RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CYP27B1O15528 508 aa16.29■□□□□ 0.2
TPM1-216ENST00000558910 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
TPM1-216ENST00000558910 MTHFSP49914 203 aa16.29■□□□□ 0.2
TPM1-216ENST00000558910 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
TPM1-216ENST00000558910 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
TPM1-216ENST00000558910 GSE1Q14687 1217 aa16.28■□□□□ 0.2
TPM1-216ENST00000558910 STK32BQ9NY57 414 aa16.28■□□□□ 0.2
TPM1-216ENST00000558910 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
TPM1-216ENST00000558910 NUP188Q5SRE5 1749 aa16.28■□□□□ 0.2
TPM1-216ENST00000558910 BCL9O00512 1426 aa16.28■□□□□ 0.2
TPM1-216ENST00000558910 PDGFDQ9GZP0 370 aaPredicted RBP16.27■□□□□ 0.2
TPM1-216ENST00000558910 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
TPM1-216ENST00000558910 NHSQ6T4R5 1651 aa16.26■□□□□ 0.19
TPM1-216ENST00000558910 RREB1Q92766 1687 aa16.26■□□□□ 0.19
TPM1-216ENST00000558910 ATMINO43313 823 aaPredicted RBP16.25■□□□□ 0.19
TPM1-216ENST00000558910 HMOX1P09601 288 aa16.25■□□□□ 0.19
TPM1-216ENST00000558910 ASTLQ6HA08 431 aaPredicted RBP16.25■□□□□ 0.19
TPM1-216ENST00000558910 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
TPM1-216ENST00000558910 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
TPM1-216ENST00000558910 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
TPM1-216ENST00000558910 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
TPM1-216ENST00000558910 BTAF1O14981 1849 aa16.24■□□□□ 0.19
TPM1-216ENST00000558910 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
TPM1-216ENST00000558910 IFNL1Q8IU54 200 aa16.24■□□□□ 0.19
TPM1-216ENST00000558910 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
TPM1-216ENST00000558910 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
TPM1-216ENST00000558910 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
TPM1-216ENST00000558910 IL13P35225 146 aa16.23■□□□□ 0.19
TPM1-216ENST00000558910 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
TPM1-216ENST00000558910 SLC15A2Q16348 729 aa16.22■□□□□ 0.19
TPM1-216ENST00000558910 ZNF827Q17R98 1081 aa16.22■□□□□ 0.19
TPM1-216ENST00000558910 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
TPM1-216ENST00000558910 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
TPM1-216ENST00000558910 PHKG2P15735 406 aa16.21■□□□□ 0.19
TPM1-216ENST00000558910 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
TPM1-216ENST00000558910 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
TPM1-216ENST00000558910 CIZ1Q9ULV3 898 aaPredicted RBP16.21■□□□□ 0.19
TPM1-216ENST00000558910 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
TPM1-216ENST00000558910 PPP1R1BQ9UD71 204 aaPredicted RBP16.2■□□□□ 0.18
TPM1-216ENST00000558910 ATN1P54259 1190 aaPredicted RBP16.19■□□□□ 0.18
TPM1-216ENST00000558910 PIGBQ92521 554 aa16.19■□□□□ 0.18
TPM1-216ENST00000558910 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
TPM1-216ENST00000558910 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
TPM1-216ENST00000558910 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
TPM1-216ENST00000558910 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
TPM1-216ENST00000558910 TIE1P35590 1138 aa16.17■□□□□ 0.18
TPM1-216ENST00000558910 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
TPM1-216ENST00000558910 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
TPM1-216ENST00000558910 PALLDQ8WX93 1383 aa16.16■□□□□ 0.18
TPM1-216ENST00000558910 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
TPM1-216ENST00000558910 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
TPM1-216ENST00000558910 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
TPM1-216ENST00000558910 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
TPM1-216ENST00000558910 SLC27A3Q5K4L6 730 aa16.15■□□□□ 0.18
TPM1-216ENST00000558910 LHX8Q68G74 356 aa16.15■□□□□ 0.18
TPM1-216ENST00000558910 PKD1L3Q7Z443 1732 aa16.15■□□□□ 0.18
TPM1-216ENST00000558910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.185e-8■□□□□ 9.2
TPM1-216ENST00000558910 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
TPM1-216ENST00000558910 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
TPM1-216ENST00000558910 CABP4P57796 275 aa16.14■□□□□ 0.17
TPM1-216ENST00000558910 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
TPM1-216ENST00000558910 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
TPM1-216ENST00000558910 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
TPM1-216ENST00000558910 PCDHB8Q9UN66 801 aa16.14■□□□□ 0.17
TPM1-216ENST00000558910 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
TPM1-216ENST00000558910 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
TPM1-216ENST00000558910 PHF14O94880 888 aa16.12■□□□□ 0.17
TPM1-216ENST00000558910 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
TPM1-216ENST00000558910 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
TPM1-216ENST00000558910 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
TPM1-216ENST00000558910 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
TPM1-216ENST00000558910 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
TPM1-216ENST00000558910 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
TPM1-216ENST00000558910 ITGB4P16144 1822 aa16.1■□□□□ 0.17
TPM1-216ENST00000558910 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
TPM1-216ENST00000558910 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
TPM1-216ENST00000558910 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
TPM1-216ENST00000558910 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
TPM1-216ENST00000558910 AK7Q96M32 723 aa16.1■□□□□ 0.17
TPM1-216ENST00000558910 LGR6Q9HBX8 967 aa16.1■□□□□ 0.17
TPM1-216ENST00000558910 PNPLA7Q6ZV29 1317 aa16.1■□□□□ 0.17
TPM1-216ENST00000558910 LRP5O75197 1615 aa16.09■□□□□ 0.17
TPM1-216ENST00000558910 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
TPM1-216ENST00000558910 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
TPM1-216ENST00000558910 CHRM1P11229 460 aaPredicted RBP16.09■□□□□ 0.17
TPM1-216ENST00000558910 SIK1P57059 783 aa16.09■□□□□ 0.17
TPM1-216ENST00000558910 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
TPM1-216ENST00000558910 ITPK1Q13572 414 aa16.08■□□□□ 0.16
TPM1-216ENST00000558910 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
TPM1-216ENST00000558910 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
TPM1-216ENST00000558910 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
TPM1-216ENST00000558910 KDRP35968 1356 aa16.08■□□□□ 0.16
TPM1-216ENST00000558910 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
TPM1-216ENST00000558910 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
TPM1-216ENST00000558910 PRKAR2BP31323 418 aa16.07■□□□□ 0.16
TPM1-216ENST00000558910 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
TPM1-216ENST00000558910 SLC39A7Q92504 469 aa16.07■□□□□ 0.16
TPM1-216ENST00000558910 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
TPM1-216ENST00000558910 METRNQ9UJH8 293 aa16.07■□□□□ 0.16
TPM1-216ENST00000558910 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms