RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
CHRNA3-208ENST00000561128 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
CHRNA3-208ENST00000561128 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
CHRNA3-208ENST00000561128 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
CHRNA3-208ENST00000561128 SMARCC1Q92922 1105 aaPredicted RBP17.14■□□□□ 0.33
CHRNA3-208ENST00000561128 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
CHRNA3-208ENST00000561128 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
CHRNA3-208ENST00000561128 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
CHRNA3-208ENST00000561128 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
CHRNA3-208ENST00000561128 U2SURPO15042 1029 aaKnown RBP17.12■□□□□ 0.33
CHRNA3-208ENST00000561128 C4AP0C0L4 1744 aa17.12■□□□□ 0.33
CHRNA3-208ENST00000561128 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
CHRNA3-208ENST00000561128 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
CHRNA3-208ENST00000561128 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
CHRNA3-208ENST00000561128 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
CHRNA3-208ENST00000561128 PHF14O94880 888 aa17.1■□□□□ 0.33
CHRNA3-208ENST00000561128 HSP90AB1P08238 724 aaKnown RBP17.1■□□□□ 0.33
CHRNA3-208ENST00000561128 CABP4P57796 275 aa17.1■□□□□ 0.33
CHRNA3-208ENST00000561128 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
CHRNA3-208ENST00000561128 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
CHRNA3-208ENST00000561128 ARXQ96QS3 562 aa17.09■□□□□ 0.33
CHRNA3-208ENST00000561128 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
CHRNA3-208ENST00000561128 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
CHRNA3-208ENST00000561128 MSH5O43196 834 aa17.08■□□□□ 0.32
CHRNA3-208ENST00000561128 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
CHRNA3-208ENST00000561128 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
CHRNA3-208ENST00000561128 AK7Q96M32 723 aa17.08■□□□□ 0.32
CHRNA3-208ENST00000561128 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
CHRNA3-208ENST00000561128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
CHRNA3-208ENST00000561128 GNPATO15228 680 aa17.07■□□□□ 0.32
CHRNA3-208ENST00000561128 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
CHRNA3-208ENST00000561128 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
CHRNA3-208ENST00000561128 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
CHRNA3-208ENST00000561128 MAP3K5Q99683 1374 aa17.06■□□□□ 0.32
CHRNA3-208ENST00000561128 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
CHRNA3-208ENST00000561128 SLC39A6Q13433 755 aa17.06■□□□□ 0.32
CHRNA3-208ENST00000561128 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
CHRNA3-208ENST00000561128 NLGN2Q8NFZ4 835 aa17.05■□□□□ 0.32
CHRNA3-208ENST00000561128 DDX10Q13206 875 aaKnown RBP17.03■□□□□ 0.32
CHRNA3-208ENST00000561128 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
CHRNA3-208ENST00000561128 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
CHRNA3-208ENST00000561128 CNTNAP4Q9C0A0 1308 aa17.02■□□□□ 0.32
CHRNA3-208ENST00000561128 SSFA2P28290 1259 aa17.02■□□□□ 0.32
CHRNA3-208ENST00000561128 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
CHRNA3-208ENST00000561128 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
CHRNA3-208ENST00000561128 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
CHRNA3-208ENST00000561128 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
CHRNA3-208ENST00000561128 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
CHRNA3-208ENST00000561128 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
CHRNA3-208ENST00000561128 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
CHRNA3-208ENST00000561128 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
CHRNA3-208ENST00000561128 POLD1P28340 1107 aa16.99■□□□□ 0.31
CHRNA3-208ENST00000561128 KCNQ3O43525 872 aa16.98■□□□□ 0.31
CHRNA3-208ENST00000561128 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
CHRNA3-208ENST00000561128 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
CHRNA3-208ENST00000561128 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
CHRNA3-208ENST00000561128 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
CHRNA3-208ENST00000561128 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
CHRNA3-208ENST00000561128 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
CHRNA3-208ENST00000561128 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
CHRNA3-208ENST00000561128 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
CHRNA3-208ENST00000561128 RPS6KA4O75676 772 aa16.96■□□□□ 0.31
CHRNA3-208ENST00000561128 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
CHRNA3-208ENST00000561128 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
CHRNA3-208ENST00000561128 MCM10Q7L590 875 aa16.95■□□□□ 0.3
CHRNA3-208ENST00000561128 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
CHRNA3-208ENST00000561128 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
CHRNA3-208ENST00000561128 KIF13BQ9NQT8 1826 aa16.95■□□□□ 0.3
CHRNA3-208ENST00000561128 GYS1P13807 737 aa16.94■□□□□ 0.3
CHRNA3-208ENST00000561128 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
CHRNA3-208ENST00000561128 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
CHRNA3-208ENST00000561128 SOS1Q07889 1333 aaPredicted RBP16.94■□□□□ 0.3
CHRNA3-208ENST00000561128 FCHSD2O94868 740 aa16.93■□□□□ 0.3
CHRNA3-208ENST00000561128 MMP10P09238 476 aa16.93■□□□□ 0.3
CHRNA3-208ENST00000561128 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHRNA3-208ENST00000561128 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
CHRNA3-208ENST00000561128 SCN7AQ01118 1682 aa16.93■□□□□ 0.3
CHRNA3-208ENST00000561128 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
CHRNA3-208ENST00000561128 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-208ENST00000561128 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
CHRNA3-208ENST00000561128 C10orf71Q711Q0 1435 aa16.92■□□□□ 0.3
CHRNA3-208ENST00000561128 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-208ENST00000561128 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
CHRNA3-208ENST00000561128 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
CHRNA3-208ENST00000561128 PRAMEF22A3QJZ6 481 aa16.91■□□□□ 0.3
CHRNA3-208ENST00000561128 TEFQ10587 303 aa16.91■□□□□ 0.3
CHRNA3-208ENST00000561128 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
CHRNA3-208ENST00000561128 ZNF790Q6PG37 636 aa16.91■□□□□ 0.3
CHRNA3-208ENST00000561128 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
CHRNA3-208ENST00000561128 COL15A1P39059 1388 aa16.9■□□□□ 0.3
CHRNA3-208ENST00000561128 ADRA2BP18089 450 aa16.9■□□□□ 0.3
CHRNA3-208ENST00000561128 DDR1Q08345 913 aa16.9■□□□□ 0.3
CHRNA3-208ENST00000561128 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CHRNA3-208ENST00000561128 YY1P25490 414 aa16.89■□□□□ 0.29
CHRNA3-208ENST00000561128 RALBP1Q15311 655 aa16.89■□□□□ 0.29
CHRNA3-208ENST00000561128 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
CHRNA3-208ENST00000561128 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
CHRNA3-208ENST00000561128 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
CHRNA3-208ENST00000561128 BCORQ6W2J9 1755 aa16.88■□□□□ 0.29
CHRNA3-208ENST00000561128 RFC4P35249 363 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms