RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
TM2D3-208ENST00000559891 ADAMTS7Q9UKP4 1686 aa15.09■□□□□ 0.01
TM2D3-208ENST00000559891 KCNQ2O43526 872 aa15.08■□□□□ 0.01
TM2D3-208ENST00000559891 PDE3BQ13370 1112 aa15.08■□□□□ 0.01
TM2D3-208ENST00000559891 SLC39A6Q13433 755 aa15.08■□□□□ 0.01
TM2D3-208ENST00000559891 MBIPQ9NS73 344 aa15.08■□□□□ 0.01
TM2D3-208ENST00000559891 ZNF853P0CG23 659 aa15.08■□□□□ 0
TM2D3-208ENST00000559891 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
TM2D3-208ENST00000559891 NGEFQ8N5V2 710 aa15.08■□□□□ 0
TM2D3-208ENST00000559891 RGS12O14924 1447 aa15.07■□□□□ 0
TM2D3-208ENST00000559891 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
TM2D3-208ENST00000559891 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
TM2D3-208ENST00000559891 SLC52A2Q9HAB3 445 aa15.07■□□□□ 0
TM2D3-208ENST00000559891 PLEKHG2Q9H7P9 1386 aa15.07■□□□□ 0
TM2D3-208ENST00000559891 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
TM2D3-208ENST00000559891 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
TM2D3-208ENST00000559891 TEFQ10587 303 aa15.07■□□□□ 0
TM2D3-208ENST00000559891 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
TM2D3-208ENST00000559891 CHL1O00533 1208 aa15.06■□□□□ 0
TM2D3-208ENST00000559891 CFAP44Q96MT7 982 aa15.06■□□□□ 0
TM2D3-208ENST00000559891 CABP4P57796 275 aa15.05■□□□□ 0
TM2D3-208ENST00000559891 TAF7Q15545 349 aaPredicted RBP15.05■□□□□ 0
TM2D3-208ENST00000559891 DOT1LQ8TEK3 1739 aa15.05■□□□□ 0
TM2D3-208ENST00000559891 E9PSI1 815 aa15.05■□□□□ -0
TM2D3-208ENST00000559891 TSPYL6Q8N831 410 aa15.05■□□□□ -0
TM2D3-208ENST00000559891 PIGBQ92521 554 aa15.05■□□□□ -0
TM2D3-208ENST00000559891 IFT57Q9NWB7 429 aa15.05■□□□□ -0
TM2D3-208ENST00000559891 SIPA1L3O60292 1781 aaPredicted RBP15.05■□□□□ -0
TM2D3-208ENST00000559891 ITGB4P16144 1822 aa15.04■□□□□ -0
TM2D3-208ENST00000559891 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
TM2D3-208ENST00000559891 KRT27Q7Z3Y8 459 aa15.04■□□□□ -0
TM2D3-208ENST00000559891 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
TM2D3-208ENST00000559891 BTBD11A6QL63 1104 aa15.04■□□□□ -0
TM2D3-208ENST00000559891 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
TM2D3-208ENST00000559891 IL16Q14005 1332 aa15.03■□□□□ -0
TM2D3-208ENST00000559891 GNAI1P63096 354 aa15.03■□□□□ -0
TM2D3-208ENST00000559891 C8orf58Q8NAV2 365 aa15.03■□□□□ -0
TM2D3-208ENST00000559891 ASAP1Q9ULH1 1129 aa15.03■□□□□ -0
TM2D3-208ENST00000559891 PRAMEF22A3QJZ6 481 aa15.02■□□□□ -0
TM2D3-208ENST00000559891 MRC1P22897 1456 aa15.02□□□□□ -0.01
TM2D3-208ENST00000559891 ERVV-2B6SEH9 535 aa15.02□□□□□ -0.01
TM2D3-208ENST00000559891 PPP4R2Q9NY27 417 aa15.02□□□□□ -0.01
TM2D3-208ENST00000559891 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
TM2D3-208ENST00000559891 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
TM2D3-208ENST00000559891 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
TM2D3-208ENST00000559891 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
TM2D3-208ENST00000559891 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
TM2D3-208ENST00000559891 ZNF790Q6PG37 636 aa15□□□□□ -0.01
TM2D3-208ENST00000559891 BCL9O00512 1426 aa15□□□□□ -0.01
TM2D3-208ENST00000559891 PTCD1O75127 700 aaKnown RBP14.99□□□□□ -0.01
TM2D3-208ENST00000559891 KDM3BQ7LBC6 1761 aa14.99□□□□□ -0.01
TM2D3-208ENST00000559891 ZNF496Q96IT1 587 aaPredicted RBP14.99□□□□□ -0.01
TM2D3-208ENST00000559891 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
TM2D3-208ENST00000559891 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
TM2D3-208ENST00000559891 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
TM2D3-208ENST00000559891 TRIM37O94972 964 aa14.98□□□□□ -0.01
TM2D3-208ENST00000559891 KCNQ4P56696 695 aa14.98□□□□□ -0.01
TM2D3-208ENST00000559891 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
TM2D3-208ENST00000559891 MSH5O43196 834 aa14.97□□□□□ -0.01
TM2D3-208ENST00000559891 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
TM2D3-208ENST00000559891 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
TM2D3-208ENST00000559891 VAMP4O75379 141 aa14.96□□□□□ -0.01
TM2D3-208ENST00000559891 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
TM2D3-208ENST00000559891 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
TM2D3-208ENST00000559891 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
TM2D3-208ENST00000559891 PAPPAQ13219 1627 aa14.94□□□□□ -0.02
TM2D3-208ENST00000559891 BCAR3O75815 825 aa14.94□□□□□ -0.02
TM2D3-208ENST00000559891 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
TM2D3-208ENST00000559891 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
TM2D3-208ENST00000559891 BTAF1O14981 1849 aa14.94□□□□□ -0.02
TM2D3-208ENST00000559891 NHSQ6T4R5 1651 aa14.93□□□□□ -0.02
TM2D3-208ENST00000559891 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
TM2D3-208ENST00000559891 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
TM2D3-208ENST00000559891 BABAM1Q9NWV8 329 aa14.93□□□□□ -0.02
TM2D3-208ENST00000559891 USP16Q9Y5T5 823 aa14.93□□□□□ -0.02
TM2D3-208ENST00000559891 HEG1Q9ULI3 1381 aa14.93□□□□□ -0.02
TM2D3-208ENST00000559891 EIF2S2P20042 333 aaKnown RBP14.93□□□□□ -0.02
TM2D3-208ENST00000559891 C5P01031 1676 aa14.93□□□□□ -0.02
TM2D3-208ENST00000559891 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
TM2D3-208ENST00000559891 ANXA1P04083 346 aa14.92□□□□□ -0.02
TM2D3-208ENST00000559891 RCAN3Q9UKA8 241 aa14.92□□□□□ -0.02
TM2D3-208ENST00000559891 PALLDQ8WX93 1383 aa14.91□□□□□ -0.02
TM2D3-208ENST00000559891 RARSP54136 660 aaKnown RBP14.91□□□□□ -0.02
TM2D3-208ENST00000559891 SSH1Q8WYL5 1049 aa14.91□□□□□ -0.02
TM2D3-208ENST00000559891 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
TM2D3-208ENST00000559891 DNAJC10Q8IXB1 793 aa14.9□□□□□ -0.02
TM2D3-208ENST00000559891 FMNL2Q96PY5 1086 aa14.9□□□□□ -0.02
TM2D3-208ENST00000559891 PLIN1O60240 522 aa14.9□□□□□ -0.02
TM2D3-208ENST00000559891 ITPK1Q13572 414 aa14.89□□□□□ -0.03
TM2D3-208ENST00000559891 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
TM2D3-208ENST00000559891 TNNQ9UQP3 1299 aa14.89□□□□□ -0.03
TM2D3-208ENST00000559891 LOC102724428A0A0B4J2F2 783 aa14.89□□□□□ -0.03
TM2D3-208ENST00000559891 SIK1P57059 783 aa14.89□□□□□ -0.03
TM2D3-208ENST00000559891 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
TM2D3-208ENST00000559891 A1BGP04217 495 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 HDGFL1Q5TGJ6 251 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 SMIM5Q71RC9 77 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 G2E3Q7L622 706 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 CHPF2Q9P2E5 772 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms