RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 HSP90AA1P07900 732 aaKnown RBP10.71□□□□□ -0.69
CCDC33-209ENST00000560565 ERBB3P21860 1342 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 AMPHP49418 695 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 DDB1Q16531 1140 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 CCDC27Q2M243 656 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 ANKRD24Q8TF21 1146 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 GBP4Q96PP9 640 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 NLRP2Q9NX02 1062 aa10.71□□□□□ -0.69
CCDC33-209ENST00000560565 FAM208AQ9UK61 1670 aaKnown RBP10.7□□□□□ -0.7
CCDC33-209ENST00000560565 MAP3K19Q56UN5 1328 aa10.7□□□□□ -0.7
CCDC33-209ENST00000560565 KIF16BQ96L93 1317 aa10.7□□□□□ -0.7
CCDC33-209ENST00000560565 HSCBQ8IWL3 235 aa10.7□□□□□ -0.7
CCDC33-209ENST00000560565 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
CCDC33-209ENST00000560565 TRIM44Q96DX7 344 aaPredicted RBP10.7□□□□□ -0.7
CCDC33-209ENST00000560565 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
CCDC33-209ENST00000560565 PARP4Q9UKK3 1724 aaKnown RBP10.7□□□□□ -0.7
CCDC33-209ENST00000560565 FLT4P35916 1363 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 CHD4Q14839 1912 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 GOLGA6L22H0YM25 854 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 TPM2P07951 284 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 HOXC9P31274 260 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 RRS1Q15050 365 aaKnown RBP10.69□□□□□ -0.7
CCDC33-209ENST00000560565 C20orf194Q5TEA3 1177 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 KAT6BQ8WYB5 2073 aa10.69□□□□□ -0.7
CCDC33-209ENST00000560565 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
CCDC33-209ENST00000560565 EXOC5O00471 708 aa10.68□□□□□ -0.7
CCDC33-209ENST00000560565 FCHSD2O94868 740 aa10.68□□□□□ -0.7
CCDC33-209ENST00000560565 TRIM37O94972 964 aa10.68□□□□□ -0.7
CCDC33-209ENST00000560565 U2AF1L5P0DN76 240 aaPredicted RBP10.68□□□□□ -0.7
CCDC33-209ENST00000560565 BAG6P46379 1132 aa10.68□□□□□ -0.7
CCDC33-209ENST00000560565 U2AF1Q01081 240 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC33-209ENST00000560565 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
CCDC33-209ENST00000560565 MCM4P33991 863 aa10.67□□□□□ -0.7
CCDC33-209ENST00000560565 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
CCDC33-209ENST00000560565 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
CCDC33-209ENST00000560565 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
CCDC33-209ENST00000560565 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
CCDC33-209ENST00000560565 IL2RBP14784 551 aa10.66□□□□□ -0.7
CCDC33-209ENST00000560565 IL13P35225 146 aa10.66□□□□□ -0.7
CCDC33-209ENST00000560565 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
CCDC33-209ENST00000560565 TERF1P54274 439 aa10.66□□□□□ -0.7
CCDC33-209ENST00000560565 MAP7D2Q96T17 732 aa10.66□□□□□ -0.7
CCDC33-209ENST00000560565 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
CCDC33-209ENST00000560565 RGPD2P0DJD1 1756 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
CCDC33-209ENST00000560565 APBA3O96018 575 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 HSP90AA2PQ14568 343 aaPredicted RBP10.65□□□□□ -0.7
CCDC33-209ENST00000560565 HSP90AB2PQ58FF8 381 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 MARCH10Q8NA82 808 aaPredicted RBP10.65□□□□□ -0.7
CCDC33-209ENST00000560565 ZNF428Q96B54 188 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 OVOS2A0A0G2JMS6 1433 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 DISP2A7MBM2 1401 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 LRRC37A3O60309 1634 aa10.65□□□□□ -0.7
CCDC33-209ENST00000560565 APAF1O14727 1248 aa10.64□□□□□ -0.71
CCDC33-209ENST00000560565 HSPA6P17066 643 aa10.64□□□□□ -0.71
CCDC33-209ENST00000560565 MTERF4Q7Z6M4 381 aaKnown RBP10.64□□□□□ -0.71
CCDC33-209ENST00000560565 SNX21Q969T3 373 aa10.64□□□□□ -0.71
CCDC33-209ENST00000560565 NAP1L5Q96NT1 182 aaPredicted RBP10.64□□□□□ -0.71
CCDC33-209ENST00000560565 CACNA1FO60840 1977 aa10.64□□□□□ -0.71
CCDC33-209ENST00000560565 SBF2Q86WG5 1849 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 IPO8O15397 1037 aaKnown RBP10.63□□□□□ -0.71
CCDC33-209ENST00000560565 HDAC1Q13547 482 aaPredicted RBP10.63□□□□□ -0.71
CCDC33-209ENST00000560565 NBPF6Q5VWK0 638 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 WWC1Q8IX03 1113 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 FTSJ3Q8IY81 847 aaKnown RBP10.63□□□□□ -0.71
CCDC33-209ENST00000560565 NBPF4Q96M43 638 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 C22orf23Q9BZE7 217 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 DDX19BQ9UMR2 479 aa10.63□□□□□ -0.71
CCDC33-209ENST00000560565 TNS1Q9HBL0 1735 aaKnown RBP10.63□□□□□ -0.71
CCDC33-209ENST00000560565 IBTKQ9P2D0 1353 aaPredicted RBP10.63□□□□□ -0.71
CCDC33-209ENST00000560565 TRAK2O60296 914 aa10.62□□□□□ -0.71
CCDC33-209ENST00000560565 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
CCDC33-209ENST00000560565 HS1BP3Q53T59 392 aa10.62□□□□□ -0.71
CCDC33-209ENST00000560565 ZKSCAN2Q63HK3 967 aa10.62□□□□□ -0.71
CCDC33-209ENST00000560565 CCDC146Q8IYE0 955 aa10.62□□□□□ -0.71
CCDC33-209ENST00000560565 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
CCDC33-209ENST00000560565 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
CCDC33-209ENST00000560565 KDRP35968 1356 aa10.62□□□□□ -0.71
CCDC33-209ENST00000560565 IL16Q14005 1332 aa10.61□□□□□ -0.71
CCDC33-209ENST00000560565 TNS2Q63HR2 1409 aa10.61□□□□□ -0.71
CCDC33-209ENST00000560565 RARSP54136 660 aaKnown RBP10.61□□□□□ -0.71
CCDC33-209ENST00000560565 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
CCDC33-209ENST00000560565 MVPQ14764 893 aaKnown RBP10.61□□□□□ -0.71
CCDC33-209ENST00000560565 EZH2Q15910 746 aaKnown RBP10.61□□□□□ -0.71
CCDC33-209ENST00000560565 DDX54Q8TDD1 881 aaKnown RBP10.61□□□□□ -0.71
CCDC33-209ENST00000560565 CAMKK2Q96RR4 588 aa10.61□□□□□ -0.71
CCDC33-209ENST00000560565 SLKQ9H2G2 1235 aaPredicted RBP10.61□□□□□ -0.71
CCDC33-209ENST00000560565 IGSF1Q8N6C5 1336 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 BCL9O00512 1426 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 IGHDP01880 384 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 LMOD3Q0VAK6 560 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 PLEKHG2Q9H7P9 1386 aa10.6□□□□□ -0.71
CCDC33-209ENST00000560565 NCAPD2Q15021 1401 aa10.59□□□□□ -0.71
CCDC33-209ENST00000560565 ESPNB1AK53 854 aa10.59□□□□□ -0.71
CCDC33-209ENST00000560565 BCAR3O75815 825 aa10.59□□□□□ -0.71
CCDC33-209ENST00000560565 XRCC6P12956 609 aaKnown RBP eCLIP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms