RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 BANK1Q8NDB2 785 aa9.63□□□□□ -0.87
PSMA4-221ENST00000560842 GDF2Q9UK05 429 aaPredicted RBP9.63□□□□□ -0.87
PSMA4-221ENST00000560842 FURINP09958 794 aa9.62□□□□□ -0.87
PSMA4-221ENST00000560842 FBXO45P0C2W1 286 aa9.62□□□□□ -0.87
PSMA4-221ENST00000560842 SCTRP47872 440 aa9.62□□□□□ -0.87
PSMA4-221ENST00000560842 EDARADDQ8WWZ3 215 aa9.62□□□□□ -0.87
PSMA4-221ENST00000560842 PHF24Q9UPV7 400 aa9.62□□□□□ -0.87
PSMA4-221ENST00000560842 SOCS7O14512 581 aa9.61□□□□□ -0.87
PSMA4-221ENST00000560842 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
PSMA4-221ENST00000560842 OSBPL3Q9H4L5 887 aa9.61□□□□□ -0.87
PSMA4-221ENST00000560842 ARHGEF10LQ9HCE6 1279 aa9.61□□□□□ -0.87
PSMA4-221ENST00000560842 RRAGCQ9HB90 399 aa9.6□□□□□ -0.87
PSMA4-221ENST00000560842 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
PSMA4-221ENST00000560842 LINC00114Q6XXX2 140 aa9.59□□□□□ -0.87
PSMA4-221ENST00000560842 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
PSMA4-221ENST00000560842 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
PSMA4-221ENST00000560842 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
PSMA4-221ENST00000560842 ESYT1Q9BSJ8 1104 aa9.58□□□□□ -0.88
PSMA4-221ENST00000560842 GPAMQ9HCL2 828 aa9.58□□□□□ -0.88
PSMA4-221ENST00000560842 PCDHB11Q9Y5F2 797 aa9.58□□□□□ -0.88
PSMA4-221ENST00000560842 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
PSMA4-221ENST00000560842 GNRH1P01148 92 aa9.57□□□□□ -0.88
PSMA4-221ENST00000560842 CENPCQ03188 943 aa9.57□□□□□ -0.88
PSMA4-221ENST00000560842 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
PSMA4-221ENST00000560842 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
PSMA4-221ENST00000560842 ESF1Q9H501 851 aaKnown RBP9.57□□□□□ -0.88
PSMA4-221ENST00000560842 GRIN2CQ14957 1233 aa9.56□□□□□ -0.88
PSMA4-221ENST00000560842 SUV39H2Q9H5I1 410 aa9.56□□□□□ -0.88
PSMA4-221ENST00000560842 IL2RAP01589 272 aa9.55□□□□□ -0.88
PSMA4-221ENST00000560842 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
PSMA4-221ENST00000560842 RAB6BQ9NRW1 208 aa9.55□□□□□ -0.88
PSMA4-221ENST00000560842 HRH3Q9Y5N1 445 aa9.55□□□□□ -0.88
PSMA4-221ENST00000560842 PIK3R2O00459 728 aa9.54□□□□□ -0.88
PSMA4-221ENST00000560842 C2CD2LO14523 706 aa9.54□□□□□ -0.88
PSMA4-221ENST00000560842 PHKA2P46019 1235 aa9.54□□□□□ -0.88
PSMA4-221ENST00000560842 NR1H3Q13133 447 aa9.54□□□□□ -0.88
PSMA4-221ENST00000560842 ZSCAN10Q96SZ4 725 aaPredicted RBP9.54□□□□□ -0.88
PSMA4-221ENST00000560842 ATXN7L1Q9ULK2 861 aaPredicted RBP9.54□□□□□ -0.88
PSMA4-221ENST00000560842 C1QTNF9BB2RNN3 333 aa9.53□□□□□ -0.88
PSMA4-221ENST00000560842 BMP4P12644 408 aa9.53□□□□□ -0.88
PSMA4-221ENST00000560842 SLCO4C1Q6ZQN7 724 aa9.53□□□□□ -0.88
PSMA4-221ENST00000560842 XAGE2Q96GT9 111 aa9.53□□□□□ -0.88
PSMA4-221ENST00000560842 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
PSMA4-221ENST00000560842 GNB5O14775 395 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 CSB-PGBD3P0DP91 1061 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 AMPD1P23109 780 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 PGBD3Q8N328 593 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 MTMR14Q8NCE2 650 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 BTBD6Q96KE9 485 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 GGA1Q9UJY5 639 aa9.52□□□□□ -0.89
PSMA4-221ENST00000560842 CD163Q86VB7 1156 aa9.51□□□□□ -0.89
PSMA4-221ENST00000560842 FHDC1Q9C0D6 1143 aaPredicted RBP9.51□□□□□ -0.89
PSMA4-221ENST00000560842 RUBCNLQ9H714 662 aa9.51□□□□□ -0.89
PSMA4-221ENST00000560842 SNRKQ9NRH2 765 aa9.51□□□□□ -0.89
PSMA4-221ENST00000560842 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
PSMA4-221ENST00000560842 MSX1P28360 303 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 CTBSQ01459 385 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 FLIIQ13045 1269 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 MCM6Q14566 821 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 C4orf17Q53FE4 359 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 EFHC2Q5JST6 749 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 GNASQ5JWF2 1037 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 GTF3C3Q9Y5Q9 886 aa9.5□□□□□ -0.89
PSMA4-221ENST00000560842 BNIP3LO60238 219 aa9.49□□□□□ -0.89
PSMA4-221ENST00000560842 EPXP11678 715 aa9.49□□□□□ -0.89
PSMA4-221ENST00000560842 FGFR3P22607 806 aa9.49□□□□□ -0.89
PSMA4-221ENST00000560842 GTF2E1P29083 439 aaPredicted RBP9.49□□□□□ -0.89
PSMA4-221ENST00000560842 TMEM214Q6NUQ4 689 aaKnown RBP9.49□□□□□ -0.89
PSMA4-221ENST00000560842 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
PSMA4-221ENST00000560842 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.48□□□□□ -0.89
PSMA4-221ENST00000560842 DGKGP49619 791 aa9.48□□□□□ -0.89
PSMA4-221ENST00000560842 KRTAP9-2Q9BYQ4 174 aa9.48□□□□□ -0.89
PSMA4-221ENST00000560842 ARAFP10398 606 aa9.47□□□□□ -0.89
PSMA4-221ENST00000560842 ITGB7P26010 798 aa9.47□□□□□ -0.89
PSMA4-221ENST00000560842 CHRNA4P43681 627 aa9.47□□□□□ -0.89
PSMA4-221ENST00000560842 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
PSMA4-221ENST00000560842 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
PSMA4-221ENST00000560842 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
PSMA4-221ENST00000560842 CDCA7Q9BWT1 371 aaPredicted RBP9.46□□□□□ -0.9
PSMA4-221ENST00000560842 GPR37L1O60883 481 aa9.45□□□□□ -0.9
PSMA4-221ENST00000560842 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
PSMA4-221ENST00000560842 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
PSMA4-221ENST00000560842 APBB1O00213 710 aa9.44□□□□□ -0.9
PSMA4-221ENST00000560842 RHBDD1Q8TEB9 315 aa9.44□□□□□ -0.9
PSMA4-221ENST00000560842 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
PSMA4-221ENST00000560842 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
PSMA4-221ENST00000560842 NEURL1BA8MQ27 555 aa9.43□□□□□ -0.9
PSMA4-221ENST00000560842 PPARGC1BQ86YN6 1023 aaKnown RBP9.43□□□□□ -0.9
PSMA4-221ENST00000560842 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
PSMA4-221ENST00000560842 FIGNL1Q6PIW4 674 aa9.42□□□□□ -0.9
PSMA4-221ENST00000560842 SEMA6BQ9H3T3 888 aa9.42□□□□□ -0.9
PSMA4-221ENST00000560842 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
PSMA4-221ENST00000560842 DOC2BQ14184 412 aa9.41□□□□□ -0.9
PSMA4-221ENST00000560842 CHSY3Q70JA7 882 aa9.41□□□□□ -0.9
PSMA4-221ENST00000560842 ZCCHC2Q9C0B9 1178 aaKnown RBP9.41□□□□□ -0.9
PSMA4-221ENST00000560842 PCDHGC4Q9Y5F7 938 aa9.41□□□□□ -0.9
PSMA4-221ENST00000560842 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
PSMA4-221ENST00000560842 NLRP8Q86W28 1048 aa9.39□□□□□ -0.91
PSMA4-221ENST00000560842 KLF15Q9UIH9 416 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms