RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 SHANK3Q9BYB0 1731 aa8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 ANKRD26Q9UPS8 1709 aa8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 CYP27B1O15528 508 aa8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 STK32BQ9NY57 414 aa8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 NCAPD2Q15021 1401 aa8.1□□□□□ -1.11
AP001007.3-201ENST00000560744 KCNQ4P56696 695 aa8.09□□□□□ -1.11
AP001007.3-201ENST00000560744 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
AP001007.3-201ENST00000560744 SPOCK2Q92563 424 aa8.09□□□□□ -1.11
AP001007.3-201ENST00000560744 PCDH11XQ9BZA7 1347 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 PCDH11YQ9BZA8 1340 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 PER1O15534 1290 aaPredicted RBP8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 NUBP1P53384 320 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 GSE1Q14687 1217 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 ZNF827Q17R98 1081 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 SPON1Q9HCB6 807 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 DOT1LQ8TEK3 1739 aa8.08□□□□□ -1.12
AP001007.3-201ENST00000560744 RNF123Q5XPI4 1314 aa8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 GABBR2O75899 941 aa8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 ZBTB7AO95365 584 aa8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 SLC27A3Q5K4L6 730 aa8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 CC2D1BQ5T0F9 858 aaKnown RBP8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 IFNLR1Q8IU57 520 aaPredicted RBP8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.12
AP001007.3-201ENST00000560744 IGSF1Q8N6C5 1336 aa8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 NKX1-1Q15270 411 aaPredicted RBP8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 MPRIPQ6WCQ1 1025 aa8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 CCNL1Q9UK58 526 aaPredicted RBP8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 CASZ1Q86V15 1759 aa8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 PKD1L3Q7Z443 1732 aa8.06□□□□□ -1.12
AP001007.3-201ENST00000560744 PAPPAQ13219 1627 aa8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 PHKG2P15735 406 aa8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 IL13P35225 146 aa8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 MTHFSP49914 203 aa8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 CNGB1Q14028 1251 aaPredicted RBP8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 IFNL2Q8IZJ0 200 aa8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 PIGBQ92521 554 aa8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 PPP1R1BQ9UD71 204 aaPredicted RBP8.05□□□□□ -1.12
AP001007.3-201ENST00000560744 PTGER2P43116 358 aa8.04□□□□□ -1.12
AP001007.3-201ENST00000560744 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
AP001007.3-201ENST00000560744 PLEKHO1Q53GL0 409 aaPredicted RBP8.04□□□□□ -1.12
AP001007.3-201ENST00000560744 SULT6B1Q6IMI4 303 aa8.04□□□□□ -1.12
AP001007.3-201ENST00000560744 MTFR1LQ9H019 292 aa8.04□□□□□ -1.12
AP001007.3-201ENST00000560744 LY75O60449 1722 aa8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 TOGARAM1Q9Y4F4 1720 aa8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 PALLDQ8WX93 1383 aa8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 SMARCC1Q92922 1105 aaPredicted RBP8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 TFCP2L1Q9NZI6 479 aa8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 ITGB4P16144 1822 aa8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 PNPLA7Q6ZV29 1317 aa8.03□□□□□ -1.12
AP001007.3-201ENST00000560744 NPC1L1Q9UHC9 1359 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 NEFLP07196 543 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 AMOTQ4VCS5 1084 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 SGIP1Q9BQI5 828 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 TMOD3Q9NYL9 352 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 ASAP1Q9ULH1 1129 aa8.02□□□□□ -1.13
AP001007.3-201ENST00000560744 KDRP35968 1356 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 DIAPH1O60610 1272 aaKnown RBP8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 HSP90AB1P08238 724 aaKnown RBP8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 HMOX1P09601 288 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 RALBP1Q15311 655 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 COL23A1Q86Y22 540 aaPredicted RBP8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 SLC16A10Q8TF71 515 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 DCAF5Q96JK2 942 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 DCBLD2Q96PD2 775 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 PHF12Q96QT6 1004 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 ATG3Q9NT62 314 aa8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 MYBBP1AQ9BQG0 1328 aaKnown RBP8.01□□□□□ -1.13
AP001007.3-201ENST00000560744 LOC102724428A0A0B4J2F2 783 aa8□□□□□ -1.13
AP001007.3-201ENST00000560744 ERVV-2B6SEH9 535 aa8□□□□□ -1.13
AP001007.3-201ENST00000560744 SIK1P57059 783 aa8□□□□□ -1.13
AP001007.3-201ENST00000560744 C1orf141Q5JVX7 400 aa8□□□□□ -1.13
AP001007.3-201ENST00000560744 ARXQ96QS3 562 aa8□□□□□ -1.13
AP001007.3-201ENST00000560744 FHDC1Q9C0D6 1143 aaPredicted RBP8□□□□□ -1.13
AP001007.3-201ENST00000560744 CIZ1Q9ULV3 898 aaPredicted RBP8□□□□□ -1.13
AP001007.3-201ENST00000560744 KDM6AO15550 1401 aaPredicted RBP8□□□□□ -1.13
AP001007.3-201ENST00000560744 TUBGCP6Q96RT7 1819 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 CABP4P57796 275 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 ITPK1Q13572 414 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 QSER1Q2KHR3 1735 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 SMIM5Q71RC9 77 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 LINC00116Q8NCU8 138 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 SYT17Q9BSW7 474 aa7.99□□□□□ -1.13
AP001007.3-201ENST00000560744 U2SURPO15042 1029 aaKnown RBP7.98□□□□□ -1.13
AP001007.3-201ENST00000560744 HMGB2P26583 209 aaKnown RBP7.98□□□□□ -1.13
AP001007.3-201ENST00000560744 POLD1P28340 1107 aa7.98□□□□□ -1.13
AP001007.3-201ENST00000560744 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
AP001007.3-201ENST00000560744 NFATC2IPQ8NCF5 419 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms