RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 USP35Q9P2H5 1018 aa14.08□□□□□ -0.16
SPG11-212ENST00000558790 COL18A1P39060 1754 aa14.08□□□□□ -0.16
SPG11-212ENST00000558790 USP19O94966 1318 aa14.08□□□□□ -0.16
SPG11-212ENST00000558790 CPDO75976 1380 aa14.08□□□□□ -0.16
SPG11-212ENST00000558790 COL5A2P05997 1499 aaPredicted RBP14.07□□□□□ -0.16
SPG11-212ENST00000558790 GIGYF1O75420 1035 aaPredicted RBP14.07□□□□□ -0.16
SPG11-212ENST00000558790 ZBTB7AO95365 584 aa14.07□□□□□ -0.16
SPG11-212ENST00000558790 FAM196AQ6ZSG2 479 aa14.07□□□□□ -0.16
SPG11-212ENST00000558790 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
SPG11-212ENST00000558790 SLIT3O75094 1523 aa14.06□□□□□ -0.16
SPG11-212ENST00000558790 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
SPG11-212ENST00000558790 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
SPG11-212ENST00000558790 LARP1Q6PKG0 1096 aaKnown RBP14.05□□□□□ -0.16
SPG11-212ENST00000558790 BARGINQ6ZT62 677 aa14.05□□□□□ -0.16
SPG11-212ENST00000558790 FHDC1Q9C0D6 1143 aaPredicted RBP14.05□□□□□ -0.16
SPG11-212ENST00000558790 PLEKHG3A1L390 1219 aa14.04□□□□□ -0.16
SPG11-212ENST00000558790 OSBPP22059 807 aa14.04□□□□□ -0.16
SPG11-212ENST00000558790 SYT17Q9BSW7 474 aa14.04□□□□□ -0.16
SPG11-212ENST00000558790 TRPM1Q7Z4N2 1603 aa14.04□□□□□ -0.16
SPG11-212ENST00000558790 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
SPG11-212ENST00000558790 EVA1CP58658 441 aa14.02□□□□□ -0.17
SPG11-212ENST00000558790 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.17
SPG11-212ENST00000558790 USP6P35125 1406 aa14.01□□□□□ -0.17
SPG11-212ENST00000558790 CRB1P82279 1406 aa14.01□□□□□ -0.17
SPG11-212ENST00000558790 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
SPG11-212ENST00000558790 NBPF1Q3BBV0 1214 aa14.01□□□□□ -0.17
SPG11-212ENST00000558790 ZC3H15Q8WU90 426 aaKnown RBP14.01□□□□□ -0.17
SPG11-212ENST00000558790 OVOS2A0A0G2JMS6 1433 aa14□□□□□ -0.17
SPG11-212ENST00000558790 OVOS2A0A0J9YW53 1432 aa14□□□□□ -0.17
SPG11-212ENST00000558790 OVOS2Q6IE36 1432 aa14□□□□□ -0.17
SPG11-212ENST00000558790 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
SPG11-212ENST00000558790 PCDHGA10Q9Y5H3 936 aa14□□□□□ -0.17
SPG11-212ENST00000558790 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
SPG11-212ENST00000558790 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
SPG11-212ENST00000558790 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
SPG11-212ENST00000558790 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
SPG11-212ENST00000558790 LHX6Q9UPM6 363 aa13.99□□□□□ -0.17
SPG11-212ENST00000558790 LTN1O94822 1766 aa13.99□□□□□ -0.17
SPG11-212ENST00000558790 PHF14O94880 888 aa13.98□□□□□ -0.17
SPG11-212ENST00000558790 GCP02774 474 aa13.98□□□□□ -0.17
SPG11-212ENST00000558790 PTF1AQ7RTS3 328 aa13.98□□□□□ -0.17
SPG11-212ENST00000558790 THRAP3Q9Y2W1 955 aaKnown RBP13.98□□□□□ -0.17
SPG11-212ENST00000558790 BRD4O60885 1362 aaPredicted RBP13.97□□□□□ -0.17
SPG11-212ENST00000558790 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
SPG11-212ENST00000558790 ZNF454Q8N9F8 522 aa13.97□□□□□ -0.17
SPG11-212ENST00000558790 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
SPG11-212ENST00000558790 CPSF1Q10570 1443 aaKnown RBP13.97□□□□□ -0.17
SPG11-212ENST00000558790 PCNTO95613 3336 aa13.97□□□□□ -0.17
SPG11-212ENST00000558790 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.17
SPG11-212ENST00000558790 FOSBP53539 338 aa13.96□□□□□ -0.17
SPG11-212ENST00000558790 NFAT5O94916 1531 aa13.95□□□□□ -0.18
SPG11-212ENST00000558790 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
SPG11-212ENST00000558790 ZBTB7CA1YPR0 619 aa13.95□□□□□ -0.18
SPG11-212ENST00000558790 KAT6BQ8WYB5 2073 aa13.95□□□□□ -0.18
SPG11-212ENST00000558790 EPAS1Q99814 870 aa13.94□□□□□ -0.18
SPG11-212ENST00000558790 ST18O60284 1047 aa13.93□□□□□ -0.18
SPG11-212ENST00000558790 TYW1BQ6NUM6 668 aa13.93□□□□□ -0.18
SPG11-212ENST00000558790 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
SPG11-212ENST00000558790 ABCC6O95255 1503 aa13.93□□□□□ -0.18
SPG11-212ENST00000558790 MAP3K7O43318 606 aa13.92□□□□□ -0.18
SPG11-212ENST00000558790 CDHR5Q9HBB8 845 aa13.92□□□□□ -0.18
SPG11-212ENST00000558790 BTAF1O14981 1849 aa13.92□□□□□ -0.18
SPG11-212ENST00000558790 GPR37O15354 613 aa13.91□□□□□ -0.18
SPG11-212ENST00000558790 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.18
SPG11-212ENST00000558790 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
SPG11-212ENST00000558790 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
SPG11-212ENST00000558790 DDB1Q16531 1140 aa13.9□□□□□ -0.18
SPG11-212ENST00000558790 GPR162Q16538 588 aa13.9□□□□□ -0.18
SPG11-212ENST00000558790 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.18
SPG11-212ENST00000558790 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
SPG11-212ENST00000558790 FAM163AQ96GL9 167 aaPredicted RBP13.9□□□□□ -0.18
SPG11-212ENST00000558790 AXIN2Q9Y2T1 843 aa13.9□□□□□ -0.18
SPG11-212ENST00000558790 BCL9O00512 1426 aa13.9□□□□□ -0.19
SPG11-212ENST00000558790 HSPA6P17066 643 aa13.89□□□□□ -0.19
SPG11-212ENST00000558790 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
SPG11-212ENST00000558790 TNS2Q63HR2 1409 aa13.89□□□□□ -0.19
SPG11-212ENST00000558790 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
SPG11-212ENST00000558790 PLSCR1O15162 318 aa13.88□□□□□ -0.19
SPG11-212ENST00000558790 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
SPG11-212ENST00000558790 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
SPG11-212ENST00000558790 ZMYND10O75800 440 aa13.87□□□□□ -0.19
SPG11-212ENST00000558790 MARCH10Q8NA82 808 aaPredicted RBP13.87□□□□□ -0.19
SPG11-212ENST00000558790 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
SPG11-212ENST00000558790 MARVELD3Q96A59 401 aa13.87□□□□□ -0.19
SPG11-212ENST00000558790 ARXQ96QS3 562 aa13.87□□□□□ -0.19
SPG11-212ENST00000558790 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
SPG11-212ENST00000558790 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
SPG11-212ENST00000558790 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
SPG11-212ENST00000558790 ARHGEF25Q86VW2 580 aa13.86□□□□□ -0.19
SPG11-212ENST00000558790 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
SPG11-212ENST00000558790 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
SPG11-212ENST00000558790 QSER1Q2KHR3 1735 aa13.86□□□□□ -0.19
SPG11-212ENST00000558790 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
SPG11-212ENST00000558790 ATP10DQ9P241 1426 aa13.85□□□□□ -0.19
SPG11-212ENST00000558790 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
SPG11-212ENST00000558790 TTC21AQ8NDW8 1320 aa13.85□□□□□ -0.19
SPG11-212ENST00000558790 SLC15A2Q16348 729 aa13.84□□□□□ -0.19
SPG11-212ENST00000558790 COL13A1Q5TAT6 717 aaPredicted RBP13.84□□□□□ -0.19
SPG11-212ENST00000558790 KCNH5Q8NCM2 988 aa13.84□□□□□ -0.19
SPG11-212ENST00000558790 CDCA7Q9BWT1 371 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms