RNA–Protein interactions for RNA: ENST00000559729.5

SEC11A-208, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11A, Length 1,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-208ENST00000559729 KDRP35968 1356 aa28.69■■■□□ 2.18
SEC11A-208ENST00000559729 HSP90AB1P08238 724 aaKnown RBP28.68■■■□□ 2.18
SEC11A-208ENST00000559729 ERVV-2B6SEH9 535 aa28.67■■■□□ 2.18
SEC11A-208ENST00000559729 PHF14O94880 888 aa28.67■■■□□ 2.18
SEC11A-208ENST00000559729 HMGB2P26583 209 aaKnown RBP28.67■■■□□ 2.18
SEC11A-208ENST00000559729 ATP6V1AP38606 617 aa28.67■■■□□ 2.18
SEC11A-208ENST00000559729 GOLGB1Q14789 3259 aaKnown RBP28.67■■■□□ 2.18
SEC11A-208ENST00000559729 UBR3Q6ZT12 1888 aa28.66■■■□□ 2.18
SEC11A-208ENST00000559729 FLAD1Q8NFF5 587 aa28.66■■■□□ 2.18
SEC11A-208ENST00000559729 C1orf141Q5JVX7 400 aa28.64■■■□□ 2.18
SEC11A-208ENST00000559729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.63■■■□□ 2.17
SEC11A-208ENST00000559729 HMOX1P09601 288 aa28.63■■■□□ 2.17
SEC11A-208ENST00000559729 CABP4P57796 275 aa28.63■■■□□ 2.17
SEC11A-208ENST00000559729 NLGN2Q8NFZ4 835 aa28.63■■■□□ 2.17
SEC11A-208ENST00000559729 SLC4A9Q96Q91 983 aa28.63■■■□□ 2.17
SEC11A-208ENST00000559729 RBM42Q9BTD8 480 aaKnown RBP28.61■■■□□ 2.17
SEC11A-208ENST00000559729 GNPATO15228 680 aa28.6■■■□□ 2.17
SEC11A-208ENST00000559729 NPC1L1Q9UHC9 1359 aa28.6■■■□□ 2.17
SEC11A-208ENST00000559729 DIAPH1O60610 1272 aaKnown RBP28.59■■■□□ 2.17
SEC11A-208ENST00000559729 SSFA2P28290 1259 aa28.59■■■□□ 2.17
SEC11A-208ENST00000559729 GPR162Q16538 588 aa28.57■■■□□ 2.16
SEC11A-208ENST00000559729 NFATC2IPQ8NCF5 419 aa28.57■■■□□ 2.16
SEC11A-208ENST00000559729 COL3A1P02461 1466 aaPredicted RBP28.56■■■□□ 2.16
SEC11A-208ENST00000559729 PELP1Q8IZL8 1130 aaKnown RBP28.56■■■□□ 2.16
SEC11A-208ENST00000559729 SCN11AQ9UI33 1791 aa28.55■■■□□ 2.16
SEC11A-208ENST00000559729 AKAP4Q5JQC9 854 aa28.54■■■□□ 2.16
SEC11A-208ENST00000559729 ZNF831Q5JPB2 1677 aa28.54■■■□□ 2.16
SEC11A-208ENST00000559729 COL5A3P25940 1745 aaPredicted RBP28.53■■■□□ 2.16
SEC11A-208ENST00000559729 PTCD1O75127 700 aaKnown RBP28.53■■■□□ 2.16
SEC11A-208ENST00000559729 LGR6Q9HBX8 967 aa28.52■■■□□ 2.16
SEC11A-208ENST00000559729 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.15
SEC11A-208ENST00000559729 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
SEC11A-208ENST00000559729 RTCBQ9Y3I0 505 aaKnown RBP28.49■■■□□ 2.15
SEC11A-208ENST00000559729 CHD4Q14839 1912 aa28.47■■■□□ 2.15
SEC11A-208ENST00000559729 CNTNAP4Q9C0A0 1308 aa28.47■■■□□ 2.15
SEC11A-208ENST00000559729 RNMTO43148 476 aaKnown RBP28.47■■■□□ 2.15
SEC11A-208ENST00000559729 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
SEC11A-208ENST00000559729 SLC52A2Q9HAB3 445 aa28.47■■■□□ 2.15
SEC11A-208ENST00000559729 CD2APQ9Y5K6 639 aa28.47■■■□□ 2.15
SEC11A-208ENST00000559729 YBX3P16989 372 aaKnown RBP eCLIP28.46■■■□□ 2.152e-6■■□□□ 14.2
SEC11A-208ENST00000559729 RC3H1Q5TC82 1133 aaKnown RBP28.46■■■□□ 2.15
SEC11A-208ENST00000559729 VIRMAQ69YN4 1812 aaKnown RBP28.46■■■□□ 2.15
SEC11A-208ENST00000559729 MYH14Q7Z406 1995 aaKnown RBP28.45■■■□□ 2.14
SEC11A-208ENST00000559729 TJP1Q07157 1748 aa28.45■■■□□ 2.14
SEC11A-208ENST00000559729 MRC1P22897 1456 aa28.45■■■□□ 2.14
SEC11A-208ENST00000559729 ARHGEF1Q92888 912 aaKnown RBP28.44■■■□□ 2.14
SEC11A-208ENST00000559729 RPS6KA4O75676 772 aa28.43■■■□□ 2.14
SEC11A-208ENST00000559729 SLC39A6Q13433 755 aa28.42■■■□□ 2.14
SEC11A-208ENST00000559729 ZNF784Q8NCA9 323 aaPredicted RBP28.42■■■□□ 2.14
SEC11A-208ENST00000559729 ADAMTS7Q9UKP4 1686 aa28.42■■■□□ 2.14
SEC11A-208ENST00000559729 MMP10P09238 476 aa28.41■■■□□ 2.14
SEC11A-208ENST00000559729 CRKLP46109 303 aaKnown RBP28.41■■■□□ 2.14
SEC11A-208ENST00000559729 CICQ96RK0 1608 aaPredicted RBP28.4■■■□□ 2.14
SEC11A-208ENST00000559729 C4AP0C0L4 1744 aa28.39■■■□□ 2.14
SEC11A-208ENST00000559729 ADRA2BP18089 450 aa28.39■■■□□ 2.14
SEC11A-208ENST00000559729 WWC3Q9ULE0 1092 aa28.39■■■□□ 2.14
SEC11A-208ENST00000559729 PPP2R1AP30153 589 aa28.38■■■□□ 2.13
SEC11A-208ENST00000559729 RFC4P35249 363 aa28.38■■■□□ 2.13
SEC11A-208ENST00000559729 DNAJC10Q8IXB1 793 aa28.38■■■□□ 2.13
SEC11A-208ENST00000559729 CFAP53Q96M91 514 aa28.38■■■□□ 2.13
SEC11A-208ENST00000559729 GYS1P13807 737 aa28.37■■■□□ 2.13
SEC11A-208ENST00000559729 KCPQ6ZWJ8 1503 aa28.37■■■□□ 2.13
SEC11A-208ENST00000559729 NLGN1Q8N2Q7 840 aa28.36■■■□□ 2.13
SEC11A-208ENST00000559729 GRIN3BO60391 1043 aa28.35■■■□□ 2.13
SEC11A-208ENST00000559729 INTS5Q6P9B9 1019 aaKnown RBP28.35■■■□□ 2.13
SEC11A-208ENST00000559729 GAS2L2Q8NHY3 880 aa28.34■■■□□ 2.13
SEC11A-208ENST00000559729 SRP68Q9UHB9 627 aaKnown RBP28.34■■■□□ 2.13
SEC11A-208ENST00000559729 PRKAR2BP31323 418 aa28.33■■■□□ 2.13
SEC11A-208ENST00000559729 IL17REQ8NFR9 667 aa28.33■■■□□ 2.13
SEC11A-208ENST00000559729 PHACTR3Q96KR7 559 aa28.33■■■□□ 2.13
SEC11A-208ENST00000559729 RSPH6AQ9H0K4 717 aa28.33■■■□□ 2.13
SEC11A-208ENST00000559729 GNAT3A8MTJ3 354 aa28.31■■■□□ 2.12
SEC11A-208ENST00000559729 CYP19A1P11511 503 aaPredicted RBP28.3■■■□□ 2.12
SEC11A-208ENST00000559729 CCDC87Q9NVE4 849 aa28.3■■■□□ 2.12
SEC11A-208ENST00000559729 USP42Q9H9J4 1324 aaKnown RBP28.29■■■□□ 2.12
SEC11A-208ENST00000559729 NUDCQ9Y266 331 aa28.29■■■□□ 2.12
SEC11A-208ENST00000559729 UBR2Q8IWV8 1755 aa28.29■■■□□ 2.12
SEC11A-208ENST00000559729 U2AF1L5P0DN76 240 aaPredicted RBP28.28■■■□□ 2.12
SEC11A-208ENST00000559729 U2AF1Q01081 240 aaKnown RBP eCLIP28.28■■■□□ 2.12
SEC11A-208ENST00000559729 FKBP8Q14318 412 aa28.28■■■□□ 2.12
SEC11A-208ENST00000559729 C10orf71Q711Q0 1435 aa28.27■■■□□ 2.12
SEC11A-208ENST00000559729 TEFQ10587 303 aa28.27■■■□□ 2.12
SEC11A-208ENST00000559729 KIF13BQ9NQT8 1826 aa28.27■■■□□ 2.12
SEC11A-208ENST00000559729 PXDNLA1KZ92 1463 aa28.27■■■□□ 2.12
SEC11A-208ENST00000559729 KIAA1551Q9HCM1 1747 aa28.26■■■□□ 2.12
SEC11A-208ENST00000559729 SOS1Q07889 1333 aaPredicted RBP28.26■■■□□ 2.11
SEC11A-208ENST00000559729 TTC5Q8N0Z6 440 aa28.26■■■□□ 2.11
SEC11A-208ENST00000559729 ZBTB1Q9Y2K1 713 aa28.26■■■□□ 2.11
SEC11A-208ENST00000559729 PARP3Q9Y6F1 533 aa28.26■■■□□ 2.11
SEC11A-208ENST00000559729 SIPA1L3O60292 1781 aaPredicted RBP28.26■■■□□ 2.11
SEC11A-208ENST00000559729 N4BP2Q86UW6 1770 aaPredicted RBP28.24■■■□□ 2.11
SEC11A-208ENST00000559729 VSIG10Q8N0Z9 540 aa28.24■■■□□ 2.11
SEC11A-208ENST00000559729 DDR1Q08345 913 aa28.23■■■□□ 2.11
SEC11A-208ENST00000559729 ZNF496Q96IT1 587 aaPredicted RBP28.23■■■□□ 2.11
SEC11A-208ENST00000559729 A0A0G2JLW4 131 aa28.22■■■□□ 2.11
SEC11A-208ENST00000559729 USPL1Q5W0Q7 1092 aa28.22■■■□□ 2.11
SEC11A-208ENST00000559729 ZNF790Q6PG37 636 aa28.22■■■□□ 2.11
SEC11A-208ENST00000559729 CEMIPQ8WUJ3 1361 aa28.22■■■□□ 2.11
SEC11A-208ENST00000559729 COL15A1P39059 1388 aa28.21■■■□□ 2.11
SEC11A-208ENST00000559729 ZPR1O75312 459 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms