RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CHRDL2Q6WN34 429 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 CCDC146Q8IYE0 955 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 ABTB2Q8N961 1025 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 CHMP7Q8WUX9 453 aaPredicted RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 SRPK1Q96SB4 655 aaKnown RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 PIF1Q9H611 641 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 IFT57Q9NWB7 429 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 CHPF2Q9P2E5 772 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 FAM198AQ9UFP1 575 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 GGT7Q9UJ14 662 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 G3BP2Q9UN86 482 aaKnown RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 SUGT1Q9Y2Z0 365 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 TBX22Q9Y458 520 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 MRPL42Q9Y6G3 142 aaKnown RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 PNMA6FA0A0J9YX94 578 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 BACH1O14867 736 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 FOXO3O43524 673 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 GALR2O43603 387 aaPredicted RBP2.72□□□□□ -1.97
RTF1-207ENST00000561076 PLIN1O60240 522 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 SLC10A3P09131 477 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 XRCC5P13010 732 aaKnown RBP2.72□□□□□ -1.97
RTF1-207ENST00000561076 COL9A1P20849 921 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 PTMSP20962 102 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 MPSTP25325 297 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 GNA15P30679 374 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 USP5P45974 858 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 TCEAL1Q15170 157 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 ENOX2Q16206 610 aaKnown RBP2.72□□□□□ -1.97
RTF1-207ENST00000561076 OCLNQ16625 522 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 DOK7Q18PE1 504 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 NBPF20Q3BBV1 942 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 HSP90AB4PQ58FF6 505 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 METTL16Q86W50 562 aaKnown RBP2.72□□□□□ -1.97
RTF1-207ENST00000561076 CPLX3Q8WVH0 158 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 COL26A1Q96A83 441 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 CRELD1Q96HD1 420 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 GPATCH3Q96I76 525 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 GMLQ99445 158 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 USB1Q9BQ65 265 aaKnown RBP2.72□□□□□ -1.97
RTF1-207ENST00000561076 PRR14Q9BWN1 585 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 NIF3L1Q9GZT8 377 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 NEUROD4Q9HD90 331 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 PCDH12Q9NPG4 1184 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 DMGDHQ9UI17 866 aaKnown RBP2.72□□□□□ -1.97
RTF1-207ENST00000561076 PRKAB1Q9Y478 270 aa2.72□□□□□ -1.97
RTF1-207ENST00000561076 ERBB3P21860 1342 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 MAGEB6P1A0A0J9YX57 407 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 CCDC194A0A1B0GVG4 234 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 ZBTB7BO15156 539 aaPredicted RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 ZBTB24O43167 697 aaPredicted RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 ATMINO43313 823 aaPredicted RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 PRC1O43663 620 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 SH3BP5O60239 455 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 PARNO95453 639 aaKnown RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 MAP4K4O95819 1239 aaPredicted RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 IFRD2Q12894 506 aaPredicted RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 FKBP5Q13451 457 aaPredicted RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 BIRC2Q13490 618 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 SAFB2Q14151 953 aaKnown RBP eCLIP2.71□□□□□ -1.98
RTF1-207ENST00000561076 PTPRNQ16849 979 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 NBPF6Q5VWK0 638 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 C16orf46Q6P387 395 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 PHTF2Q8N3S3 785 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 TSEN2Q8NCE0 465 aaKnown RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 ADAM32Q8TC27 787 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 SCG3Q8WXD2 468 aaKnown RBP2.71□□□□□ -1.98
RTF1-207ENST00000561076 JDP2Q8WYK2 163 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 GPRASP2Q96D09 838 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 SLC10A4Q96EP9 437 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 NBPF4Q96M43 638 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 SPOCK3Q9BQ16 436 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 CARD14Q9BXL6 1004 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 UBA5Q9GZZ9 404 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 PRDM16Q9HAZ2 1276 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 BCL2L12Q9HB09 334 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 SIRPGQ9P1W8 387 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 KIAA1468Q9P260 1216 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 MAP10Q9P2G4 905 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 KIAA1024Q9UPX6 916 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 PCDHB11Q9Y5F2 797 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 PCDHGB7Q9Y5F8 929 aa2.71□□□□□ -1.98
RTF1-207ENST00000561076 CCDC85CA6NKD9 419 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 M0R2N6 131 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 PPP1R12BO60237 982 aaPredicted RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 CDC45O75419 566 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 JUNDP17535 347 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 IGFBP4P22692 258 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 CNGA1P29973 690 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 WEE1P30291 646 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 EIF1AXP47813 144 aaKnown RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 SETQ01105 290 aaPredicted RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 NFX1Q12986 1120 aaKnown RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 HDAC1Q13547 482 aaPredicted RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 RALBP1Q15311 655 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 PUS10Q3MIT2 529 aaKnown RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 ZNF394Q53GI3 561 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 ARSIQ5FYB1 569 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 DIEXFQ68CQ4 756 aaKnown RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 PPP4R4Q6NUP7 873 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 TRAF7Q6Q0C0 670 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms