RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 TAF1LQ8IZX4 1826 aa22.86■■□□□ 1.25
CPNE6-217ENST00000560828 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
CPNE6-217ENST00000560828 LINC00116Q8NCU8 138 aa22.85■■□□□ 1.25
CPNE6-217ENST00000560828 SSFA2P28290 1259 aa22.84■■□□□ 1.25
CPNE6-217ENST00000560828 ITPK1Q13572 414 aa22.84■■□□□ 1.25
CPNE6-217ENST00000560828 CABP4P57796 275 aa22.83■■□□□ 1.25
CPNE6-217ENST00000560828 MSL1Q68DK7 614 aa22.83■■□□□ 1.25
CPNE6-217ENST00000560828 AMIGO3Q86WK7 504 aa22.83■■□□□ 1.25
CPNE6-217ENST00000560828 KLHL34Q8N239 644 aa22.83■■□□□ 1.25
CPNE6-217ENST00000560828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.82■■□□□ 1.24
CPNE6-217ENST00000560828 DIAPH1O60610 1272 aaKnown RBP22.81■■□□□ 1.24
CPNE6-217ENST00000560828 PHF14O94880 888 aa22.81■■□□□ 1.24
CPNE6-217ENST00000560828 GNPATO15228 680 aa22.79■■□□□ 1.24
CPNE6-217ENST00000560828 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
CPNE6-217ENST00000560828 ZNF784Q8NCA9 323 aaPredicted RBP22.79■■□□□ 1.24
CPNE6-217ENST00000560828 ZNF831Q5JPB2 1677 aa22.78■■□□□ 1.24
CPNE6-217ENST00000560828 HMOX1P09601 288 aa22.78■■□□□ 1.24
CPNE6-217ENST00000560828 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
CPNE6-217ENST00000560828 SLC4A9Q96Q91 983 aa22.78■■□□□ 1.24
CPNE6-217ENST00000560828 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
CPNE6-217ENST00000560828 UBR3Q6ZT12 1888 aa22.77■■□□□ 1.24
CPNE6-217ENST00000560828 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
CPNE6-217ENST00000560828 COL3A1P02461 1466 aaPredicted RBP22.77■■□□□ 1.24
CPNE6-217ENST00000560828 GPR162Q16538 588 aa22.76■■□□□ 1.23
CPNE6-217ENST00000560828 SMIM5Q71RC9 77 aa22.76■■□□□ 1.23
CPNE6-217ENST00000560828 CNTNAP4Q9C0A0 1308 aa22.75■■□□□ 1.23
CPNE6-217ENST00000560828 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
CPNE6-217ENST00000560828 RC3H1Q5TC82 1133 aaKnown RBP22.74■■□□□ 1.23
CPNE6-217ENST00000560828 CD2APQ9Y5K6 639 aa22.74■■□□□ 1.23
CPNE6-217ENST00000560828 RTCBQ9Y3I0 505 aaKnown RBP22.73■■□□□ 1.23
CPNE6-217ENST00000560828 PTCD1O75127 700 aaKnown RBP22.72■■□□□ 1.23
CPNE6-217ENST00000560828 ADRA2BP18089 450 aa22.72■■□□□ 1.23
CPNE6-217ENST00000560828 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
CPNE6-217ENST00000560828 MRC1P22897 1456 aa22.72■■□□□ 1.23
CPNE6-217ENST00000560828 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
CPNE6-217ENST00000560828 TRAPPC3LQ5T215 181 aa22.71■■□□□ 1.23
CPNE6-217ENST00000560828 GOLGB1Q14789 3259 aaKnown RBP22.7■■□□□ 1.22
CPNE6-217ENST00000560828 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
CPNE6-217ENST00000560828 U2SURPO15042 1029 aaKnown RBP22.69■■□□□ 1.22
CPNE6-217ENST00000560828 RNMTO43148 476 aaKnown RBP22.69■■□□□ 1.22
CPNE6-217ENST00000560828 LGR6Q9HBX8 967 aa22.69■■□□□ 1.22
CPNE6-217ENST00000560828 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
CPNE6-217ENST00000560828 RPS6KA4O75676 772 aa22.68■■□□□ 1.22
CPNE6-217ENST00000560828 CFAP53Q96M91 514 aa22.68■■□□□ 1.22
CPNE6-217ENST00000560828 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
CPNE6-217ENST00000560828 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
CPNE6-217ENST00000560828 ADAMTS7Q9UKP4 1686 aa22.66■■□□□ 1.22
CPNE6-217ENST00000560828 GRIN3BO60391 1043 aa22.66■■□□□ 1.22
CPNE6-217ENST00000560828 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
CPNE6-217ENST00000560828 ARHGEF1Q92888 912 aaKnown RBP22.66■■□□□ 1.22
CPNE6-217ENST00000560828 YBX3P16989 372 aaKnown RBP eCLIP22.65■■□□□ 1.22
CPNE6-217ENST00000560828 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
CPNE6-217ENST00000560828 MMP10P09238 476 aa22.64■■□□□ 1.21
CPNE6-217ENST00000560828 RFC4P35249 363 aa22.64■■□□□ 1.21
CPNE6-217ENST00000560828 GAS2L2Q8NHY3 880 aa22.64■■□□□ 1.21
CPNE6-217ENST00000560828 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
CPNE6-217ENST00000560828 GYS1P13807 737 aa22.62■■□□□ 1.21
CPNE6-217ENST00000560828 TJP1Q07157 1748 aa22.62■■□□□ 1.21
CPNE6-217ENST00000560828 NUDCQ9Y266 331 aa22.61■■□□□ 1.21
CPNE6-217ENST00000560828 KCPQ6ZWJ8 1503 aa22.61■■□□□ 1.21
CPNE6-217ENST00000560828 GNAT3A8MTJ3 354 aa22.6■■□□□ 1.21
CPNE6-217ENST00000560828 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
CPNE6-217ENST00000560828 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
CPNE6-217ENST00000560828 INTS5Q6P9B9 1019 aaKnown RBP22.6■■□□□ 1.21
CPNE6-217ENST00000560828 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
CPNE6-217ENST00000560828 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
CPNE6-217ENST00000560828 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
CPNE6-217ENST00000560828 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
CPNE6-217ENST00000560828 PRKAR2BP31323 418 aa22.58■■□□□ 1.21
CPNE6-217ENST00000560828 USP42Q9H9J4 1324 aaKnown RBP22.57■■□□□ 1.2
CPNE6-217ENST00000560828 CYP19A1P11511 503 aaPredicted RBP22.57■■□□□ 1.2
CPNE6-217ENST00000560828 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
CPNE6-217ENST00000560828 SENP3-EIF4A1A0A087X0R7 540 aa22.56■■□□□ 1.2
CPNE6-217ENST00000560828 TEFQ10587 303 aa22.56■■□□□ 1.2
CPNE6-217ENST00000560828 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
CPNE6-217ENST00000560828 PHACTR3Q96KR7 559 aa22.56■■□□□ 1.2
CPNE6-217ENST00000560828 C4AP0C0L4 1744 aa22.56■■□□□ 1.2
CPNE6-217ENST00000560828 C10orf71Q711Q0 1435 aa22.56■■□□□ 1.2
CPNE6-217ENST00000560828 MYH14Q7Z406 1995 aaKnown RBP22.56■■□□□ 1.2
CPNE6-217ENST00000560828 CEMIPQ8WUJ3 1361 aa22.55■■□□□ 1.2
CPNE6-217ENST00000560828 PARP3Q9Y6F1 533 aa22.55■■□□□ 1.2
CPNE6-217ENST00000560828 SOS1Q07889 1333 aaPredicted RBP22.55■■□□□ 1.2
CPNE6-217ENST00000560828 U2AF1L5P0DN76 240 aaPredicted RBP22.54■■□□□ 1.2
CPNE6-217ENST00000560828 TGFB2P61812 414 aa22.54■■□□□ 1.2
CPNE6-217ENST00000560828 U2AF1Q01081 240 aaKnown RBP eCLIP22.54■■□□□ 1.2
CPNE6-217ENST00000560828 SRP68Q9UHB9 627 aaKnown RBP22.54■■□□□ 1.2
CPNE6-217ENST00000560828 PXDNLA1KZ92 1463 aa22.54■■□□□ 1.2
CPNE6-217ENST00000560828 FCHSD2O94868 740 aa22.53■■□□□ 1.2
CPNE6-217ENST00000560828 FKBP8Q14318 412 aa22.52■■□□□ 1.2
CPNE6-217ENST00000560828 ZNF790Q6PG37 636 aa22.52■■□□□ 1.2
CPNE6-217ENST00000560828 UBR2Q8IWV8 1755 aa22.51■■□□□ 1.19
CPNE6-217ENST00000560828 COL15A1P39059 1388 aa22.5■■□□□ 1.19
CPNE6-217ENST00000560828 ZPR1O75312 459 aa22.5■■□□□ 1.19
CPNE6-217ENST00000560828 GIGYF1O75420 1035 aaPredicted RBP22.5■■□□□ 1.19
CPNE6-217ENST00000560828 STARD3NLO95772 234 aa22.5■■□□□ 1.19
CPNE6-217ENST00000560828 ZBTB1Q9Y2K1 713 aa22.5■■□□□ 1.19
CPNE6-217ENST00000560828 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
CPNE6-217ENST00000560828 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
CPNE6-217ENST00000560828 KIF13BQ9NQT8 1826 aa22.49■■□□□ 1.19
CPNE6-217ENST00000560828 HEG1Q9ULI3 1381 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms