RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
TRAF3-207ENST00000559734 WDR90Q96KV7 1748 aa15.09■□□□□ 0.01
TRAF3-207ENST00000559734 DPEP1P16444 411 aa15.08■□□□□ 0
TRAF3-207ENST00000559734 COL13A1Q5TAT6 717 aaPredicted RBP15.08■□□□□ 0
TRAF3-207ENST00000559734 CCDC87Q9NVE4 849 aa15.08■□□□□ 0
TRAF3-207ENST00000559734 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
TRAF3-207ENST00000559734 EMILIN1Q9Y6C2 1016 aa15.08■□□□□ 0
TRAF3-207ENST00000559734 C10orf71Q711Q0 1435 aa15.08■□□□□ 0
TRAF3-207ENST00000559734 TMF1P82094 1093 aa15.07■□□□□ 0
TRAF3-207ENST00000559734 NKX1-1Q15270 411 aaPredicted RBP15.07■□□□□ 0
TRAF3-207ENST00000559734 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
TRAF3-207ENST00000559734 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
TRAF3-207ENST00000559734 RBM46Q8TBY0 533 aaKnown RBP15.07■□□□□ 0
TRAF3-207ENST00000559734 KLRG1Q96E93 195 aa15.07■□□□□ 0
TRAF3-207ENST00000559734 MAP2P11137 1827 aaKnown RBP15.07■□□□□ 0
TRAF3-207ENST00000559734 KIAA1551Q9HCM1 1747 aa15.06■□□□□ 0
TRAF3-207ENST00000559734 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
TRAF3-207ENST00000559734 KIF24Q5T7B8 1368 aa15.06■□□□□ 0
TRAF3-207ENST00000559734 NLGN1Q8N2Q7 840 aa15.05■□□□□ -0
TRAF3-207ENST00000559734 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
TRAF3-207ENST00000559734 ATG3Q9NT62 314 aa15.05■□□□□ -0
TRAF3-207ENST00000559734 PARP3Q9Y6F1 533 aa15.05■□□□□ -0
TRAF3-207ENST00000559734 KIF13BQ9NQT8 1826 aa15.04■□□□□ -0
TRAF3-207ENST00000559734 KCPQ6ZWJ8 1503 aa15.04■□□□□ -0
TRAF3-207ENST00000559734 PLEKHG2Q9H7P9 1386 aa15.04■□□□□ -0
TRAF3-207ENST00000559734 SLC24A1O60721 1099 aa15.04■□□□□ -0
TRAF3-207ENST00000559734 IFNL2Q8IZJ0 200 aa15.04■□□□□ -0
TRAF3-207ENST00000559734 TNS4Q8IZW8 715 aa15.04■□□□□ -0
TRAF3-207ENST00000559734 KDM2BQ8NHM5 1336 aa15.03■□□□□ -0
TRAF3-207ENST00000559734 PHKG2P15735 406 aa15.03■□□□□ -0
TRAF3-207ENST00000559734 RFC4P35249 363 aa15.03■□□□□ -0
TRAF3-207ENST00000559734 RNF181Q9P0P0 153 aa15.03■□□□□ -0
TRAF3-207ENST00000559734 FSTL1Q12841 308 aa15.02■□□□□ -0
TRAF3-207ENST00000559734 ARHGEF1Q92888 912 aaKnown RBP15.02■□□□□ -0
TRAF3-207ENST00000559734 EYA1Q99502 592 aa15.02■□□□□ -0
TRAF3-207ENST00000559734 RRAGCQ9HB90 399 aa15.02■□□□□ -0
TRAF3-207ENST00000559734 C4AP0C0L4 1744 aa15.02□□□□□ -0.01
TRAF3-207ENST00000559734 KDRP35968 1356 aa15.01□□□□□ -0.01
TRAF3-207ENST00000559734 GYS1P13807 737 aa15.01□□□□□ -0.01
TRAF3-207ENST00000559734 JMYQ8N9B5 988 aa15.01□□□□□ -0.01
TRAF3-207ENST00000559734 NCAPD2Q15021 1401 aa15□□□□□ -0.01
TRAF3-207ENST00000559734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15□□□□□ -0.01
TRAF3-207ENST00000559734 PIM2Q9P1W9 311 aa15□□□□□ -0.01
TRAF3-207ENST00000559734 DALRD3Q5D0E6 543 aaKnown RBP14.99□□□□□ -0.01
TRAF3-207ENST00000559734 SLC4A9Q96Q91 983 aa14.99□□□□□ -0.01
TRAF3-207ENST00000559734 CNTNAP4Q9C0A0 1308 aa14.98□□□□□ -0.01
TRAF3-207ENST00000559734 RPS6KA4O75676 772 aa14.98□□□□□ -0.01
TRAF3-207ENST00000559734 KCNA3P22001 575 aa14.98□□□□□ -0.01
TRAF3-207ENST00000559734 DCAF5Q96JK2 942 aa14.98□□□□□ -0.01
TRAF3-207ENST00000559734 WASHC2AQ641Q2 1341 aa14.97□□□□□ -0.01
TRAF3-207ENST00000559734 CHRNA5P30532 468 aa14.97□□□□□ -0.01
TRAF3-207ENST00000559734 RC3H1Q5TC82 1133 aaKnown RBP14.97□□□□□ -0.01
TRAF3-207ENST00000559734 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
TRAF3-207ENST00000559734 CARD14Q9BXL6 1004 aa14.97□□□□□ -0.01
TRAF3-207ENST00000559734 SRP68Q9UHB9 627 aaKnown RBP14.97□□□□□ -0.01
TRAF3-207ENST00000559734 BRCA1P38398 1863 aaKnown RBP14.97□□□□□ -0.01
TRAF3-207ENST00000559734 PRELPP51888 382 aa14.96□□□□□ -0.01
TRAF3-207ENST00000559734 CDCA8Q53HL2 280 aa14.96□□□□□ -0.01
TRAF3-207ENST00000559734 ARFGEF1Q9Y6D6 1849 aa14.95□□□□□ -0.02
TRAF3-207ENST00000559734 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
TRAF3-207ENST00000559734 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
TRAF3-207ENST00000559734 CABP4P57796 275 aa14.95□□□□□ -0.02
TRAF3-207ENST00000559734 RASSF7Q02833 373 aa14.95□□□□□ -0.02
TRAF3-207ENST00000559734 FKBP8Q14318 412 aa14.95□□□□□ -0.02
TRAF3-207ENST00000559734 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
TRAF3-207ENST00000559734 TNRC6CQ9HCJ0 1690 aaKnown RBP14.94□□□□□ -0.02
TRAF3-207ENST00000559734 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
TRAF3-207ENST00000559734 HSPA1AP0DMV8 641 aaKnown RBP14.94□□□□□ -0.02
TRAF3-207ENST00000559734 HSPA1BP0DMV9 641 aaKnown RBP14.94□□□□□ -0.02
TRAF3-207ENST00000559734 DDR1Q08345 913 aa14.94□□□□□ -0.02
TRAF3-207ENST00000559734 EIF4A2Q14240 407 aaKnown RBP14.94□□□□□ -0.02
TRAF3-207ENST00000559734 ANKRD26Q9UPS8 1709 aa14.94□□□□□ -0.02
TRAF3-207ENST00000559734 HSP90AB1P08238 724 aaKnown RBP14.93□□□□□ -0.02
TRAF3-207ENST00000559734 USP42Q9H9J4 1324 aaKnown RBP14.92□□□□□ -0.02
TRAF3-207ENST00000559734 CRKLP46109 303 aaKnown RBP14.92□□□□□ -0.02
TRAF3-207ENST00000559734 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
TRAF3-207ENST00000559734 POLKQ9UBT6 870 aa14.92□□□□□ -0.02
TRAF3-207ENST00000559734 KDM6AO15550 1401 aaPredicted RBP14.92□□□□□ -0.02
TRAF3-207ENST00000559734 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-207ENST00000559734 POLR3GLQ9BT43 218 aa14.91□□□□□ -0.02
TRAF3-207ENST00000559734 ZNF831Q5JPB2 1677 aa14.9□□□□□ -0.02
TRAF3-207ENST00000559734 POLRMTO00411 1230 aaKnown RBP14.89□□□□□ -0.03
TRAF3-207ENST00000559734 MTHFSP49914 203 aa14.89□□□□□ -0.03
TRAF3-207ENST00000559734 C1orf141Q5JVX7 400 aa14.89□□□□□ -0.03
TRAF3-207ENST00000559734 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
TRAF3-207ENST00000559734 ZPR1O75312 459 aa14.88□□□□□ -0.03
TRAF3-207ENST00000559734 VEGFAP15692 232 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-207ENST00000559734 LMNB1P20700 586 aa14.87□□□□□ -0.03
TRAF3-207ENST00000559734 USPL1Q5W0Q7 1092 aa14.87□□□□□ -0.03
TRAF3-207ENST00000559734 NFATC2IPQ8NCF5 419 aa14.87□□□□□ -0.03
TRAF3-207ENST00000559734 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
TRAF3-207ENST00000559734 GLTPD2A6NH11 291 aa14.86□□□□□ -0.03
TRAF3-207ENST00000559734 AMOTQ4VCS5 1084 aa14.86□□□□□ -0.03
TRAF3-207ENST00000559734 SBF1O95248 1867 aa14.86□□□□□ -0.03
TRAF3-207ENST00000559734 TM4SF1P30408 202 aa14.85□□□□□ -0.03
TRAF3-207ENST00000559734 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
TRAF3-207ENST00000559734 DNAJC10Q8IXB1 793 aa14.85□□□□□ -0.03
TRAF3-207ENST00000559734 TJP1Q07157 1748 aa14.85□□□□□ -0.03
TRAF3-207ENST00000559734 NFIXQ14938 502 aa14.84□□□□□ -0.03
TRAF3-207ENST00000559734 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms