RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-217ENST00000560521 FYB1O15117 783 aa12.65□□□□□ -0.38
RABGGTA-217ENST00000560521 ITPK1Q13572 414 aa12.65□□□□□ -0.38
RABGGTA-217ENST00000560521 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-217ENST00000560521 INSRP06213 1382 aa12.65□□□□□ -0.38
RABGGTA-217ENST00000560521 ZNF831Q5JPB2 1677 aa12.64□□□□□ -0.39
RABGGTA-217ENST00000560521 GNPATO15228 680 aa12.64□□□□□ -0.39
RABGGTA-217ENST00000560521 GGNBP2Q9H3C7 697 aa12.64□□□□□ -0.39
RABGGTA-217ENST00000560521 DPEP1P16444 411 aa12.63□□□□□ -0.39
RABGGTA-217ENST00000560521 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
RABGGTA-217ENST00000560521 TESK2Q96S53 571 aa12.63□□□□□ -0.39
RABGGTA-217ENST00000560521 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
RABGGTA-217ENST00000560521 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 FCHSD2O94868 740 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 KCNA3P22001 575 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 PRELPP51888 382 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 FSTL1Q12841 308 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 C9orf131Q5VYM1 1079 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 TNS4Q8IZW8 715 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
RABGGTA-217ENST00000560521 FLT4P35916 1363 aa12.61□□□□□ -0.39
RABGGTA-217ENST00000560521 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-217ENST00000560521 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
RABGGTA-217ENST00000560521 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-217ENST00000560521 TMF1P82094 1093 aa12.6□□□□□ -0.39
RABGGTA-217ENST00000560521 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
RABGGTA-217ENST00000560521 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
RABGGTA-217ENST00000560521 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
RABGGTA-217ENST00000560521 TMOD3Q9NYL9 352 aa12.6□□□□□ -0.39
RABGGTA-217ENST00000560521 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 ST20-MTHFSA0A0A6YYL1 179 aa12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
RABGGTA-217ENST00000560521 DICER1Q9UPY3 1922 aaKnown RBP12.58□□□□□ -0.39
RABGGTA-217ENST00000560521 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-217ENST00000560521 GYS1P13807 737 aa12.58□□□□□ -0.4
RABGGTA-217ENST00000560521 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
RABGGTA-217ENST00000560521 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-217ENST00000560521 KDRP35968 1356 aa12.57□□□□□ -0.4
RABGGTA-217ENST00000560521 DCAF5Q96JK2 942 aa12.57□□□□□ -0.4
RABGGTA-217ENST00000560521 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
RABGGTA-217ENST00000560521 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
RABGGTA-217ENST00000560521 KDM2BQ8NHM5 1336 aa12.57□□□□□ -0.4
RABGGTA-217ENST00000560521 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 DLEC1Q9Y238 1755 aa12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 PHKG2P15735 406 aa12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 RNF181Q9P0P0 153 aa12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
RABGGTA-217ENST00000560521 ADAMTS7Q9UKP4 1686 aa12.55□□□□□ -0.4
RABGGTA-217ENST00000560521 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
RABGGTA-217ENST00000560521 EYA1Q99502 592 aa12.55□□□□□ -0.4
RABGGTA-217ENST00000560521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.44e-7■□□□□ 10.5
RABGGTA-217ENST00000560521 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 HSPA1AP0DMV8 641 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 HSPA1BP0DMV9 641 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 ADRA2BP18089 450 aa12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 RFC4P35249 363 aa12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 TJP1Q07157 1748 aa12.54□□□□□ -0.4
RABGGTA-217ENST00000560521 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
RABGGTA-217ENST00000560521 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-217ENST00000560521 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
RABGGTA-217ENST00000560521 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-217ENST00000560521 CHRNA5P30532 468 aa12.52□□□□□ -0.41
RABGGTA-217ENST00000560521 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
RABGGTA-217ENST00000560521 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 DDR1Q08345 913 aa12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 FKBP8Q14318 412 aa12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 CARD14Q9BXL6 1004 aa12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 SRP68Q9UHB9 627 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
RABGGTA-217ENST00000560521 ERVV-2B6SEH9 535 aa12.5□□□□□ -0.41
RABGGTA-217ENST00000560521 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-217ENST00000560521 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
RABGGTA-217ENST00000560521 RASSF7Q02833 373 aa12.49□□□□□ -0.41
RABGGTA-217ENST00000560521 USP42Q9H9J4 1324 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-217ENST00000560521 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-217ENST00000560521 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
RABGGTA-217ENST00000560521 VEGFAP15692 232 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-217ENST00000560521 TM4SF1P30408 202 aa12.48□□□□□ -0.41
RABGGTA-217ENST00000560521 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
RABGGTA-217ENST00000560521 POTECB2RU33 542 aa12.47□□□□□ -0.41
RABGGTA-217ENST00000560521 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-217ENST00000560521 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-217ENST00000560521 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
RABGGTA-217ENST00000560521 LMNB1P20700 586 aa12.46□□□□□ -0.41
RABGGTA-217ENST00000560521 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-217ENST00000560521 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-217ENST00000560521 CABP4P57796 275 aa12.45□□□□□ -0.42
RABGGTA-217ENST00000560521 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-217ENST00000560521 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-217ENST00000560521 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms