RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 EIF4A2Q14240 407 aaKnown RBP15.37■□□□□ 0.05
LINC02253-202ENST00000560314 GNPATO15228 680 aa15.36■□□□□ 0.05
LINC02253-202ENST00000560314 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
LINC02253-202ENST00000560314 ATP6V1AP38606 617 aa15.36■□□□□ 0.05
LINC02253-202ENST00000560314 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
LINC02253-202ENST00000560314 ITPK1Q13572 414 aa15.35■□□□□ 0.05
LINC02253-202ENST00000560314 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
LINC02253-202ENST00000560314 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
LINC02253-202ENST00000560314 GPBP1L1Q9HC44 474 aaPredicted RBP15.34■□□□□ 0.05
LINC02253-202ENST00000560314 ATG3Q9NT62 314 aa15.34■□□□□ 0.05
LINC02253-202ENST00000560314 KIAA1551Q9HCM1 1747 aa15.33■□□□□ 0.04
LINC02253-202ENST00000560314 C4AP0C0L4 1744 aa15.32■□□□□ 0.04
LINC02253-202ENST00000560314 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
LINC02253-202ENST00000560314 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC02253-202ENST00000560314 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
LINC02253-202ENST00000560314 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
LINC02253-202ENST00000560314 RTCBQ9Y3I0 505 aaKnown RBP15.32■□□□□ 0.04
LINC02253-202ENST00000560314 CNTNAP4Q9C0A0 1308 aa15.32■□□□□ 0.04
LINC02253-202ENST00000560314 PXDNLA1KZ92 1463 aa15.32■□□□□ 0.04
LINC02253-202ENST00000560314 MMP10P09238 476 aa15.31■□□□□ 0.04
LINC02253-202ENST00000560314 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
LINC02253-202ENST00000560314 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
LINC02253-202ENST00000560314 KDM6AO15550 1401 aaPredicted RBP15.31■□□□□ 0.04
LINC02253-202ENST00000560314 C10orf71Q711Q0 1435 aa15.31■□□□□ 0.04
LINC02253-202ENST00000560314 BRCA1P38398 1863 aaKnown RBP15.31■□□□□ 0.04
LINC02253-202ENST00000560314 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
LINC02253-202ENST00000560314 TRAPPC3LQ5T215 181 aa15.3■□□□□ 0.04
LINC02253-202ENST00000560314 SMIM5Q71RC9 77 aa15.3■□□□□ 0.04
LINC02253-202ENST00000560314 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
LINC02253-202ENST00000560314 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
LINC02253-202ENST00000560314 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
LINC02253-202ENST00000560314 PANK3Q9H999 370 aa15.29■□□□□ 0.04
LINC02253-202ENST00000560314 TGFB2P61812 414 aa15.28■□□□□ 0.04
LINC02253-202ENST00000560314 ZNF530Q6P9A1 599 aaPredicted RBP15.28■□□□□ 0.04
LINC02253-202ENST00000560314 TJP1Q07157 1748 aa15.27■□□□□ 0.04
LINC02253-202ENST00000560314 HSPA5P11021 654 aaKnown RBP15.27■□□□□ 0.04
LINC02253-202ENST00000560314 CABP4P57796 275 aa15.27■□□□□ 0.04
LINC02253-202ENST00000560314 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
LINC02253-202ENST00000560314 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
LINC02253-202ENST00000560314 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
LINC02253-202ENST00000560314 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.03
LINC02253-202ENST00000560314 RPS6KA4O75676 772 aa15.26■□□□□ 0.03
LINC02253-202ENST00000560314 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
LINC02253-202ENST00000560314 CEP350Q5VT06 3117 aa15.26■□□□□ 0.03
LINC02253-202ENST00000560314 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
LINC02253-202ENST00000560314 GYS1P13807 737 aa15.25■□□□□ 0.03
LINC02253-202ENST00000560314 RFC4P35249 363 aa15.25■□□□□ 0.03
LINC02253-202ENST00000560314 MTHFSP49914 203 aa15.25■□□□□ 0.03
LINC02253-202ENST00000560314 MORC1Q86VD1 984 aa15.25■□□□□ 0.03
LINC02253-202ENST00000560314 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
LINC02253-202ENST00000560314 HSPA6P17066 643 aa15.24■□□□□ 0.03
LINC02253-202ENST00000560314 ZNF526Q8TF50 670 aaPredicted RBP15.24■□□□□ 0.03
LINC02253-202ENST00000560314 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
LINC02253-202ENST00000560314 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
LINC02253-202ENST00000560314 MRC1P22897 1456 aa15.23■□□□□ 0.03
LINC02253-202ENST00000560314 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
LINC02253-202ENST00000560314 KNSTRNQ9Y448 316 aa15.23■□□□□ 0.03
LINC02253-202ENST00000560314 PARP3Q9Y6F1 533 aa15.23■□□□□ 0.03
LINC02253-202ENST00000560314 CRKLP46109 303 aaKnown RBP15.22■□□□□ 0.03
LINC02253-202ENST00000560314 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
LINC02253-202ENST00000560314 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
LINC02253-202ENST00000560314 KIF3CO14782 793 aa15.21■□□□□ 0.03
LINC02253-202ENST00000560314 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
LINC02253-202ENST00000560314 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
LINC02253-202ENST00000560314 PTCD1O75127 700 aaKnown RBP15.2■□□□□ 0.02
LINC02253-202ENST00000560314 IL13P35225 146 aa15.2■□□□□ 0.02
LINC02253-202ENST00000560314 AKAP4Q5JQC9 854 aa15.2■□□□□ 0.02
LINC02253-202ENST00000560314 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
LINC02253-202ENST00000560314 A0A0G2JLW4 131 aa15.19■□□□□ 0.02
LINC02253-202ENST00000560314 DPEP1P16444 411 aa15.19■□□□□ 0.02
LINC02253-202ENST00000560314 SLC52A2Q9HAB3 445 aa15.18■□□□□ 0.02
LINC02253-202ENST00000560314 UBR2Q8IWV8 1755 aa15.17■□□□□ 0.02
LINC02253-202ENST00000560314 FCHSD2O94868 740 aa15.17■□□□□ 0.02
LINC02253-202ENST00000560314 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
LINC02253-202ENST00000560314 PIM2Q9P1W9 311 aa15.17■□□□□ 0.02
LINC02253-202ENST00000560314 TOMM70O94826 608 aa15.16■□□□□ 0.02
LINC02253-202ENST00000560314 ARHGAP27Q6ZUM4 889 aa15.16■□□□□ 0.02
LINC02253-202ENST00000560314 NRXN2Q9P2S2 1712 aa15.16■□□□□ 0.02
LINC02253-202ENST00000560314 KCPQ6ZWJ8 1503 aa15.16■□□□□ 0.02
LINC02253-202ENST00000560314 DLEC1Q9Y238 1755 aa15.16■□□□□ 0.02
LINC02253-202ENST00000560314 KCNA3P22001 575 aa15.15■□□□□ 0.02
LINC02253-202ENST00000560314 DDR1Q08345 913 aa15.15■□□□□ 0.02
LINC02253-202ENST00000560314 FKBP8Q14318 412 aa15.15■□□□□ 0.02
LINC02253-202ENST00000560314 IFFO2Q5TF58 517 aa15.15■□□□□ 0.02
LINC02253-202ENST00000560314 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
LINC02253-202ENST00000560314 TNRC6CQ9HCJ0 1690 aaKnown RBP15.15■□□□□ 0.02
LINC02253-202ENST00000560314 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
LINC02253-202ENST00000560314 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
LINC02253-202ENST00000560314 SBF1O95248 1867 aa15.14■□□□□ 0.01
LINC02253-202ENST00000560314 ZPR1O75312 459 aa15.14■□□□□ 0.01
LINC02253-202ENST00000560314 APLP1P51693 650 aa15.14■□□□□ 0.01
LINC02253-202ENST00000560314 DALRD3Q5D0E6 543 aaKnown RBP15.14■□□□□ 0.01
LINC02253-202ENST00000560314 INTS5Q6P9B9 1019 aaKnown RBP15.14■□□□□ 0.01
LINC02253-202ENST00000560314 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
LINC02253-202ENST00000560314 COL15A1P39059 1388 aa15.13■□□□□ 0.01
LINC02253-202ENST00000560314 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
LINC02253-202ENST00000560314 RNMTO43148 476 aaKnown RBP15.13■□□□□ 0.01
LINC02253-202ENST00000560314 VSIG10Q8N0Z9 540 aa15.13■□□□□ 0.01
LINC02253-202ENST00000560314 KIF7Q2M1P5 1343 aa15.13■□□□□ 0.01
LINC02253-202ENST00000560314 TM4SF1P30408 202 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms