RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
LRRC49-221ENST00000560107 TSHZ3Q63HK5 1081 aa6.26□□□□□ -1.41
LRRC49-221ENST00000560107 ALKQ9UM73 1620 aa6.26□□□□□ -1.41
LRRC49-221ENST00000560107 BRD1O95696 1058 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 MBD3O95983 291 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 MCM5P33992 734 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 PDE1AP54750 535 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 CSPP1Q1MSJ5 1256 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 FOXD4L6Q3SYB3 417 aaPredicted RBP6.25□□□□□ -1.41
LRRC49-221ENST00000560107 FOXD4L3Q6VB84 417 aaPredicted RBP6.25□□□□□ -1.41
LRRC49-221ENST00000560107 ATP7BP35670 1465 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 CDK12Q9NYV4 1490 aaPredicted RBP6.25□□□□□ -1.41
LRRC49-221ENST00000560107 GTF2E1P29083 439 aaPredicted RBP6.25□□□□□ -1.41
LRRC49-221ENST00000560107 MCM10Q7L590 875 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 MPNDQ8N594 471 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 PALD1Q9ULE6 856 aa6.25□□□□□ -1.41
LRRC49-221ENST00000560107 CPSF1Q10570 1443 aaKnown RBP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 GADD45BO75293 160 aaPredicted RBP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 PTMAP06454 111 aaKnown RBP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 FBXO31Q5XUX0 539 aaPredicted RBP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 SASS6Q6UVJ0 657 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 MAP7D2Q96T17 732 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 TSPY26PQ9H489 355 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 GDPD2Q9HCC8 539 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 NCKAP5LQ9HCH0 1330 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 F6X3S4 739 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 DYNC1I1O14576 645 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 SLC4A2P04920 1241 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 NPM1P06748 294 aaKnown RBP eCLIP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 CUL4AQ13619 759 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 SLC4A10Q6U841 1118 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 OSBPL3Q9H4L5 887 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 KCNG1Q9UIX4 513 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 EXOC6BQ9Y2D4 811 aa6.24□□□□□ -1.41
LRRC49-221ENST00000560107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.24□□□□□ -1.41
LRRC49-221ENST00000560107 DIP2CQ9Y2E4 1556 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 PREX1Q8TCU6 1659 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 CHL1O00533 1208 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 SULT6B1Q6IMI4 303 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 G2E3Q7L622 706 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 COG3Q96JB2 828 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 ESYT1Q9BSJ8 1104 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 MIS18AQ9NYP9 233 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 PTPRCP08575 1304 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 AATKQ6ZMQ8 1374 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 EDC4Q6P2E9 1401 aaKnown RBP6.23□□□□□ -1.41
LRRC49-221ENST00000560107 CPS1P31327 1500 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 HMMRO75330 724 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 JARID2Q92833 1246 aaPredicted RBP6.23□□□□□ -1.41
LRRC49-221ENST00000560107 ZNF830Q96NB3 372 aaPredicted RBP6.23□□□□□ -1.41
LRRC49-221ENST00000560107 RNF216Q9NWF9 866 aaPredicted RBP6.23□□□□□ -1.41
LRRC49-221ENST00000560107 STAG3Q9UJ98 1225 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 PRDM4Q9UKN5 801 aa6.23□□□□□ -1.41
LRRC49-221ENST00000560107 MCM2P49736 904 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 EIF4A2Q14240 407 aaKnown RBP6.22□□□□□ -1.41
LRRC49-221ENST00000560107 USP48Q86UV5 1035 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 RILPL2Q969X0 211 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 UPF3BQ9BZI7 483 aaKnown RBP6.22□□□□□ -1.41
LRRC49-221ENST00000560107 ANO2Q9NQ90 1003 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 TRIM6-TRIM34B2RNG4 842 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 WASLO00401 505 aaPredicted RBP6.22□□□□□ -1.41
LRRC49-221ENST00000560107 MCCP23508 829 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 CHMLP26374 656 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 TSC1Q92574 1164 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 SYAP1Q96A49 352 aaPredicted RBP6.22□□□□□ -1.41
LRRC49-221ENST00000560107 INTS4Q96HW7 963 aaKnown RBP6.22□□□□□ -1.41
LRRC49-221ENST00000560107 KIAA0232Q92628 1395 aa6.22□□□□□ -1.41
LRRC49-221ENST00000560107 DNTTIP2Q5QJE6 756 aaKnown RBP6.21□□□□□ -1.41
LRRC49-221ENST00000560107 NUDT16Q96DE0 195 aaKnown RBP6.21□□□□□ -1.41
LRRC49-221ENST00000560107 SALL3Q9BXA9 1300 aa6.21□□□□□ -1.41
LRRC49-221ENST00000560107 TCHHQ07283 1943 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 GNAI2P04899 355 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 MX1P20591 662 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 UNC5CLQ8IV45 518 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 C17orf53Q8N3J3 647 aaPredicted RBP6.21□□□□□ -1.42
LRRC49-221ENST00000560107 LRRCC1Q9C099 1032 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 TTC12Q9H892 705 aaPredicted RBP6.21□□□□□ -1.42
LRRC49-221ENST00000560107 USP25Q9UHP3 1055 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 TUBGCP6Q96RT7 1819 aa6.21□□□□□ -1.42
LRRC49-221ENST00000560107 PNMA6EA0A0J9YXQ4 647 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 ANAPC15P60006 121 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 MTERF4Q7Z6M4 381 aaKnown RBP6.2□□□□□ -1.42
LRRC49-221ENST00000560107 MYRIPQ8NFW9 859 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 IL25Q9H293 177 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 RIMBP3CA6NJZ7 1639 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 RIMBP3BA6NNM3 1639 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 RIMBP3Q9UFD9 1639 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 DLC1Q96QB1 1528 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 WDR33Q9C0J8 1336 aaKnown RBP6.2□□□□□ -1.42
LRRC49-221ENST00000560107 FOXO3O43524 673 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 PHF14O94880 888 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 ADCY5O95622 1261 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 CCT4P50991 539 aaKnown RBP6.2□□□□□ -1.42
LRRC49-221ENST00000560107 TXNDC2Q86VQ3 553 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 SRCIN1Q9C0H9 1055 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 CNPY2Q9Y2B0 182 aa6.2□□□□□ -1.42
LRRC49-221ENST00000560107 CRB1P82279 1406 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms