RNA–Protein interactions for RNA: ENST00000558859.5

CPNE6-209, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-209ENST00000558859 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
CPNE6-209ENST00000558859 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
CPNE6-209ENST00000558859 GNPATO15228 680 aa20.26■□□□□ 0.83
CPNE6-209ENST00000558859 HTRA3P83110 453 aa20.26■□□□□ 0.83
CPNE6-209ENST00000558859 SBF1O95248 1867 aa20.26■□□□□ 0.83
CPNE6-209ENST00000558859 PRELPP51888 382 aa20.25■□□□□ 0.83
CPNE6-209ENST00000558859 ARHGAP27Q6ZUM4 889 aa20.25■□□□□ 0.83
CPNE6-209ENST00000558859 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
CPNE6-209ENST00000558859 ASAP1Q9ULH1 1129 aa20.25■□□□□ 0.83
CPNE6-209ENST00000558859 C4AP0C0L4 1744 aa20.24■□□□□ 0.83
CPNE6-209ENST00000558859 PLEKHG2Q9H7P9 1386 aa20.24■□□□□ 0.83
CPNE6-209ENST00000558859 DPEP1P16444 411 aa20.24■□□□□ 0.83
CPNE6-209ENST00000558859 KCNA3P22001 575 aa20.24■□□□□ 0.83
CPNE6-209ENST00000558859 NLGN1Q8N2Q7 840 aa20.24■□□□□ 0.83
CPNE6-209ENST00000558859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.23■□□□□ 0.83
CPNE6-209ENST00000558859 KDRP35968 1356 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 TMF1P82094 1093 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 ATG3Q9NT62 314 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 MYH14Q7Z406 1995 aaKnown RBP20.22■□□□□ 0.83
CPNE6-209ENST00000558859 KIF20BQ96Q89 1820 aa20.22■□□□□ 0.83
CPNE6-209ENST00000558859 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
CPNE6-209ENST00000558859 TMOD3Q9NYL9 352 aa20.21■□□□□ 0.83
CPNE6-209ENST00000558859 COL5A3P25940 1745 aaPredicted RBP20.2■□□□□ 0.82
CPNE6-209ENST00000558859 ANKRD26Q9UPS8 1709 aa20.2■□□□□ 0.82
CPNE6-209ENST00000558859 ST20-MTHFSA0A0A6YYL1 179 aa20.2■□□□□ 0.82
CPNE6-209ENST00000558859 FCHSD2O94868 740 aa20.2■□□□□ 0.82
CPNE6-209ENST00000558859 ADRA2BP18089 450 aa20.2■□□□□ 0.82
CPNE6-209ENST00000558859 TRAPPC3LQ5T215 181 aa20.2■□□□□ 0.82
CPNE6-209ENST00000558859 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
CPNE6-209ENST00000558859 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
CPNE6-209ENST00000558859 KCPQ6ZWJ8 1503 aa20.19■□□□□ 0.82
CPNE6-209ENST00000558859 GYS1P13807 737 aa20.19■□□□□ 0.82
CPNE6-209ENST00000558859 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
CPNE6-209ENST00000558859 TNS4Q8IZW8 715 aa20.19■□□□□ 0.82
CPNE6-209ENST00000558859 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
CPNE6-209ENST00000558859 SLC4A9Q96Q91 983 aa20.19■□□□□ 0.82
CPNE6-209ENST00000558859 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
CPNE6-209ENST00000558859 C16orf71Q8IYS4 520 aaPredicted RBP20.18■□□□□ 0.82
CPNE6-209ENST00000558859 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
CPNE6-209ENST00000558859 RTCBQ9Y3I0 505 aaKnown RBP20.18■□□□□ 0.82
CPNE6-209ENST00000558859 KDM2BQ8NHM5 1336 aa20.17■□□□□ 0.82
CPNE6-209ENST00000558859 CAPN15O75808 1086 aa20.16■□□□□ 0.82
CPNE6-209ENST00000558859 PHKG2P15735 406 aa20.16■□□□□ 0.82
CPNE6-209ENST00000558859 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
CPNE6-209ENST00000558859 PIM2Q9P1W9 311 aa20.15■□□□□ 0.82
CPNE6-209ENST00000558859 EMILIN1Q9Y6C2 1016 aa20.15■□□□□ 0.82
CPNE6-209ENST00000558859 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
CPNE6-209ENST00000558859 RPS6KA4O75676 772 aa20.14■□□□□ 0.81
CPNE6-209ENST00000558859 EYA1Q99502 592 aa20.14■□□□□ 0.81
CPNE6-209ENST00000558859 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
CPNE6-209ENST00000558859 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
CPNE6-209ENST00000558859 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
CPNE6-209ENST00000558859 PARP3Q9Y6F1 533 aa20.13■□□□□ 0.81
CPNE6-209ENST00000558859 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
CPNE6-209ENST00000558859 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
CPNE6-209ENST00000558859 RNF181Q9P0P0 153 aa20.11■□□□□ 0.81
CPNE6-209ENST00000558859 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
CPNE6-209ENST00000558859 RFC4P35249 363 aa20.1■□□□□ 0.81
CPNE6-209ENST00000558859 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
CPNE6-209ENST00000558859 ERVV-2B6SEH9 535 aa20.09■□□□□ 0.81
CPNE6-209ENST00000558859 HSPA1AP0DMV8 641 aaKnown RBP20.08■□□□□ 0.81
CPNE6-209ENST00000558859 HSPA1BP0DMV9 641 aaKnown RBP20.08■□□□□ 0.81
CPNE6-209ENST00000558859 DDR1Q08345 913 aa20.08■□□□□ 0.81
CPNE6-209ENST00000558859 ADAMTS7Q9UKP4 1686 aa20.07■□□□□ 0.8
CPNE6-209ENST00000558859 USP42Q9H9J4 1324 aaKnown RBP20.05■□□□□ 0.8
CPNE6-209ENST00000558859 CCDC88AQ3V6T2 1871 aa20.05■□□□□ 0.8
CPNE6-209ENST00000558859 FKBP8Q14318 412 aa20.05■□□□□ 0.8
CPNE6-209ENST00000558859 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
CPNE6-209ENST00000558859 TM4SF1P30408 202 aa20.04■□□□□ 0.8
CPNE6-209ENST00000558859 CHRNA5P30532 468 aa20.04■□□□□ 0.8
CPNE6-209ENST00000558859 GLTPD2A6NH11 291 aa20.03■□□□□ 0.8
CPNE6-209ENST00000558859 VEGFAP15692 232 aaPredicted RBP20.03■□□□□ 0.8
CPNE6-209ENST00000558859 POLRMTO00411 1230 aaKnown RBP20.02■□□□□ 0.8
CPNE6-209ENST00000558859 POLKQ9UBT6 870 aa20.02■□□□□ 0.8
CPNE6-209ENST00000558859 SRP68Q9UHB9 627 aaKnown RBP20.02■□□□□ 0.8
CPNE6-209ENST00000558859 DLEC1Q9Y238 1755 aa20.02■□□□□ 0.8
CPNE6-209ENST00000558859 AFDNP55196 1824 aaKnown RBP20.02■□□□□ 0.79
CPNE6-209ENST00000558859 PPM1GO15355 546 aaPredicted RBP20.01■□□□□ 0.79
CPNE6-209ENST00000558859 TJP1Q07157 1748 aa20.01■□□□□ 0.79
CPNE6-209ENST00000558859 NRXN2Q9P2S2 1712 aa20.01■□□□□ 0.79
CPNE6-209ENST00000558859 POTECB2RU33 542 aa20■□□□□ 0.79
CPNE6-209ENST00000558859 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
CPNE6-209ENST00000558859 CRKLP46109 303 aaKnown RBP20■□□□□ 0.79
CPNE6-209ENST00000558859 LMNB1P20700 586 aa19.99■□□□□ 0.79
CPNE6-209ENST00000558859 RASSF7Q02833 373 aa19.99■□□□□ 0.79
CPNE6-209ENST00000558859 EIF4A2Q14240 407 aaKnown RBP19.99■□□□□ 0.79
CPNE6-209ENST00000558859 CDCA8Q53HL2 280 aa19.98■□□□□ 0.79
CPNE6-209ENST00000558859 TIAM2Q8IVF5 1701 aa19.98■□□□□ 0.79
CPNE6-209ENST00000558859 INTS5Q6P9B9 1019 aaKnown RBP19.97■□□□□ 0.79
CPNE6-209ENST00000558859 DICER1Q9UPY3 1922 aaKnown RBP19.97■□□□□ 0.79
CPNE6-209ENST00000558859 CABP4P57796 275 aa19.95■□□□□ 0.78
CPNE6-209ENST00000558859 PTCD1O75127 700 aaKnown RBP19.94■□□□□ 0.78
CPNE6-209ENST00000558859 SLC34A2O95436 690 aa19.94■□□□□ 0.78
CPNE6-209ENST00000558859 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
CPNE6-209ENST00000558859 NFKBIEO00221 500 aa19.92■□□□□ 0.78
CPNE6-209ENST00000558859 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
CPNE6-209ENST00000558859 SCN11AQ9UI33 1791 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms