561187 RNMTO43148 476 aaKnown RBP36.59■■■■□ 3.45
SNRPA1-215ENST00000561187 MTHFSDQ2M296 383 aaKnown RBP36.59■■■■□ 3.45
SNRPA1-215ENST00000561187 ZNF526Q8TF50 670 aaPredicted RBP36.59■■■■□ 3.45
SNRPA1-215ENST00000561187 KIAA1551Q9HCM1 1747 aa36.58■■■■□ 3.45
SNRPA1-215ENST00000561187 C10orf71Q711Q0 1435 aa36.58■■■■□ 3.45
SNRPA1-215ENST00000561187 KIF13BQ9NQT8 1826 aa36.57■■■■□ 3.45
SNRPA1-215ENST00000561187 MRC1P22897 1456 aa36.57■■■■□ 3.45
SNRPA1-215ENST00000561187 DNAJC10Q8IXB1 793 aa36.57■■■■□ 3.44
SNRPA1-215ENST00000561187 COL3A1P02461 1466 aaPredicted RBP36.56■■■■□ 3.44
SNRPA1-215ENST00000561187 U2SURPO15042 1029 aaKnown RBP36.56■■■■□ 3.44
SNRPA1-215ENST00000561187 A0A0G2JLW4 131 aa36.55■■■■□ 3.44
SNRPA1-215ENST00000561187 PARP3Q9Y6F1 533 aa36.55■■■■□ 3.44
SNRPA1-215ENST00000561187 CCDC87Q9NVE4 849 aa36.54■■■■□ 3.44
SNRPA1-215ENST00000561187 INTS5Q6P9B9 1019 aaKnown RBP36.52■■■■□ 3.44
SNRPA1-215ENST00000561187 BCS1LQ9Y276 419 aa36.52■■■■□ 3.44
SNRPA1-215ENST00000561187 ADCY9O60503 1353 aa36.52■■■■□ 3.44
SNRPA1-215ENST00000561187 KCPQ6ZWJ8 1503 aa36.51■■■■□ 3.44
SNRPA1-215ENST00000561187 FKBP8Q14318 412 aa36.51■■■■□ 3.44
SNRPA1-215ENST00000561187 USP42Q9H9J4 1324 aaKnown RBP36.51■■■■□ 3.43
SNRPA1-215ENST00000561187 DPEP1P16444 411 aa36.49■■■■□ 3.43
SNRPA1-215ENST00000561187 GPBP1L1Q9HC44 474 aaPredicted RBP36.48■■■■□ 3.43
SNRPA1-215ENST00000561187 NPC1L1Q9UHC9 1359 aa36.48■■■■□ 3.43
SNRPA1-215ENST00000561187 ADAMTS7Q9UKP4 1686 aa36.48■■■■□ 3.43
SNRPA1-215ENST00000561187 TGFB2P61812 414 aa36.46■■■■□ 3.43
SNRPA1-215ENST00000561187 DDR1Q08345 913 aa36.46■■■■□ 3.43
SNRPA1-215ENST00000561187 SOS1Q07889 1333 aaPredicted RBP36.43■■■■□ 3.42
SNRPA1-215ENST00000561187 CYP19A1P11511 503 aaPredicted RBP36.43■■■■□ 3.42
SNRPA1-215ENST00000561187 USPL1Q5W0Q7 1092 aa36.43■■■■□ 3.42
SNRPA1-215ENST00000561187 ZBTB1Q9Y2K1 713 aa36.43■■■■□ 3.42
SNRPA1-215ENST00000561187 FCHSD2O94868 740 aa36.41■■■■□ 3.42
SNRPA1-215ENST00000561187 ZPR1O75312 459 aa36.4■■■■□ 3.42
SNRPA1-215ENST00000561187 COL15A1P39059 1388 aa36.4■■■■□ 3.42
SNRPA1-215ENST00000561187 BRCA1P38398 1863 aaKnown RBP36.39■■■■□ 3.42
SNRPA1-215ENST00000561187 UBR2Q8IWV8 1755 aa36.39■■■■□ 3.42
SNRPA1-215ENST00000561187 TTC5Q8N0Z6 440 aa36.38■■■■□ 3.41
SNRPA1-215ENST00000561187 ARHGAP27Q6ZUM4 889 aa36.37■■■■□ 3.41
SNRPA1-215ENST00000561187 CANXP27824 592 aaKnown RBP36.36■■■■□ 3.41
SNRPA1-215ENST00000561187 GAS2L2Q8NHY3 880 aa36.36■■■■□ 3.41
SNRPA1-215ENST00000561187 GNAT3A8MTJ3 354 aa36.35■■■■□ 3.41
SNRPA1-215ENST00000561187 POLRMTO00411 1230 aaKnown RBP36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms