RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
CDC42BPB-207ENST00000560492 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
CDC42BPB-207ENST00000560492 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
CDC42BPB-207ENST00000560492 TMOD3Q9NYL9 352 aa14.58□□□□□ -0.08
CDC42BPB-207ENST00000560492 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
CDC42BPB-207ENST00000560492 GNPATO15228 680 aa14.57□□□□□ -0.08
CDC42BPB-207ENST00000560492 PIGBQ92521 554 aa14.57□□□□□ -0.08
CDC42BPB-207ENST00000560492 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
CDC42BPB-207ENST00000560492 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
CDC42BPB-207ENST00000560492 SSFA2P28290 1259 aa14.56□□□□□ -0.08
CDC42BPB-207ENST00000560492 SIK1P57059 783 aa14.56□□□□□ -0.08
CDC42BPB-207ENST00000560492 AMIGO3Q86WK7 504 aa14.56□□□□□ -0.08
CDC42BPB-207ENST00000560492 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
CDC42BPB-207ENST00000560492 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
CDC42BPB-207ENST00000560492 HSPA6P17066 643 aa14.55□□□□□ -0.08
CDC42BPB-207ENST00000560492 ATP6V1AP38606 617 aa14.55□□□□□ -0.08
CDC42BPB-207ENST00000560492 LINC00116Q8NCU8 138 aa14.55□□□□□ -0.08
CDC42BPB-207ENST00000560492 POLR3GLQ9BT43 218 aa14.55□□□□□ -0.08
CDC42BPB-207ENST00000560492 ADCY9O60503 1353 aa14.54□□□□□ -0.08
CDC42BPB-207ENST00000560492 ANKRD26Q9UPS8 1709 aa14.53□□□□□ -0.08
CDC42BPB-207ENST00000560492 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
CDC42BPB-207ENST00000560492 ASAP1Q9ULH1 1129 aa14.53□□□□□ -0.08
CDC42BPB-207ENST00000560492 MMP10P09238 476 aa14.52□□□□□ -0.09
CDC42BPB-207ENST00000560492 IFNL2Q8IZJ0 200 aa14.52□□□□□ -0.09
CDC42BPB-207ENST00000560492 TNNT2P45379 298 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPB-207ENST00000560492 BCS1LQ9Y276 419 aa14.51□□□□□ -0.09
CDC42BPB-207ENST00000560492 CICQ96RK0 1608 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPB-207ENST00000560492 ITPK1Q13572 414 aa14.5□□□□□ -0.09
CDC42BPB-207ENST00000560492 NKX1-1Q15270 411 aaPredicted RBP14.5□□□□□ -0.09
CDC42BPB-207ENST00000560492 EYA1Q99502 592 aa14.5□□□□□ -0.09
CDC42BPB-207ENST00000560492 CARD14Q9BXL6 1004 aa14.5□□□□□ -0.09
CDC42BPB-207ENST00000560492 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
CDC42BPB-207ENST00000560492 PHKG2P15735 406 aa14.49□□□□□ -0.09
CDC42BPB-207ENST00000560492 KIF13BQ9NQT8 1826 aa14.49□□□□□ -0.09
CDC42BPB-207ENST00000560492 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
CDC42BPB-207ENST00000560492 TRAPPC3LQ5T215 181 aa14.48□□□□□ -0.09
CDC42BPB-207ENST00000560492 ARHGAP27Q6ZUM4 889 aa14.48□□□□□ -0.09
CDC42BPB-207ENST00000560492 PXDNLA1KZ92 1463 aa14.47□□□□□ -0.09
CDC42BPB-207ENST00000560492 A0A0G2JLW4 131 aa14.47□□□□□ -0.09
CDC42BPB-207ENST00000560492 ATG3Q9NT62 314 aa14.47□□□□□ -0.09
CDC42BPB-207ENST00000560492 CCDC87Q9NVE4 849 aa14.47□□□□□ -0.09
CDC42BPB-207ENST00000560492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDC42BPB-207ENST00000560492 NCAPD2Q15021 1401 aa14.47□□□□□ -0.09
CDC42BPB-207ENST00000560492 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 KIAA1551Q9HCM1 1747 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 KIF3CO14782 793 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 FCHSD2O94868 740 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 RFC4P35249 363 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 NLGN1Q8N2Q7 840 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 PARP3Q9Y6F1 533 aa14.46□□□□□ -0.09
CDC42BPB-207ENST00000560492 COL5A3P25940 1745 aaPredicted RBP14.46□□□□□ -0.1
CDC42BPB-207ENST00000560492 TGFB2P61812 414 aa14.45□□□□□ -0.1
CDC42BPB-207ENST00000560492 C16orf71Q8IYS4 520 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-207ENST00000560492 POLKQ9UBT6 870 aa14.45□□□□□ -0.1
CDC42BPB-207ENST00000560492 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
CDC42BPB-207ENST00000560492 APLP1P51693 650 aa14.44□□□□□ -0.1
CDC42BPB-207ENST00000560492 CABP4P57796 275 aa14.44□□□□□ -0.1
CDC42BPB-207ENST00000560492 EIF4A2Q14240 407 aaKnown RBP14.44□□□□□ -0.1
CDC42BPB-207ENST00000560492 BRCA1P38398 1863 aaKnown RBP14.44□□□□□ -0.1
CDC42BPB-207ENST00000560492 C10orf71Q711Q0 1435 aa14.43□□□□□ -0.1
CDC42BPB-207ENST00000560492 DPEP1P16444 411 aa14.43□□□□□ -0.1
CDC42BPB-207ENST00000560492 ZNF530Q6P9A1 599 aaPredicted RBP14.43□□□□□ -0.1
CDC42BPB-207ENST00000560492 ARHGEF1Q92888 912 aaKnown RBP14.43□□□□□ -0.1
CDC42BPB-207ENST00000560492 ARFGEF1Q9Y6D6 1849 aa14.43□□□□□ -0.1
CDC42BPB-207ENST00000560492 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 TOMM70O94826 608 aa14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 PLEKHO1Q53GL0 409 aaPredicted RBP14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 NMRK2Q9NPI5 230 aa14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 KDRP35968 1356 aa14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 MYH14Q7Z406 1995 aaKnown RBP14.42□□□□□ -0.1
CDC42BPB-207ENST00000560492 WDR90Q96KV7 1748 aa14.41□□□□□ -0.1
CDC42BPB-207ENST00000560492 ERVV-2B6SEH9 535 aa14.41□□□□□ -0.1
CDC42BPB-207ENST00000560492 C1orf141Q5JVX7 400 aa14.41□□□□□ -0.1
CDC42BPB-207ENST00000560492 DCAF5Q96JK2 942 aa14.41□□□□□ -0.1
CDC42BPB-207ENST00000560492 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
CDC42BPB-207ENST00000560492 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
CDC42BPB-207ENST00000560492 GYS1P13807 737 aa14.4□□□□□ -0.1
CDC42BPB-207ENST00000560492 RC3H1Q5TC82 1133 aaKnown RBP14.4□□□□□ -0.1
CDC42BPB-207ENST00000560492 C9orf131Q5VYM1 1079 aa14.4□□□□□ -0.1
CDC42BPB-207ENST00000560492 MTHFSP49914 203 aa14.39□□□□□ -0.11
CDC42BPB-207ENST00000560492 SLC4A9Q96Q91 983 aa14.39□□□□□ -0.11
CDC42BPB-207ENST00000560492 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
CDC42BPB-207ENST00000560492 AMOTQ4VCS5 1084 aa14.38□□□□□ -0.11
CDC42BPB-207ENST00000560492 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
CDC42BPB-207ENST00000560492 PIM2Q9P1W9 311 aa14.38□□□□□ -0.11
CDC42BPB-207ENST00000560492 SRP68Q9UHB9 627 aaKnown RBP14.38□□□□□ -0.11
CDC42BPB-207ENST00000560492 CRKLP46109 303 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-207ENST00000560492 DALRD3Q5D0E6 543 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-207ENST00000560492 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-207ENST00000560492 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-207ENST00000560492 TJP1Q07157 1748 aa14.37□□□□□ -0.11
CDC42BPB-207ENST00000560492 KDM2BQ8NHM5 1336 aa14.37□□□□□ -0.11
CDC42BPB-207ENST00000560492 VIRMAQ69YN4 1812 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-207ENST00000560492 KCPQ6ZWJ8 1503 aa14.36□□□□□ -0.11
CDC42BPB-207ENST00000560492 SCN11AQ9UI33 1791 aa14.36□□□□□ -0.11
CDC42BPB-207ENST00000560492 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-207ENST00000560492 FKBP8Q14318 412 aa14.35□□□□□ -0.11
CDC42BPB-207ENST00000560492 MORC1Q86VD1 984 aa14.35□□□□□ -0.11
CDC42BPB-207ENST00000560492 NFATC2IPQ8NCF5 419 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms