RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
CLPX-205ENST00000559218 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
CLPX-205ENST00000559218 KIF20BQ96Q89 1820 aa12.02□□□□□ -0.49
CLPX-205ENST00000559218 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
CLPX-205ENST00000559218 SIK1P57059 783 aa12.01□□□□□ -0.49
CLPX-205ENST00000559218 ITPK1Q13572 414 aa12.01□□□□□ -0.49
CLPX-205ENST00000559218 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
CLPX-205ENST00000559218 EYA1Q99502 592 aa12.01□□□□□ -0.49
CLPX-205ENST00000559218 WASHC2AQ641Q2 1341 aa12.01□□□□□ -0.49
CLPX-205ENST00000559218 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
CLPX-205ENST00000559218 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
CLPX-205ENST00000559218 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
CLPX-205ENST00000559218 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
CLPX-205ENST00000559218 IGSF1Q8N6C5 1336 aa12□□□□□ -0.49
CLPX-205ENST00000559218 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
CLPX-205ENST00000559218 GNPATO15228 680 aa11.99□□□□□ -0.49
CLPX-205ENST00000559218 SSFA2P28290 1259 aa11.99□□□□□ -0.49
CLPX-205ENST00000559218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.492e-8■■■■□ 23.1
CLPX-205ENST00000559218 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
CLPX-205ENST00000559218 ADCY9O60503 1353 aa11.99□□□□□ -0.49
CLPX-205ENST00000559218 ITGB4P16144 1822 aa11.99□□□□□ -0.49
CLPX-205ENST00000559218 PHKG2P15735 406 aa11.98□□□□□ -0.49
CLPX-205ENST00000559218 ATP6V1AP38606 617 aa11.98□□□□□ -0.49
CLPX-205ENST00000559218 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
CLPX-205ENST00000559218 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
CLPX-205ENST00000559218 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
CLPX-205ENST00000559218 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
CLPX-205ENST00000559218 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
CLPX-205ENST00000559218 IFNL2Q8IZJ0 200 aa11.97□□□□□ -0.49
CLPX-205ENST00000559218 MAP2P11137 1827 aaKnown RBP11.97□□□□□ -0.49
CLPX-205ENST00000559218 MMP10P09238 476 aa11.96□□□□□ -0.49
CLPX-205ENST00000559218 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
CLPX-205ENST00000559218 POLR3GLQ9BT43 218 aa11.96□□□□□ -0.49
CLPX-205ENST00000559218 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
CLPX-205ENST00000559218 KDRP35968 1356 aa11.94□□□□□ -0.5
CLPX-205ENST00000559218 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
CLPX-205ENST00000559218 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
CLPX-205ENST00000559218 PXDNLA1KZ92 1463 aa11.93□□□□□ -0.5
CLPX-205ENST00000559218 A0A0G2JLW4 131 aa11.92□□□□□ -0.5
CLPX-205ENST00000559218 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
CLPX-205ENST00000559218 HSPA6P17066 643 aa11.92□□□□□ -0.5
CLPX-205ENST00000559218 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
CLPX-205ENST00000559218 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
CLPX-205ENST00000559218 KIF3CO14782 793 aa11.91□□□□□ -0.5
CLPX-205ENST00000559218 AEBP1Q8IUX7 1158 aa11.91□□□□□ -0.5
CLPX-205ENST00000559218 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
CLPX-205ENST00000559218 DCAF5Q96JK2 942 aa11.91□□□□□ -0.5
CLPX-205ENST00000559218 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
CLPX-205ENST00000559218 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
CLPX-205ENST00000559218 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 GYS1P13807 737 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 DPEP1P16444 411 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 ZNF530Q6P9A1 599 aaPredicted RBP11.9□□□□□ -0.5
CLPX-205ENST00000559218 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 NLGN1Q8N2Q7 840 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 PANK3Q9H999 370 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 TIMELESSQ9UNS1 1208 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
CLPX-205ENST00000559218 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
CLPX-205ENST00000559218 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
CLPX-205ENST00000559218 CABP4P57796 275 aa11.89□□□□□ -0.51
CLPX-205ENST00000559218 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
CLPX-205ENST00000559218 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
CLPX-205ENST00000559218 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
CLPX-205ENST00000559218 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
CLPX-205ENST00000559218 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
CLPX-205ENST00000559218 RFC4P35249 363 aa11.88□□□□□ -0.51
CLPX-205ENST00000559218 TGFB2P61812 414 aa11.88□□□□□ -0.51
CLPX-205ENST00000559218 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
CLPX-205ENST00000559218 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
CLPX-205ENST00000559218 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
CLPX-205ENST00000559218 MTHFSP49914 203 aa11.87□□□□□ -0.51
CLPX-205ENST00000559218 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
CLPX-205ENST00000559218 CCDC87Q9NVE4 849 aa11.87□□□□□ -0.51
CLPX-205ENST00000559218 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
CLPX-205ENST00000559218 FCHSD2O94868 740 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 KCNA3P22001 575 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
CLPX-205ENST00000559218 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
CLPX-205ENST00000559218 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
CLPX-205ENST00000559218 DDR1Q08345 913 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 FKBP8Q14318 412 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 C4AP0C0L4 1744 aa11.85□□□□□ -0.51
CLPX-205ENST00000559218 COL5A3P25940 1745 aaPredicted RBP11.85□□□□□ -0.51
CLPX-205ENST00000559218 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
CLPX-205ENST00000559218 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLPX-205ENST00000559218 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
CLPX-205ENST00000559218 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
CLPX-205ENST00000559218 TOMM70O94826 608 aa11.83□□□□□ -0.52
CLPX-205ENST00000559218 IL13P35225 146 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms