RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
CRTC3-207ENST00000560047 NLRP3Q96P20 1036 aa12.13□□□□□ -0.47
CRTC3-207ENST00000560047 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
CRTC3-207ENST00000560047 POLMQ9NP87 494 aaPredicted RBP12.13□□□□□ -0.47
CRTC3-207ENST00000560047 SOS2Q07890 1332 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-207ENST00000560047 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
CRTC3-207ENST00000560047 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
CRTC3-207ENST00000560047 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
CRTC3-207ENST00000560047 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
CRTC3-207ENST00000560047 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
CRTC3-207ENST00000560047 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-207ENST00000560047 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
CRTC3-207ENST00000560047 MAN1A2O60476 641 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 PSME1Q06323 249 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 XAGE2Q96GT9 111 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 ESYT1Q9BSJ8 1104 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 VRTNQ9H8Y1 702 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 RAB6BQ9NRW1 208 aa12.1□□□□□ -0.47
CRTC3-207ENST00000560047 RFX1P22670 979 aa12.09□□□□□ -0.47
CRTC3-207ENST00000560047 RNF144AP50876 292 aaPredicted RBP12.09□□□□□ -0.47
CRTC3-207ENST00000560047 IFT140Q96RY7 1462 aa12.08□□□□□ -0.47
CRTC3-207ENST00000560047 GPC1P35052 558 aa12.08□□□□□ -0.48
CRTC3-207ENST00000560047 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
CRTC3-207ENST00000560047 CCDC82Q8N4S0 544 aa12.08□□□□□ -0.48
CRTC3-207ENST00000560047 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
CRTC3-207ENST00000560047 ETNK1Q9HBU6 452 aa12.08□□□□□ -0.48
CRTC3-207ENST00000560047 DNAAF2Q9NVR5 837 aaKnown RBP12.08□□□□□ -0.48
CRTC3-207ENST00000560047 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
CRTC3-207ENST00000560047 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
CRTC3-207ENST00000560047 FIGNL2A6NMB9 653 aa12.07□□□□□ -0.48
CRTC3-207ENST00000560047 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
CRTC3-207ENST00000560047 IL2RAP01589 272 aa12.07□□□□□ -0.48
CRTC3-207ENST00000560047 INHAP05111 366 aa12.07□□□□□ -0.48
CRTC3-207ENST00000560047 RASA1P20936 1047 aa12.07□□□□□ -0.48
CRTC3-207ENST00000560047 GDF10P55107 478 aa12.07□□□□□ -0.48
CRTC3-207ENST00000560047 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
CRTC3-207ENST00000560047 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
CRTC3-207ENST00000560047 WASLO00401 505 aaPredicted RBP12.06□□□□□ -0.48
CRTC3-207ENST00000560047 STAU1O95793 577 aaKnown RBP12.06□□□□□ -0.48
CRTC3-207ENST00000560047 SCNN1DP51172 638 aa12.06□□□□□ -0.48
CRTC3-207ENST00000560047 CLDN10P78369 228 aa12.06□□□□□ -0.48
CRTC3-207ENST00000560047 LARP1Q6PKG0 1096 aaKnown RBP12.06□□□□□ -0.48
CRTC3-207ENST00000560047 DNMT3LQ9UJW3 386 aa12.06□□□□□ -0.48
CRTC3-207ENST00000560047 CENPCQ03188 943 aa12.05□□□□□ -0.48
CRTC3-207ENST00000560047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.05□□□□□ -0.48
CRTC3-207ENST00000560047 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
CRTC3-207ENST00000560047 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
CRTC3-207ENST00000560047 RNF217Q8TC41 542 aa12.05□□□□□ -0.48
CRTC3-207ENST00000560047 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
CRTC3-207ENST00000560047 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■■■■ 26.9
CRTC3-207ENST00000560047 TMEM229AB2RXF0 380 aa12.04□□□□□ -0.48
CRTC3-207ENST00000560047 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
CRTC3-207ENST00000560047 HRH3Q9Y5N1 445 aa12.04□□□□□ -0.48
CRTC3-207ENST00000560047 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
CRTC3-207ENST00000560047 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
CRTC3-207ENST00000560047 BACH1O14867 736 aa12.03□□□□□ -0.48
CRTC3-207ENST00000560047 LYSMD3Q7Z3D4 306 aa12.03□□□□□ -0.48
CRTC3-207ENST00000560047 TPCN2Q8NHX9 752 aa12.03□□□□□ -0.48
CRTC3-207ENST00000560047 GRIP2Q9C0E4 1043 aa12.03□□□□□ -0.48
CRTC3-207ENST00000560047 ZNF594Q96JF6 807 aaPredicted RBP12.02□□□□□ -0.49
CRTC3-207ENST00000560047 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
CRTC3-207ENST00000560047 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
CRTC3-207ENST00000560047 KIAA1024Q9UPX6 916 aa12.02□□□□□ -0.49
CRTC3-207ENST00000560047 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
CRTC3-207ENST00000560047 GTF2E1P29083 439 aaPredicted RBP12.01□□□□□ -0.49
CRTC3-207ENST00000560047 CDCA8Q53HL2 280 aa12.01□□□□□ -0.49
CRTC3-207ENST00000560047 PRICKLE2Q7Z3G6 844 aa12.01□□□□□ -0.49
CRTC3-207ENST00000560047 SIX5Q8N196 739 aa12.01□□□□□ -0.49
CRTC3-207ENST00000560047 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
CRTC3-207ENST00000560047 ZSCAN10Q96SZ4 725 aaPredicted RBP12.01□□□□□ -0.49
CRTC3-207ENST00000560047 SMTNP53814 917 aa12□□□□□ -0.49
CRTC3-207ENST00000560047 PTK7Q13308 1070 aa12□□□□□ -0.49
CRTC3-207ENST00000560047 TLR1Q15399 786 aa12□□□□□ -0.49
CRTC3-207ENST00000560047 CRTC2Q53ET0 693 aaPredicted RBP12□□□□□ -0.49
CRTC3-207ENST00000560047 ZNF358Q9NW07 568 aa12□□□□□ -0.49
CRTC3-207ENST00000560047 RUSC2Q8N2Y8 1516 aa12□□□□□ -0.49
CRTC3-207ENST00000560047 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
CRTC3-207ENST00000560047 FHDC1Q9C0D6 1143 aaPredicted RBP11.99□□□□□ -0.49
CRTC3-207ENST00000560047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.98□□□□□ -0.49
CRTC3-207ENST00000560047 TMEM214Q6NUQ4 689 aaKnown RBP11.98□□□□□ -0.49
CRTC3-207ENST00000560047 PBXIP1Q96AQ6 731 aa11.98□□□□□ -0.49
CRTC3-207ENST00000560047 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 A6NJY4 79 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 SPATA31C2B4DYI2 1134 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L15C9J2P7 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L10C9JJH3 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L13C9JLJ4 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L11C9JVI0 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L21D6R901 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L18D6R9N7 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L22D6RA61 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L17D6RBQ6 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L19D6RCP7 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L20D6RJB6 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 USP17L24Q0WX57 530 aa11.97□□□□□ -0.49
CRTC3-207ENST00000560047 M0R2N6 131 aa11.96□□□□□ -0.49
CRTC3-207ENST00000560047 DKK1O94907 266 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms