RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 C4BP0C0L5 1744 aa20.91■□□□□ 0.94
CSHL1-208ENST00000558609 CABP4P57796 275 aa20.91■□□□□ 0.94
CSHL1-208ENST00000558609 POLD1P28340 1107 aa20.9■□□□□ 0.94
CSHL1-208ENST00000558609 AKAP4Q5JQC9 854 aa20.9■□□□□ 0.94
CSHL1-208ENST00000558609 MAP3K5Q99683 1374 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 MSH5O43196 834 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 ATP6V1AP38606 617 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 C1QTNF8P60827 252 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 ITPK1Q13572 414 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 AK7Q96M32 723 aa20.89■□□□□ 0.93
CSHL1-208ENST00000558609 SENP3-EIF4A1A0A087X0R7 540 aa20.87■□□□□ 0.93
CSHL1-208ENST00000558609 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
CSHL1-208ENST00000558609 MTHFSDQ2M296 383 aaKnown RBP20.86■□□□□ 0.93
CSHL1-208ENST00000558609 AMIGO3Q86WK7 504 aa20.86■□□□□ 0.93
CSHL1-208ENST00000558609 SLC4A9Q96Q91 983 aa20.86■□□□□ 0.93
CSHL1-208ENST00000558609 ZNF831Q5JPB2 1677 aa20.86■□□□□ 0.93
CSHL1-208ENST00000558609 U2SURPO15042 1029 aaKnown RBP20.85■□□□□ 0.93
CSHL1-208ENST00000558609 PPP2R1AP30153 589 aa20.85■□□□□ 0.93
CSHL1-208ENST00000558609 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
CSHL1-208ENST00000558609 UBR3Q6ZT12 1888 aa20.85■□□□□ 0.93
CSHL1-208ENST00000558609 SCN11AQ9UI33 1791 aa20.85■□□□□ 0.93
CSHL1-208ENST00000558609 SSFA2P28290 1259 aa20.84■□□□□ 0.93
CSHL1-208ENST00000558609 RBM42Q9BTD8 480 aaKnown RBP20.84■□□□□ 0.93
CSHL1-208ENST00000558609 LGR6Q9HBX8 967 aa20.84■□□□□ 0.93
CSHL1-208ENST00000558609 GOLGB1Q14789 3259 aaKnown RBP20.84■□□□□ 0.93
CSHL1-208ENST00000558609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.83■□□□□ 0.93
CSHL1-208ENST00000558609 RNMTO43148 476 aaKnown RBP20.83■□□□□ 0.93
CSHL1-208ENST00000558609 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
CSHL1-208ENST00000558609 GPR162Q16538 588 aa20.82■□□□□ 0.92
CSHL1-208ENST00000558609 GNPATO15228 680 aa20.81■□□□□ 0.92
CSHL1-208ENST00000558609 PHF14O94880 888 aa20.81■□□□□ 0.92
CSHL1-208ENST00000558609 RC3H1Q5TC82 1133 aaKnown RBP20.81■□□□□ 0.92
CSHL1-208ENST00000558609 MSL1Q68DK7 614 aa20.81■□□□□ 0.92
CSHL1-208ENST00000558609 SMIM5Q71RC9 77 aa20.81■□□□□ 0.92
CSHL1-208ENST00000558609 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
CSHL1-208ENST00000558609 PTCD1O75127 700 aaKnown RBP20.79■□□□□ 0.92
CSHL1-208ENST00000558609 MRC1P22897 1456 aa20.79■□□□□ 0.92
CSHL1-208ENST00000558609 ADAMTS7Q9UKP4 1686 aa20.79■□□□□ 0.92
CSHL1-208ENST00000558609 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
CSHL1-208ENST00000558609 KLHL34Q8N239 644 aa20.78■□□□□ 0.92
CSHL1-208ENST00000558609 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
CSHL1-208ENST00000558609 NLGN2Q8NFZ4 835 aa20.77■□□□□ 0.92
CSHL1-208ENST00000558609 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
CSHL1-208ENST00000558609 RTCBQ9Y3I0 505 aaKnown RBP20.77■□□□□ 0.92
CSHL1-208ENST00000558609 COL5A3P25940 1745 aaPredicted RBP20.77■□□□□ 0.92
CSHL1-208ENST00000558609 TRAPPC3LQ5T215 181 aa20.76■□□□□ 0.91
CSHL1-208ENST00000558609 VIRMAQ69YN4 1812 aaKnown RBP20.76■□□□□ 0.91
CSHL1-208ENST00000558609 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
CSHL1-208ENST00000558609 RPS6KA4O75676 772 aa20.75■□□□□ 0.91
CSHL1-208ENST00000558609 ADRA2BP18089 450 aa20.75■□□□□ 0.91
CSHL1-208ENST00000558609 PRKAR2BP31323 418 aa20.75■□□□□ 0.91
CSHL1-208ENST00000558609 U2AF1L5P0DN76 240 aaPredicted RBP20.74■□□□□ 0.91
CSHL1-208ENST00000558609 U2AF1Q01081 240 aaKnown RBP eCLIP20.74■□□□□ 0.91
CSHL1-208ENST00000558609 PHACTR3Q96KR7 559 aa20.74■□□□□ 0.91
CSHL1-208ENST00000558609 CICQ96RK0 1608 aaPredicted RBP20.74■□□□□ 0.91
CSHL1-208ENST00000558609 CHD4Q14839 1912 aa20.73■□□□□ 0.91
CSHL1-208ENST00000558609 FCHSD2O94868 740 aa20.73■□□□□ 0.91
CSHL1-208ENST00000558609 CRKLP46109 303 aaKnown RBP20.73■□□□□ 0.91
CSHL1-208ENST00000558609 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
CSHL1-208ENST00000558609 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
CSHL1-208ENST00000558609 IL17REQ8NFR9 667 aa20.73■□□□□ 0.91
CSHL1-208ENST00000558609 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
CSHL1-208ENST00000558609 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
CSHL1-208ENST00000558609 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
CSHL1-208ENST00000558609 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
CSHL1-208ENST00000558609 TJP1Q07157 1748 aa20.71■□□□□ 0.91
CSHL1-208ENST00000558609 CEP350Q5VT06 3117 aa20.71■□□□□ 0.91
CSHL1-208ENST00000558609 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.9
CSHL1-208ENST00000558609 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 RFC4P35249 363 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 TEFQ10587 303 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
CSHL1-208ENST00000558609 DNAJC10Q8IXB1 793 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 VSIG10Q8N0Z9 540 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 NLGN1Q8N2Q7 840 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 CEMIPQ8WUJ3 1361 aa20.69■□□□□ 0.9
CSHL1-208ENST00000558609 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
CSHL1-208ENST00000558609 GYS1P13807 737 aa20.67■□□□□ 0.9
CSHL1-208ENST00000558609 DDX10Q13206 875 aaKnown RBP20.67■□□□□ 0.9
CSHL1-208ENST00000558609 MMP10P09238 476 aa20.66■□□□□ 0.9
CSHL1-208ENST00000558609 RALBP1Q15311 655 aa20.66■□□□□ 0.9
CSHL1-208ENST00000558609 TTC5Q8N0Z6 440 aa20.66■□□□□ 0.9
CSHL1-208ENST00000558609 CCDC87Q9NVE4 849 aa20.66■□□□□ 0.9
CSHL1-208ENST00000558609 UBR2Q8IWV8 1755 aa20.66■□□□□ 0.9
CSHL1-208ENST00000558609 SIPA1L3O60292 1781 aaPredicted RBP20.65■□□□□ 0.9
CSHL1-208ENST00000558609 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
CSHL1-208ENST00000558609 IFFO2Q5TF58 517 aa20.64■□□□□ 0.89
CSHL1-208ENST00000558609 C4AP0C0L4 1744 aa20.64■□□□□ 0.89
CSHL1-208ENST00000558609 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
CSHL1-208ENST00000558609 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
CSHL1-208ENST00000558609 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
CSHL1-208ENST00000558609 USP42Q9H9J4 1324 aaKnown RBP20.62■□□□□ 0.89
CSHL1-208ENST00000558609 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
CSHL1-208ENST00000558609 RTF1Q92541 710 aaKnown RBP20.62■□□□□ 0.89
CSHL1-208ENST00000558609 TEX13AQ9BXU3 409 aaPredicted RBP20.61■□□□□ 0.89
CSHL1-208ENST00000558609 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
CSHL1-208ENST00000558609 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
CSHL1-208ENST00000558609 BTBD11A6QL63 1104 aa20.6■□□□□ 0.89
CSHL1-208ENST00000558609 STARD3NLO95772 234 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms