RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 NEFHP12036 1026 aa11.83□□□□□ -0.52
TRPM1-207ENST00000558445 CLCN6P51797 869 aa11.83□□□□□ -0.52
TRPM1-207ENST00000558445 MAP3K11Q16584 847 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.82□□□□□ -0.52
TRPM1-207ENST00000558445 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 GNL3LQ9NVN8 582 aaKnown RBP11.82□□□□□ -0.52
TRPM1-207ENST00000558445 SKILP12757 684 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 PACS2Q86VP3 889 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 URI1O94763 535 aaPredicted RBP11.82□□□□□ -0.52
TRPM1-207ENST00000558445 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
TRPM1-207ENST00000558445 NEK4P51957 841 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 UBE2HP62256 183 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
TRPM1-207ENST00000558445 GBP3Q9H0R5 595 aa11.81□□□□□ -0.52
TRPM1-207ENST00000558445 IRF6O14896 467 aa11.81□□□□□ -0.52
TRPM1-207ENST00000558445 IBSPP21815 317 aaPredicted RBP11.81□□□□□ -0.52
TRPM1-207ENST00000558445 RBM6P78332 1123 aaKnown RBP11.81□□□□□ -0.52
TRPM1-207ENST00000558445 NAA25Q14CX7 972 aa11.81□□□□□ -0.52
TRPM1-207ENST00000558445 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
TRPM1-207ENST00000558445 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
TRPM1-207ENST00000558445 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
TRPM1-207ENST00000558445 RLBP1P12271 317 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 N4BP2L2Q92802 583 aaPredicted RBP11.8□□□□□ -0.52
TRPM1-207ENST00000558445 ITFG2Q969R8 447 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 NUP62CLQ9H1M0 184 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 PSD3Q9NYI0 1048 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 LCMT1Q9UIC8 334 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 ARMC2Q8NEN0 867 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 CCDC97Q96F63 343 aaPredicted RBP11.8□□□□□ -0.52
TRPM1-207ENST00000558445 INPP5BP32019 993 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 HDAC1Q13547 482 aaPredicted RBP11.8□□□□□ -0.52
TRPM1-207ENST00000558445 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 PLEKHG2Q9H7P9 1386 aa11.8□□□□□ -0.52
TRPM1-207ENST00000558445 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 TEX11Q8IYF3 940 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 JPH2Q9BR39 696 aaPredicted RBP11.79□□□□□ -0.52
TRPM1-207ENST00000558445 GSDMDP57764 484 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 ZSCAN25Q6NSZ9 544 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 GCC1Q96CN9 775 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 ADAM21Q9UKJ8 722 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 ELF1P32519 619 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 NAP1L1P55209 391 aaKnown RBP11.79□□□□□ -0.52
TRPM1-207ENST00000558445 CORO7P57737 925 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
TRPM1-207ENST00000558445 ST5P78524 1137 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
TRPM1-207ENST00000558445 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 RARSP54136 660 aaKnown RBP11.78□□□□□ -0.52
TRPM1-207ENST00000558445 RWDD2BP57060 319 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 TRAF1Q13077 416 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 TTC19Q6DKK2 380 aaPredicted RBP11.78□□□□□ -0.52
TRPM1-207ENST00000558445 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 LIG3P49916 1009 aa11.78□□□□□ -0.52
TRPM1-207ENST00000558445 NAIF1Q69YI7 327 aaPredicted RBP11.78□□□□□ -0.52
TRPM1-207ENST00000558445 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
TRPM1-207ENST00000558445 NAT10Q9H0A0 1025 aaKnown RBP11.78□□□□□ -0.52
TRPM1-207ENST00000558445 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.52
TRPM1-207ENST00000558445 GSCP56915 257 aaPredicted RBP11.77□□□□□ -0.52
TRPM1-207ENST00000558445 LRMPQ12912 555 aa11.77□□□□□ -0.52
TRPM1-207ENST00000558445 MCM6Q14566 821 aa11.77□□□□□ -0.52
TRPM1-207ENST00000558445 MICALCLQ6ZW33 695 aa11.77□□□□□ -0.52
TRPM1-207ENST00000558445 CEP112Q8N8E3 955 aa11.77□□□□□ -0.52
TRPM1-207ENST00000558445 CFAP53Q96M91 514 aa11.77□□□□□ -0.52
TRPM1-207ENST00000558445 ZNF446Q9NWS9 450 aa11.77□□□□□ -0.52
TRPM1-207ENST00000558445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.52
TRPM1-207ENST00000558445 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.52
TRPM1-207ENST00000558445 PPP2R1AP30153 589 aa11.77□□□□□ -0.53
TRPM1-207ENST00000558445 CABS1Q96KC9 395 aa11.77□□□□□ -0.53
TRPM1-207ENST00000558445 RPRD2Q5VT52 1461 aaKnown RBP11.77□□□□□ -0.53
TRPM1-207ENST00000558445 CEP57Q86XR8 500 aa11.77□□□□□ -0.53
TRPM1-207ENST00000558445 RSRC1Q96IZ7 334 aaKnown RBP11.77□□□□□ -0.53
TRPM1-207ENST00000558445 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
TRPM1-207ENST00000558445 EVCP57679 992 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 PDCD2Q16342 344 aaPredicted RBP11.76□□□□□ -0.53
TRPM1-207ENST00000558445 GOLGA6L7A0A1B0GV03 622 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 CAVIN2O95810 425 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 PKP1Q13835 747 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 SMC3Q9UQE7 1217 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
TRPM1-207ENST00000558445 SCP2P22307 547 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 ETAA1Q9NY74 926 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 PTPRCP08575 1304 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 CCDC158Q5M9N0 1113 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 NSFL1CQ9UNZ2 370 aaKnown RBP11.75□□□□□ -0.53
TRPM1-207ENST00000558445 CUX1P39880 1505 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 PSMD2Q13200 908 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 HDXQ7Z353 690 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 IQUBQ8NA54 791 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 NUP133Q8WUM0 1156 aa11.75□□□□□ -0.53
TRPM1-207ENST00000558445 PPFIA4O75335 1185 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms