RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 MTFR1LQ9H019 292 aa17.3■□□□□ 0.36
BMP4-208ENST00000559642 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
BMP4-208ENST00000559642 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 ITPK1Q13572 414 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 COL24A1Q17RW2 1714 aa17.29■□□□□ 0.36
BMP4-208ENST00000559642 TJP1Q07157 1748 aa17.28■□□□□ 0.36
BMP4-208ENST00000559642 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
BMP4-208ENST00000559642 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
BMP4-208ENST00000559642 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
BMP4-208ENST00000559642 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
BMP4-208ENST00000559642 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
BMP4-208ENST00000559642 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
BMP4-208ENST00000559642 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
BMP4-208ENST00000559642 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.36
BMP4-208ENST00000559642 AK7Q96M32 723 aa17.27■□□□□ 0.36
BMP4-208ENST00000559642 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
BMP4-208ENST00000559642 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
BMP4-208ENST00000559642 SIPA1L3O60292 1781 aaPredicted RBP17.26■□□□□ 0.35
BMP4-208ENST00000559642 MSH5O43196 834 aa17.26■□□□□ 0.35
BMP4-208ENST00000559642 SMIM5Q71RC9 77 aa17.26■□□□□ 0.35
BMP4-208ENST00000559642 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
BMP4-208ENST00000559642 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
BMP4-208ENST00000559642 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
BMP4-208ENST00000559642 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
BMP4-208ENST00000559642 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
BMP4-208ENST00000559642 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
BMP4-208ENST00000559642 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
BMP4-208ENST00000559642 PHF14O94880 888 aa17.24■□□□□ 0.35
BMP4-208ENST00000559642 UBR2Q8IWV8 1755 aa17.24■□□□□ 0.35
BMP4-208ENST00000559642 KCPQ6ZWJ8 1503 aa17.23■□□□□ 0.35
BMP4-208ENST00000559642 RALBP1Q15311 655 aa17.23■□□□□ 0.35
BMP4-208ENST00000559642 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
BMP4-208ENST00000559642 GNPATO15228 680 aa17.22■□□□□ 0.35
BMP4-208ENST00000559642 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
BMP4-208ENST00000559642 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
BMP4-208ENST00000559642 SLC16A10Q8TF71 515 aa17.22■□□□□ 0.35
BMP4-208ENST00000559642 MYH14Q7Z406 1995 aaKnown RBP17.22■□□□□ 0.35
BMP4-208ENST00000559642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
BMP4-208ENST00000559642 FCHSD2O94868 740 aa17.21■□□□□ 0.35
BMP4-208ENST00000559642 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
BMP4-208ENST00000559642 DLG5Q8TDM6 1919 aa17.21■□□□□ 0.35
BMP4-208ENST00000559642 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
BMP4-208ENST00000559642 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
BMP4-208ENST00000559642 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
BMP4-208ENST00000559642 ARXQ96QS3 562 aa17.2■□□□□ 0.34
BMP4-208ENST00000559642 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
BMP4-208ENST00000559642 CNTNAP4Q9C0A0 1308 aa17.19■□□□□ 0.34
BMP4-208ENST00000559642 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
BMP4-208ENST00000559642 SSFA2P28290 1259 aa17.18■□□□□ 0.34
BMP4-208ENST00000559642 POLD1P28340 1107 aa17.18■□□□□ 0.34
BMP4-208ENST00000559642 TEFQ10587 303 aa17.18■□□□□ 0.34
BMP4-208ENST00000559642 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
BMP4-208ENST00000559642 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
BMP4-208ENST00000559642 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
BMP4-208ENST00000559642 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
BMP4-208ENST00000559642 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
BMP4-208ENST00000559642 MCM10Q7L590 875 aa17.15■□□□□ 0.34
BMP4-208ENST00000559642 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
BMP4-208ENST00000559642 PRKRIP1Q9H875 184 aaPredicted RBP17.15■□□□□ 0.34
BMP4-208ENST00000559642 RTCBQ9Y3I0 505 aaKnown RBP17.15■□□□□ 0.34
BMP4-208ENST00000559642 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
BMP4-208ENST00000559642 SYT17Q9BSW7 474 aa17.14■□□□□ 0.33
BMP4-208ENST00000559642 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
BMP4-208ENST00000559642 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
BMP4-208ENST00000559642 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
BMP4-208ENST00000559642 NEFMP07197 916 aa17.12■□□□□ 0.33
BMP4-208ENST00000559642 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
BMP4-208ENST00000559642 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
BMP4-208ENST00000559642 KCNQ3O43525 872 aa17.11■□□□□ 0.33
BMP4-208ENST00000559642 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
BMP4-208ENST00000559642 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
BMP4-208ENST00000559642 ZNF790Q6PG37 636 aa17.11■□□□□ 0.33
BMP4-208ENST00000559642 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
BMP4-208ENST00000559642 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
BMP4-208ENST00000559642 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
BMP4-208ENST00000559642 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
BMP4-208ENST00000559642 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
BMP4-208ENST00000559642 ADRA2BP18089 450 aa17.1■□□□□ 0.33
BMP4-208ENST00000559642 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
BMP4-208ENST00000559642 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
BMP4-208ENST00000559642 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
BMP4-208ENST00000559642 VSIG10Q8N0Z9 540 aa17.09■□□□□ 0.33
BMP4-208ENST00000559642 NLGN2Q8NFZ4 835 aa17.09■□□□□ 0.33
BMP4-208ENST00000559642 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
BMP4-208ENST00000559642 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
BMP4-208ENST00000559642 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
BMP4-208ENST00000559642 RFC4P35249 363 aa17.08■□□□□ 0.32
BMP4-208ENST00000559642 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
BMP4-208ENST00000559642 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
BMP4-208ENST00000559642 SRP68Q9UHB9 627 aaKnown RBP17.08■□□□□ 0.32
BMP4-208ENST00000559642 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
BMP4-208ENST00000559642 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
BMP4-208ENST00000559642 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
BMP4-208ENST00000559642 COL15A1P39059 1388 aa17.06■□□□□ 0.32
BMP4-208ENST00000559642 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
BMP4-208ENST00000559642 MMP10P09238 476 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms