RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
SMAD3-214ENST00000560402 LINC00116Q8NCU8 138 aa18.52■□□□□ 0.56
SMAD3-214ENST00000560402 DCAF5Q96JK2 942 aa18.52■□□□□ 0.56
SMAD3-214ENST00000560402 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
SMAD3-214ENST00000560402 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
SMAD3-214ENST00000560402 SCN11AQ9UI33 1791 aa18.51■□□□□ 0.55
SMAD3-214ENST00000560402 PHF14O94880 888 aa18.51■□□□□ 0.55
SMAD3-214ENST00000560402 ASAP1Q9ULH1 1129 aa18.51■□□□□ 0.55
SMAD3-214ENST00000560402 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
SMAD3-214ENST00000560402 KIF13BQ9NQT8 1826 aa18.5■□□□□ 0.55
SMAD3-214ENST00000560402 GNPATO15228 680 aa18.49■□□□□ 0.55
SMAD3-214ENST00000560402 ITPK1Q13572 414 aa18.49■□□□□ 0.55
SMAD3-214ENST00000560402 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
SMAD3-214ENST00000560402 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
SMAD3-214ENST00000560402 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
SMAD3-214ENST00000560402 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
SMAD3-214ENST00000560402 YBX3P16989 372 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMAD3-214ENST00000560402 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
SMAD3-214ENST00000560402 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
SMAD3-214ENST00000560402 CNTNAP4Q9C0A0 1308 aa18.47■□□□□ 0.55
SMAD3-214ENST00000560402 TJP1Q07157 1748 aa18.46■□□□□ 0.55
SMAD3-214ENST00000560402 ADRA2BP18089 450 aa18.45■□□□□ 0.54
SMAD3-214ENST00000560402 CABP4P57796 275 aa18.45■□□□□ 0.54
SMAD3-214ENST00000560402 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-214ENST00000560402 KIAA1551Q9HCM1 1747 aa18.44■□□□□ 0.54
SMAD3-214ENST00000560402 RC3H1Q5TC82 1133 aaKnown RBP18.44■□□□□ 0.54
SMAD3-214ENST00000560402 RTCBQ9Y3I0 505 aaKnown RBP18.44■□□□□ 0.54
SMAD3-214ENST00000560402 MRC1P22897 1456 aa18.44■□□□□ 0.54
SMAD3-214ENST00000560402 MYH14Q7Z406 1995 aaKnown RBP18.44■□□□□ 0.54
SMAD3-214ENST00000560402 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
SMAD3-214ENST00000560402 GIGYF1O75420 1035 aaPredicted RBP18.43■□□□□ 0.54
SMAD3-214ENST00000560402 MTHFSP49914 203 aa18.43■□□□□ 0.54
SMAD3-214ENST00000560402 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
SMAD3-214ENST00000560402 AEBP1Q8IUX7 1158 aa18.43■□□□□ 0.54
SMAD3-214ENST00000560402 RBM42Q9BTD8 480 aaKnown RBP18.43■□□□□ 0.54
SMAD3-214ENST00000560402 ADAMTS7Q9UKP4 1686 aa18.42■□□□□ 0.54
SMAD3-214ENST00000560402 IL13P35225 146 aa18.42■□□□□ 0.54
SMAD3-214ENST00000560402 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
SMAD3-214ENST00000560402 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
SMAD3-214ENST00000560402 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
SMAD3-214ENST00000560402 ADCY9O60503 1353 aa18.41■□□□□ 0.54
SMAD3-214ENST00000560402 C10orf71Q711Q0 1435 aa18.4■□□□□ 0.54
SMAD3-214ENST00000560402 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
SMAD3-214ENST00000560402 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
SMAD3-214ENST00000560402 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
SMAD3-214ENST00000560402 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.54
SMAD3-214ENST00000560402 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
SMAD3-214ENST00000560402 RPS6KA4O75676 772 aa18.39■□□□□ 0.53
SMAD3-214ENST00000560402 MMP10P09238 476 aa18.39■□□□□ 0.53
SMAD3-214ENST00000560402 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
SMAD3-214ENST00000560402 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
SMAD3-214ENST00000560402 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.53
SMAD3-214ENST00000560402 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
SMAD3-214ENST00000560402 RFC4P35249 363 aa18.36■□□□□ 0.53
SMAD3-214ENST00000560402 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
SMAD3-214ENST00000560402 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
SMAD3-214ENST00000560402 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
SMAD3-214ENST00000560402 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
SMAD3-214ENST00000560402 GYS1P13807 737 aa18.35■□□□□ 0.53
SMAD3-214ENST00000560402 TGFB2P61812 414 aa18.35■□□□□ 0.53
SMAD3-214ENST00000560402 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
SMAD3-214ENST00000560402 CCDC87Q9NVE4 849 aa18.35■□□□□ 0.53
SMAD3-214ENST00000560402 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
SMAD3-214ENST00000560402 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
SMAD3-214ENST00000560402 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
SMAD3-214ENST00000560402 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
SMAD3-214ENST00000560402 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
SMAD3-214ENST00000560402 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
SMAD3-214ENST00000560402 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
SMAD3-214ENST00000560402 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
SMAD3-214ENST00000560402 PARP3Q9Y6F1 533 aa18.32■□□□□ 0.52
SMAD3-214ENST00000560402 GPBP1L1Q9HC44 474 aaPredicted RBP18.31■□□□□ 0.52
SMAD3-214ENST00000560402 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
SMAD3-214ENST00000560402 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
SMAD3-214ENST00000560402 HMOX1P09601 288 aa18.3■□□□□ 0.52
SMAD3-214ENST00000560402 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
SMAD3-214ENST00000560402 WWC3Q9ULE0 1092 aa18.28■□□□□ 0.52
SMAD3-214ENST00000560402 NRXN2Q9P2S2 1712 aa18.27■□□□□ 0.52
SMAD3-214ENST00000560402 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.52
SMAD3-214ENST00000560402 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
SMAD3-214ENST00000560402 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
SMAD3-214ENST00000560402 INTS5Q6P9B9 1019 aaKnown RBP18.26■□□□□ 0.51
SMAD3-214ENST00000560402 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
SMAD3-214ENST00000560402 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
SMAD3-214ENST00000560402 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
SMAD3-214ENST00000560402 DLEC1Q9Y238 1755 aa18.25■□□□□ 0.51
SMAD3-214ENST00000560402 CYP19A1P11511 503 aaPredicted RBP18.25■□□□□ 0.51
SMAD3-214ENST00000560402 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
SMAD3-214ENST00000560402 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
SMAD3-214ENST00000560402 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
SMAD3-214ENST00000560402 COL15A1P39059 1388 aa18.25■□□□□ 0.51
SMAD3-214ENST00000560402 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
SMAD3-214ENST00000560402 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
SMAD3-214ENST00000560402 ZPR1O75312 459 aa18.24■□□□□ 0.51
SMAD3-214ENST00000560402 FKBP8Q14318 412 aa18.24■□□□□ 0.51
SMAD3-214ENST00000560402 FCHSD2O94868 740 aa18.23■□□□□ 0.51
SMAD3-214ENST00000560402 DPEP1P16444 411 aa18.23■□□□□ 0.51
SMAD3-214ENST00000560402 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
SMAD3-214ENST00000560402 DDR1Q08345 913 aa18.22■□□□□ 0.51
SMAD3-214ENST00000560402 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms