RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 RETREG2Q8NC44 543 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 SNIP1Q8TAD8 396 aaKnown RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 CDK15Q96Q40 435 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 BACH1O14867 736 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 GTF2E1P29083 439 aaPredicted RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 CTHP32929 405 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 CCDC27Q2M243 656 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 ZNF326Q5BKZ1 582 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 SLC6A16Q9GZN6 736 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 PCDHB15Q9Y5E8 787 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 PCDHGA11Q9Y5H2 935 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 C21orf2O43822 256 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 SKIP12755 728 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAM161AQ3B820 660 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 ESCO1Q5FWF5 840 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 SND1Q7KZF4 910 aaKnown RBP eCLIP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 ZBTB24O43167 697 aaPredicted RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 SSFA2P28290 1259 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 BPHLQ86WA6 291 aaPredicted RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 CLP1Q92989 425 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 ARHGAP9Q9BRR9 750 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAM13BQ9NYF5 915 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 RPLP1P05386 114 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 CANXP27824 592 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 WEE1P30291 646 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 MFAP1P55081 439 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 VAC14Q08AM6 782 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 ALKBH2Q6NS38 261 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 TRIM46Q7Z4K8 759 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAM174AQ8TBP5 190 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 ALKBH8Q96BT7 664 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 FRMD6Q96NE9 622 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 EVA1BQ9NVM1 165 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 TFIP11Q9UBB9 837 aaKnown RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 PCDHB9Q9Y5E1 797 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 MAFBQ9Y5Q3 323 aaPredicted RBP2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 VPS13DQ5THJ4 4388 aa2.17□□□□□ -2.06
CTDSPL2-202ENST00000558373 RNF40O75150 1001 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 HIF1AQ16665 826 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 ZSCAN29Q8IWY8 852 aaPredicted RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 NOVA2Q9UNW9 492 aaKnown RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 AXIN1O15169 862 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 SF3B2Q13435 895 aaKnown RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 COL9A3Q14050 684 aaPredicted RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 NR6A1Q15406 480 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 KIFC2Q96AC6 838 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 VTI1AQ96AJ9 217 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 CITED4Q96RK1 184 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 DNAAF2Q9NVR5 837 aaKnown RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 EIF4G1Q04637 1599 aaKnown RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 FUT2Q10981 343 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 DIEXFQ68CQ4 756 aaKnown RBP2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 HPS1Q92902 700 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 SPSB2Q99619 263 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 DOLKQ9UPQ8 538 aa2.16□□□□□ -2.06
CTDSPL2-202ENST00000558373 SKOR1P84550 965 aa2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 PTK7Q13308 1070 aa2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 NBPF20Q3BBV1 942 aa2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 ANKMY2Q8IV38 441 aa2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 NBPF15Q8N660 670 aa2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 NXF1Q9UBU9 619 aaKnown RBP2.15□□□□□ -2.06
CTDSPL2-202ENST00000558373 C11orf95C9JLR9 678 aaPredicted RBP2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 PTPN12Q05209 780 aaKnown RBP2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 ZSCAN1Q8NBB4 408 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 FAM129BQ96TA1 746 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 NUDT12Q9BQG2 462 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 CEP126Q9P2H0 1117 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L5A8MUK1 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L15C9J2P7 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L10C9JJH3 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L13C9JLJ4 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L12C9JPN9 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L11C9JVI0 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L21D6R901 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L18D6R9N7 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L22D6RA61 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L17D6RBQ6 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L19D6RCP7 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L20D6RJB6 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 J3QL48 77 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 PCSK2P16519 638 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 SEC13P55735 322 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L24Q0WX57 530 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 PLPP7Q8NBV4 271 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 LRRN4Q8WUT4 740 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 SENP2Q9HC62 589 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 SLC27A5Q9Y2P5 690 aa2.15□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L3A6NCW0 530 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L4A6NCW7 530 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 ITGB2P05107 769 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 VARSP26640 1264 aaKnown RBP2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L2Q6R6M4 530 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 USP17L1Q7RTZ2 530 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 SLC10A4Q96EP9 437 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 SHROOM4Q9ULL8 1493 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 FOXO3O43524 673 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 IGSF3O75054 1194 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 RASA1P20936 1047 aa2.14□□□□□ -2.07
CTDSPL2-202ENST00000558373 PRDM9Q9NQV7 894 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms