RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
TSPAN3-209ENST00000560715 S100BP04271 92 aaPredicted RBP8.47□□□□□ -1.05
TSPAN3-209ENST00000560715 NCOA4Q13772 614 aa8.47□□□□□ -1.05
TSPAN3-209ENST00000560715 HSP90AB2PQ58FF8 381 aa8.47□□□□□ -1.05
TSPAN3-209ENST00000560715 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
TSPAN3-209ENST00000560715 GCC2Q8IWJ2 1684 aa8.46□□□□□ -1.05
TSPAN3-209ENST00000560715 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.05
TSPAN3-209ENST00000560715 EVA1CP58658 441 aa8.46□□□□□ -1.05
TSPAN3-209ENST00000560715 CCDC184Q52MB2 194 aa8.46□□□□□ -1.05
TSPAN3-209ENST00000560715 CHD1O14646 1710 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 EVI5O60447 810 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 SMC5Q8IY18 1101 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 ASB16Q96NS5 453 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 RPS6KC1Q96S38 1066 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 NAP1L2Q9ULW6 460 aaPredicted RBP8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 ADCY10Q96PN6 1610 aa8.46□□□□□ -1.06
TSPAN3-209ENST00000560715 PTK7Q13308 1070 aa8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 C11orf96Q7Z7L8 435 aa8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 LMOD3Q0VAK6 560 aa8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 BIRC2Q13490 618 aa8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 NAIPQ13075 1403 aa8.45□□□□□ -1.06
TSPAN3-209ENST00000560715 MAPK8P45983 427 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 RHBDL3P58872 404 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 ARHGAP4P98171 946 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 DPYDQ12882 1025 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 ECM1Q16610 540 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 TSHZ1Q6ZSZ6 1077 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 RPS6KL1Q9Y6S9 549 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 UACAQ9BZF9 1416 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 PDE3BQ13370 1112 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 WDR75Q8IWA0 830 aaKnown RBP8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 MPHOSPH6Q99547 160 aaKnown RBP8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 KANSL2Q9H9L4 492 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 ITSN2Q9NZM3 1697 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 ABCA8O94911 1581 aa8.44□□□□□ -1.06
TSPAN3-209ENST00000560715 ZNF746Q6NUN9 644 aaPredicted RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 FAM200AQ8TCP9 573 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 POGKQ9P215 609 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 PLB1Q6P1J6 1458 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 TROQ12816 1431 aaPredicted RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 MICALL2Q8IY33 904 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 SMAP1Q8IYB5 467 aaPredicted RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 KIF12Q96FN5 646 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 MRS2Q9HD23 443 aa8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 DDX56Q9NY93 547 aaKnown RBP8.43□□□□□ -1.06
TSPAN3-209ENST00000560715 PTGER2P43116 358 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 LONRF3Q496Y0 759 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 CCDC181Q5TID7 509 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 TTF2Q9UNY4 1162 aaKnown RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 DNMT1P26358 1616 aaKnown RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 APLP1P51693 650 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 RNF187Q5TA31 235 aaPredicted RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 STAC3Q96MF2 364 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 PCDHGC3Q9UN70 934 aa8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 DNMT3AQ9Y6K1 912 aaPredicted RBP8.42□□□□□ -1.06
TSPAN3-209ENST00000560715 ODR4Q5SWX8 454 aa8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 CLP1Q92989 425 aaKnown RBP8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 DCTN4Q9UJW0 460 aa8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 SHROOM2Q13796 1616 aa8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 MAP7D2Q96T17 732 aa8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 PRKRIP1Q9H875 184 aaPredicted RBP8.41□□□□□ -1.06
TSPAN3-209ENST00000560715 MCCD1P59942 119 aaPredicted RBP8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 AMPD3Q01432 767 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 DIXDC1Q155Q3 683 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 INPP5FQ9Y2H2 1132 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 ROCK1Q13464 1354 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 CNTLNQ9NXG0 1405 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 FAM196BA6NMK8 535 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 ICMTO60725 284 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 USP5P45974 858 aa8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 RACK1P63244 317 aaKnown RBP8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 CHMP4BQ9H444 224 aaKnown RBP8.4□□□□□ -1.06
TSPAN3-209ENST00000560715 PRG4Q92954 1404 aaPredicted RBP8.4□□□□□ -1.07
TSPAN3-209ENST00000560715 FSD2A1L4K1 749 aa8.4□□□□□ -1.07
TSPAN3-209ENST00000560715 MAP9Q49MG5 647 aa8.4□□□□□ -1.07
TSPAN3-209ENST00000560715 IER2Q9BTL4 223 aa8.4□□□□□ -1.07
TSPAN3-209ENST00000560715 VTI1BQ9UEU0 232 aa8.4□□□□□ -1.07
TSPAN3-209ENST00000560715 KIAA1024Q9UPX6 916 aa8.4□□□□□ -1.07
TSPAN3-209ENST00000560715 DAPK1P53355 1430 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 FBXO45P0C2W1 286 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 TMC7Q7Z402 723 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms