RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 KIAA1551Q9HCM1 1747 aa23.2■■□□□ 1.3
HERC1-207ENST00000560316 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
HERC1-207ENST00000560316 ARHGAP27Q6ZUM4 889 aa23.2■■□□□ 1.3
HERC1-207ENST00000560316 TGFB2P61812 414 aa23.19■■□□□ 1.3
HERC1-207ENST00000560316 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
HERC1-207ENST00000560316 KIF13BQ9NQT8 1826 aa23.19■■□□□ 1.3
HERC1-207ENST00000560316 TRAPPC3LQ5T215 181 aa23.17■■□□□ 1.3
HERC1-207ENST00000560316 EYA1Q99502 592 aa23.17■■□□□ 1.3
HERC1-207ENST00000560316 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
HERC1-207ENST00000560316 PHKG2P15735 406 aa23.16■■□□□ 1.3
HERC1-207ENST00000560316 DPEP1P16444 411 aa23.16■■□□□ 1.3
HERC1-207ENST00000560316 CARD14Q9BXL6 1004 aa23.16■■□□□ 1.3
HERC1-207ENST00000560316 RTCBQ9Y3I0 505 aaKnown RBP23.16■■□□□ 1.3
HERC1-207ENST00000560316 FCHSD2O94868 740 aa23.15■■□□□ 1.3
HERC1-207ENST00000560316 IFNL2Q8IZJ0 200 aa23.15■■□□□ 1.3
HERC1-207ENST00000560316 NLGN1Q8N2Q7 840 aa23.15■■□□□ 1.3
HERC1-207ENST00000560316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.15■■□□□ 1.3
HERC1-207ENST00000560316 HTRA3P83110 453 aa23.14■■□□□ 1.29
HERC1-207ENST00000560316 SLC4A9Q96Q91 983 aa23.14■■□□□ 1.29
HERC1-207ENST00000560316 ARHGEF1Q92888 912 aaKnown RBP23.13■■□□□ 1.29
HERC1-207ENST00000560316 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
HERC1-207ENST00000560316 KDRP35968 1356 aa23.13■■□□□ 1.29
HERC1-207ENST00000560316 WASHC2AQ641Q2 1341 aa23.12■■□□□ 1.29
HERC1-207ENST00000560316 C9orf131Q5VYM1 1079 aa23.12■■□□□ 1.29
HERC1-207ENST00000560316 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
HERC1-207ENST00000560316 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
HERC1-207ENST00000560316 GYS1P13807 737 aa23.11■■□□□ 1.29
HERC1-207ENST00000560316 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
HERC1-207ENST00000560316 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
HERC1-207ENST00000560316 C4AP0C0L4 1744 aa23.1■■□□□ 1.29
HERC1-207ENST00000560316 KCNA3P22001 575 aa23.09■■□□□ 1.29
HERC1-207ENST00000560316 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
HERC1-207ENST00000560316 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.29
HERC1-207ENST00000560316 ADRA2BP18089 450 aa23.08■■□□□ 1.29
HERC1-207ENST00000560316 RFC4P35249 363 aa23.08■■□□□ 1.29
HERC1-207ENST00000560316 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
HERC1-207ENST00000560316 COL13A1Q5TAT6 717 aaPredicted RBP23.08■■□□□ 1.29
HERC1-207ENST00000560316 KLRG1Q96E93 195 aa23.08■■□□□ 1.29
HERC1-207ENST00000560316 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
HERC1-207ENST00000560316 RC3H1Q5TC82 1133 aaKnown RBP23.07■■□□□ 1.28
HERC1-207ENST00000560316 RPS6KA4O75676 772 aa23.06■■□□□ 1.28
HERC1-207ENST00000560316 POLKQ9UBT6 870 aa23.06■■□□□ 1.28
HERC1-207ENST00000560316 CNTNAP4Q9C0A0 1308 aa23.06■■□□□ 1.28
HERC1-207ENST00000560316 KCPQ6ZWJ8 1503 aa23.05■■□□□ 1.28
HERC1-207ENST00000560316 PLEKHG2Q9H7P9 1386 aa23.04■■□□□ 1.28
HERC1-207ENST00000560316 ERVV-2B6SEH9 535 aa23.04■■□□□ 1.28
HERC1-207ENST00000560316 EIF4A2Q14240 407 aaKnown RBP23.04■■□□□ 1.28
HERC1-207ENST00000560316 JMYQ8N9B5 988 aa23.04■■□□□ 1.28
HERC1-207ENST00000560316 PIM2Q9P1W9 311 aa23.04■■□□□ 1.28
HERC1-207ENST00000560316 COL5A3P25940 1745 aaPredicted RBP23.03■■□□□ 1.28
HERC1-207ENST00000560316 FSTL1Q12841 308 aa23.03■■□□□ 1.28
HERC1-207ENST00000560316 DCAF5Q96JK2 942 aa23.03■■□□□ 1.28
HERC1-207ENST00000560316 RNF181Q9P0P0 153 aa23.03■■□□□ 1.28
HERC1-207ENST00000560316 ZNF831Q5JPB2 1677 aa23.03■■□□□ 1.28
HERC1-207ENST00000560316 CAPN15O75808 1086 aa23.02■■□□□ 1.28
HERC1-207ENST00000560316 DALRD3Q5D0E6 543 aaKnown RBP23.02■■□□□ 1.28
HERC1-207ENST00000560316 RRAGCQ9HB90 399 aa23.02■■□□□ 1.28
HERC1-207ENST00000560316 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
HERC1-207ENST00000560316 ARFGEF1Q9Y6D6 1849 aa23.02■■□□□ 1.28
HERC1-207ENST00000560316 MYH14Q7Z406 1995 aaKnown RBP23.01■■□□□ 1.27
HERC1-207ENST00000560316 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
HERC1-207ENST00000560316 KDM2BQ8NHM5 1336 aa23.01■■□□□ 1.27
HERC1-207ENST00000560316 PTCD1O75127 700 aaKnown RBP22.99■■□□□ 1.27
HERC1-207ENST00000560316 CHRNA5P30532 468 aa22.99■■□□□ 1.27
HERC1-207ENST00000560316 CABP4P57796 275 aa22.99■■□□□ 1.27
HERC1-207ENST00000560316 DDR1Q08345 913 aa22.99■■□□□ 1.27
HERC1-207ENST00000560316 FKBP8Q14318 412 aa22.99■■□□□ 1.27
HERC1-207ENST00000560316 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
HERC1-207ENST00000560316 HSP90AB1P08238 724 aaKnown RBP22.98■■□□□ 1.27
HERC1-207ENST00000560316 CRKLP46109 303 aaKnown RBP22.97■■□□□ 1.27
HERC1-207ENST00000560316 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
HERC1-207ENST00000560316 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
HERC1-207ENST00000560316 USP42Q9H9J4 1324 aaKnown RBP22.96■■□□□ 1.27
HERC1-207ENST00000560316 TNS4Q8IZW8 715 aa22.95■■□□□ 1.26
HERC1-207ENST00000560316 PCNTO95613 3336 aa22.95■■□□□ 1.26
HERC1-207ENST00000560316 SMC1BQ8NDV3 1235 aa22.93■■□□□ 1.26
HERC1-207ENST00000560316 TNRC6CQ9HCJ0 1690 aaKnown RBP22.93■■□□□ 1.26
HERC1-207ENST00000560316 SBF1O95248 1867 aa22.92■■□□□ 1.26
HERC1-207ENST00000560316 POLRMTO00411 1230 aaKnown RBP22.92■■□□□ 1.26
HERC1-207ENST00000560316 MTHFSP49914 203 aa22.92■■□□□ 1.26
HERC1-207ENST00000560316 RASSF7Q02833 373 aa22.92■■□□□ 1.26
HERC1-207ENST00000560316 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
HERC1-207ENST00000560316 TM4SF1P30408 202 aa22.9■■□□□ 1.26
HERC1-207ENST00000560316 AMOTQ4VCS5 1084 aa22.9■■□□□ 1.26
HERC1-207ENST00000560316 INTS5Q6P9B9 1019 aaKnown RBP22.89■■□□□ 1.25
HERC1-207ENST00000560316 AEBP1Q8IUX7 1158 aa22.89■■□□□ 1.25
HERC1-207ENST00000560316 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
HERC1-207ENST00000560316 TJP1Q07157 1748 aa22.88■■□□□ 1.25
HERC1-207ENST00000560316 PRELPP51888 382 aa22.88■■□□□ 1.25
HERC1-207ENST00000560316 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
HERC1-207ENST00000560316 USPL1Q5W0Q7 1092 aa22.88■■□□□ 1.25
HERC1-207ENST00000560316 ZPR1O75312 459 aa22.86■■□□□ 1.25
HERC1-207ENST00000560316 ADAMTS7Q9UKP4 1686 aa22.86■■□□□ 1.25
HERC1-207ENST00000560316 HSPA1AP0DMV8 641 aaKnown RBP22.85■■□□□ 1.25
HERC1-207ENST00000560316 HSPA1BP0DMV9 641 aaKnown RBP22.85■■□□□ 1.25
HERC1-207ENST00000560316 DNAJC10Q8IXB1 793 aa22.85■■□□□ 1.25
HERC1-207ENST00000560316 GLTPD2A6NH11 291 aa22.84■■□□□ 1.25
HERC1-207ENST00000560316 VEGFAP15692 232 aaPredicted RBP22.84■■□□□ 1.25
HERC1-207ENST00000560316 LMNB1P20700 586 aa22.84■■□□□ 1.25
HERC1-207ENST00000560316 ZC3H4Q9UPT8 1303 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms