RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 PRDM9Q9NQV7 894 aa7.28□□□□□ -1.24
TPM1-222ENST00000560131 SOGA1O94964 1423 aa7.27□□□□□ -1.24
TPM1-222ENST00000560131 CLIP1P30622 1438 aa7.27□□□□□ -1.24
TPM1-222ENST00000560131 DXOO77932 396 aaKnown RBP7.27□□□□□ -1.25
TPM1-222ENST00000560131 LARGE2Q8N3Y3 721 aa7.27□□□□□ -1.25
TPM1-222ENST00000560131 ADAM32Q8TC27 787 aa7.27□□□□□ -1.25
TPM1-222ENST00000560131 NUDT12Q9BQG2 462 aa7.27□□□□□ -1.25
TPM1-222ENST00000560131 DNAAF2Q9NVR5 837 aaKnown RBP7.27□□□□□ -1.25
TPM1-222ENST00000560131 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
TPM1-222ENST00000560131 RBM19Q9Y4C8 960 aaKnown RBP7.27□□□□□ -1.25
TPM1-222ENST00000560131 SERPINB4P48594 390 aa7.26□□□□□ -1.25
TPM1-222ENST00000560131 MMP16P51512 607 aa7.26□□□□□ -1.25
TPM1-222ENST00000560131 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
TPM1-222ENST00000560131 CLDN10P78369 228 aa7.26□□□□□ -1.25
TPM1-222ENST00000560131 TSGA10IPQ3SY00 556 aa7.26□□□□□ -1.25
TPM1-222ENST00000560131 ZBTB33Q86T24 672 aa7.26□□□□□ -1.25
TPM1-222ENST00000560131 ARHGAP9Q9BRR9 750 aa7.26□□□□□ -1.25
TPM1-222ENST00000560131 RRBP1Q9P2E9 1410 aaKnown RBP7.26□□□□□ -1.25
TPM1-222ENST00000560131 ZBTB7BO15156 539 aaPredicted RBP7.25□□□□□ -1.25
TPM1-222ENST00000560131 BMP1P13497 986 aa7.25□□□□□ -1.25
TPM1-222ENST00000560131 XP32Q5T750 250 aa7.25□□□□□ -1.25
TPM1-222ENST00000560131 RC3H1Q5TC82 1133 aaKnown RBP7.25□□□□□ -1.25
TPM1-222ENST00000560131 ERICH6BQ5W0A0 696 aa7.25□□□□□ -1.25
TPM1-222ENST00000560131 ZNF594Q96JF6 807 aaPredicted RBP7.25□□□□□ -1.25
TPM1-222ENST00000560131 IGSF5Q9NSI5 407 aa7.25□□□□□ -1.25
TPM1-222ENST00000560131 SMARCA4P51532 1647 aa7.24□□□□□ -1.25
TPM1-222ENST00000560131 CAPN5O15484 640 aaPredicted RBP7.24□□□□□ -1.25
TPM1-222ENST00000560131 DKK1O94907 266 aa7.24□□□□□ -1.25
TPM1-222ENST00000560131 NOM1Q5C9Z4 860 aaKnown RBP7.24□□□□□ -1.25
TPM1-222ENST00000560131 DZIP3Q86Y13 1208 aaKnown RBP7.24□□□□□ -1.25
TPM1-222ENST00000560131 SIX5Q8N196 739 aa7.24□□□□□ -1.25
TPM1-222ENST00000560131 BIN2Q9UBW5 565 aaPredicted RBP7.24□□□□□ -1.25
TPM1-222ENST00000560131 CCER2I3L3R5 266 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 ALDH1A1P00352 501 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 SEC13P55735 322 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 TAS1R3Q7RTX0 852 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 MRRFQ96E11 262 aaKnown RBP7.23□□□□□ -1.25
TPM1-222ENST00000560131 BCL2L13Q9BXK5 485 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 DOLKQ9UPQ8 538 aa7.23□□□□□ -1.25
TPM1-222ENST00000560131 RNF225M0QZC1 329 aaPredicted RBP7.22□□□□□ -1.25
TPM1-222ENST00000560131 ZNF16P17020 682 aaPredicted RBP7.22□□□□□ -1.25
TPM1-222ENST00000560131 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
TPM1-222ENST00000560131 CCDC85AQ96PX6 553 aaPredicted RBP7.22□□□□□ -1.25
TPM1-222ENST00000560131 KIAA1522Q9P206 1035 aaPredicted RBP7.22□□□□□ -1.25
TPM1-222ENST00000560131 EGFL7Q9UHF1 273 aa7.22□□□□□ -1.25
TPM1-222ENST00000560131 ERICH3Q5RHP9 1530 aa7.22□□□□□ -1.25
TPM1-222ENST00000560131 NEFLP07196 543 aa7.21□□□□□ -1.26
TPM1-222ENST00000560131 SCNN1AP37088 669 aa7.21□□□□□ -1.26
TPM1-222ENST00000560131 RNF20Q5VTR2 975 aa7.21□□□□□ -1.26
TPM1-222ENST00000560131 CCDC102BQ68D86 513 aa7.21□□□□□ -1.26
TPM1-222ENST00000560131 CXXC1Q9P0U4 656 aaPredicted RBP7.21□□□□□ -1.26
TPM1-222ENST00000560131 KIAA1024Q9UPX6 916 aa7.21□□□□□ -1.26
TPM1-222ENST00000560131 ANKRD33BA6NCL7 494 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 PRMT3O60678 531 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 IGHA1P01876 353 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 WNT7BP56706 349 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 GTF2IP78347 998 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 OCLNQ16625 522 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 PRIMPOLQ96LW4 560 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 ZFP42Q96MM3 310 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 RUSC2Q8N2Y8 1516 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 PEG3Q9GZU2 1588 aa7.2□□□□□ -1.26
TPM1-222ENST00000560131 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
TPM1-222ENST00000560131 ABL1P00519 1130 aa7.19□□□□□ -1.26
TPM1-222ENST00000560131 OXLD1Q5BKU9 147 aa7.19□□□□□ -1.26
TPM1-222ENST00000560131 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
TPM1-222ENST00000560131 SH3RF1Q7Z6J0 888 aa7.19□□□□□ -1.26
TPM1-222ENST00000560131 MAP3K1Q13233 1512 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 SFI1A8K8P3 1242 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 ICMTO60725 284 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 SKOR1P84550 965 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 USP4Q13107 963 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 ZNF326Q5BKZ1 582 aaKnown RBP7.18□□□□□ -1.26
TPM1-222ENST00000560131 GPAT2Q6NUI2 795 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 GIPC2Q8TF65 315 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 USP35Q9P2H5 1018 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
TPM1-222ENST00000560131 BPHLQ86WA6 291 aaPredicted RBP7.17□□□□□ -1.26
TPM1-222ENST00000560131 CCDC125Q86Z20 511 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 TPCN2Q8NHX9 752 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 HINFPQ9BQA5 517 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 CARD14Q9BXL6 1004 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 ADAMTS8Q9UP79 889 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 WASF2Q9Y6W5 498 aa7.17□□□□□ -1.26
TPM1-222ENST00000560131 MAGEB6P1A0A0J9YX57 407 aa7.16□□□□□ -1.26
TPM1-222ENST00000560131 GLYCTKQ8IVS8 523 aa7.16□□□□□ -1.26
TPM1-222ENST00000560131 MAPKBP1O60336 1514 aa7.16□□□□□ -1.26
TPM1-222ENST00000560131 H3BRB1 525 aa7.15□□□□□ -1.26
TPM1-222ENST00000560131 PSME1Q06323 249 aa7.15□□□□□ -1.26
TPM1-222ENST00000560131 ERFEQ4G0M1 354 aa7.15□□□□□ -1.26
TPM1-222ENST00000560131 TUT1Q9H6E5 874 aaKnown RBP7.15□□□□□ -1.26
TPM1-222ENST00000560131 ANO2Q9NQ90 1003 aa7.15□□□□□ -1.26
TPM1-222ENST00000560131 DNMT3AQ9Y6K1 912 aaPredicted RBP7.15□□□□□ -1.26
TPM1-222ENST00000560131 M0R2N6 131 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms